RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 TMEM243Q9BU79 118 aa8.23□□□□□ -1.09
SCARB1-207ENST00000541661 RAB5CP51148 216 aa8.22□□□□□ -1.09
SCARB1-207ENST00000541661 SUMO4Q6EEV6 95 aa8.22□□□□□ -1.09
SCARB1-207ENST00000541661 C15orf56Q8N910 161 aa8.22□□□□□ -1.09
SCARB1-207ENST00000541661 NDUFS6O75380 124 aaKnown RBP8.21□□□□□ -1.1
SCARB1-207ENST00000541661 MGPP08493 103 aa8.21□□□□□ -1.1
SCARB1-207ENST00000541661 IGLC6P0CF74 106 aa8.21□□□□□ -1.1
SCARB1-207ENST00000541661 RPS10P46783 165 aaKnown RBP8.21□□□□□ -1.1
SCARB1-207ENST00000541661 PRR3P79522 188 aaKnown RBP8.21□□□□□ -1.1
SCARB1-207ENST00000541661 COX6A2Q02221 97 aa8.21□□□□□ -1.1
SCARB1-207ENST00000541661 EIF5AL1Q6IS14 154 aaKnown RBP8.21□□□□□ -1.1
SCARB1-207ENST00000541661 WDR73Q6P4I2 378 aa8.21□□□□□ -1.1
SCARB1-207ENST00000541661 CFAP161Q6P656 301 aa8.21□□□□□ -1.1
SCARB1-207ENST00000541661 RASL11AQ6T310 242 aa8.21□□□□□ -1.1
SCARB1-207ENST00000541661 ALKAL2Q6UX46 152 aa8.21□□□□□ -1.1
SCARB1-207ENST00000541661 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
SCARB1-207ENST00000541661 SFT2D1Q8WV19 159 aa8.2□□□□□ -1.1
SCARB1-207ENST00000541661 NIT2Q9NQR4 276 aa8.2□□□□□ -1.1
SCARB1-207ENST00000541661 A0A0J9YXV3 536 aa8.19□□□□□ -1.1
SCARB1-207ENST00000541661 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
SCARB1-207ENST00000541661 CACNG7P62955 275 aa8.19□□□□□ -1.1
SCARB1-207ENST00000541661 FER1L6-AS1Q8NA97 138 aa8.19□□□□□ -1.1
SCARB1-207ENST00000541661 PRSS3P2Q8NHM4 247 aa8.19□□□□□ -1.1
SCARB1-207ENST00000541661 GTSF1Q8WW33 167 aa8.19□□□□□ -1.1
SCARB1-207ENST00000541661 UMAD1C9J7I0 102 aa8.18□□□□□ -1.1
SCARB1-207ENST00000541661 UBE2L6O14933 153 aa8.18□□□□□ -1.1
SCARB1-207ENST00000541661 RPL35P42766 123 aaKnown RBP8.18□□□□□ -1.1
SCARB1-207ENST00000541661 SULT1A2P50226 295 aa8.18□□□□□ -1.1
SCARB1-207ENST00000541661 RPS20P60866 119 aaKnown RBP8.18□□□□□ -1.1
SCARB1-207ENST00000541661 ODF1Q14990 250 aa8.18□□□□□ -1.1
SCARB1-207ENST00000541661 MAJINQ3KP22 176 aa8.18□□□□□ -1.1
SCARB1-207ENST00000541661 STPG4Q8N801 248 aa8.18□□□□□ -1.1
SCARB1-207ENST00000541661 C19orf71A6NCJ1 209 aa8.17□□□□□ -1.1
SCARB1-207ENST00000541661 F2Z2F3 143 aa8.17□□□□□ -1.1
SCARB1-207ENST00000541661 COTL1Q14019 142 aa8.17□□□□□ -1.1
SCARB1-207ENST00000541661 SPINK6Q6UWN8 80 aa8.17□□□□□ -1.1
SCARB1-207ENST00000541661 COMMD7Q86VX2 200 aa8.17□□□□□ -1.1
SCARB1-207ENST00000541661 FAM213BQ8TBF2 198 aa8.17□□□□□ -1.1
SCARB1-207ENST00000541661 TPPP3Q9BW30 176 aa8.17□□□□□ -1.1
SCARB1-207ENST00000541661 GVQW2A0A096LPI5 108 aaPredicted RBP8.16□□□□□ -1.1
SCARB1-207ENST00000541661 IGKV2-24A0A0C4DH68 120 aa8.16□□□□□ -1.1
SCARB1-207ENST00000541661 A0A1B0GV50 99 aa8.16□□□□□ -1.1
SCARB1-207ENST00000541661 TRGC1P0CF51 173 aa8.16□□□□□ -1.1
SCARB1-207ENST00000541661 AMTP48728 403 aa8.16□□□□□ -1.1
SCARB1-207ENST00000541661 OR2D3Q8NGH3 330 aa8.16□□□□□ -1.1
SCARB1-207ENST00000541661 LYPD6BQ8NI32 183 aa8.16□□□□□ -1.1
SCARB1-207ENST00000541661 C11orf52Q96A22 123 aa8.16□□□□□ -1.1
SCARB1-207ENST00000541661 RAB19A4D1S5 217 aa8.15□□□□□ -1.1
SCARB1-207ENST00000541661 BLOC1S1P78537 153 aa8.15□□□□□ -1.1
SCARB1-207ENST00000541661 SRSF9Q13242 221 aaKnown RBP eCLIP8.15□□□□□ -1.1
SCARB1-207ENST00000541661 HIGD2BQ4VC39 106 aa8.15□□□□□ -1.1
SCARB1-207ENST00000541661 REG3GQ6UW15 175 aa8.15□□□□□ -1.1
SCARB1-207ENST00000541661 UQCC3Q6UW78 93 aa8.15□□□□□ -1.1
SCARB1-207ENST00000541661 CHCHD10Q8WYQ3 142 aaPredicted RBP8.15□□□□□ -1.1
SCARB1-207ENST00000541661 LINC00474Q9P2X8 69 aa8.15□□□□□ -1.1
SCARB1-207ENST00000541661 A0A096LNI7 61 aa8.14□□□□□ -1.11
SCARB1-207ENST00000541661 XKRY2A2RUG3 117 aa8.14□□□□□ -1.11
SCARB1-207ENST00000541661 H2AFB1P0C5Y9 115 aa8.14□□□□□ -1.11
SCARB1-207ENST00000541661 NTF3P20783 257 aa8.14□□□□□ -1.11
SCARB1-207ENST00000541661 SMIM12Q96EX1 92 aa8.14□□□□□ -1.11
SCARB1-207ENST00000541661 IGKV3OR2-268A0A0C4DH90 116 aa8.13□□□□□ -1.11
SCARB1-207ENST00000541661 H7C423 109 aa8.13□□□□□ -1.11
SCARB1-207ENST00000541661 CENPWQ5EE01 88 aa8.13□□□□□ -1.11
SCARB1-207ENST00000541661 LYZL1Q6UWQ5 148 aa8.13□□□□□ -1.11
SCARB1-207ENST00000541661 MANBALQ9NQG1 85 aa8.13□□□□□ -1.11
SCARB1-207ENST00000541661 TEX46H3BTG2 121 aa8.12□□□□□ -1.11
SCARB1-207ENST00000541661 FOXI1Q12951 378 aa8.12□□□□□ -1.11
SCARB1-207ENST00000541661 GATD1Q8NB37 220 aa8.12□□□□□ -1.11
SCARB1-207ENST00000541661 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
SCARB1-207ENST00000541661 NCR2O95944 276 aa8.11□□□□□ -1.11
SCARB1-207ENST00000541661 IFNA1P01562 189 aa8.11□□□□□ -1.11
SCARB1-207ENST00000541661 CCL20P78556 96 aa8.11□□□□□ -1.11
SCARB1-207ENST00000541661 AMMECR1LQ6DCA0 310 aa8.11□□□□□ -1.11
SCARB1-207ENST00000541661 Q6ZRP5 223 aa8.11□□□□□ -1.11
SCARB1-207ENST00000541661 CNFNQ9BYD5 112 aa8.11□□□□□ -1.11
SCARB1-207ENST00000541661 TRAV1-1A0A0B4J248 108 aa8.1□□□□□ -1.11
SCARB1-207ENST00000541661 CTRLP40313 264 aa8.1□□□□□ -1.11
SCARB1-207ENST00000541661 GNG4P50150 75 aa8.1□□□□□ -1.11
SCARB1-207ENST00000541661 GNG13Q9P2W3 67 aa8.1□□□□□ -1.11
SCARB1-207ENST00000541661 LPAP08519 4548 aa8.1□□□□□ -1.11
SCARB1-207ENST00000541661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.09□□□□□ -1.11
SCARB1-207ENST00000541661 IGKV2-29A2NJV5 120 aaPredicted RBP8.09□□□□□ -1.11
SCARB1-207ENST00000541661 GAS8-AS1O95177 125 aa8.09□□□□□ -1.11
SCARB1-207ENST00000541661 TWIST1Q15672 202 aa8.09□□□□□ -1.11
SCARB1-207ENST00000541661 RNASEKQ6P5S7 137 aaKnown RBP8.09□□□□□ -1.11
SCARB1-207ENST00000541661 OR5A1Q8NGJ0 315 aa8.09□□□□□ -1.11
SCARB1-207ENST00000541661 BIN3Q9NQY0 253 aa8.09□□□□□ -1.11
SCARB1-207ENST00000541661 TRBV20OR9-2A0A075B6H5 130 aa8.08□□□□□ -1.12
SCARB1-207ENST00000541661 TRAV26-2A0A0B4J265 109 aa8.08□□□□□ -1.12
SCARB1-207ENST00000541661 IGHV1-58A0A0C4DH39 117 aa8.08□□□□□ -1.12
SCARB1-207ENST00000541661 FGF6P10767 208 aa8.08□□□□□ -1.12
SCARB1-207ENST00000541661 ZNF25P17030 456 aaPredicted RBP8.08□□□□□ -1.12
SCARB1-207ENST00000541661 C10orf91Q5T1B1 145 aa8.08□□□□□ -1.12
SCARB1-207ENST00000541661 NUDT10Q8NFP7 164 aa8.08□□□□□ -1.12
SCARB1-207ENST00000541661 NUDT11Q96G61 164 aa8.08□□□□□ -1.12
SCARB1-207ENST00000541661 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
SCARB1-207ENST00000541661 APCSP02743 223 aa8.07□□□□□ -1.12
SCARB1-207ENST00000541661 RPL39LQ96EH5 51 aaKnown RBP8.07□□□□□ -1.12
SCARB1-207ENST00000541661 CARD19Q96LW7 228 aa8.07□□□□□ -1.12
SCARB1-207ENST00000541661 LINC00959A0A1B0GUT2 108 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms