RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 UBE2G1P62253 170 aa4.77□□□□□ -1.65
LRP6-204ENST00000540415 C9orf116Q5BN46 136 aaPredicted RBP4.77□□□□□ -1.65
LRP6-204ENST00000540415 DIRC1Q969H9 104 aa4.77□□□□□ -1.65
LRP6-204ENST00000540415 HIST1H2BAQ96A08 127 aa4.77□□□□□ -1.65
LRP6-204ENST00000540415 FMC1Q96HJ9 113 aa4.77□□□□□ -1.65
LRP6-204ENST00000540415 ACTR3CQ9C0K3 210 aaPredicted RBP4.77□□□□□ -1.65
LRP6-204ENST00000540415 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
LRP6-204ENST00000540415 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.76□□□□□ -1.65
LRP6-204ENST00000540415 IGKV2-29A2NJV5 120 aaPredicted RBP4.76□□□□□ -1.65
LRP6-204ENST00000540415 OR5AL1P0C617 328 aa4.76□□□□□ -1.65
LRP6-204ENST00000540415 SYCNQ0VAF6 134 aa4.76□□□□□ -1.65
LRP6-204ENST00000540415 AP1S3Q96PC3 154 aa4.76□□□□□ -1.65
LRP6-204ENST00000540415 PSMG3Q9BT73 122 aaPredicted RBP4.76□□□□□ -1.65
LRP6-204ENST00000540415 CCL25O15444 150 aa4.75□□□□□ -1.65
LRP6-204ENST00000540415 DEFA1P59665 94 aa4.75□□□□□ -1.65
LRP6-204ENST00000540415 Q6ZNX1 250 aa4.75□□□□□ -1.65
LRP6-204ENST00000540415 PGLYRP4Q96LB8 373 aa4.75□□□□□ -1.65
LRP6-204ENST00000540415 IGLV4-69A0A075B6H9 119 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 A0A087WZ39 114 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 IGHV1-58A0A0C4DH39 117 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 LOC107984640A0A0U1RRK4 108 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.74□□□□□ -1.65
LRP6-204ENST00000540415 MBP02144 154 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 CXCL1P09341 107 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 PET100P0DJ07 73 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 AKR1C3P42330 323 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 MEF2BQ02080 365 aaPredicted RBP4.74□□□□□ -1.65
LRP6-204ENST00000540415 COTL1Q14019 142 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 RNASEKQ6P5S7 137 aaKnown RBP4.74□□□□□ -1.65
LRP6-204ENST00000540415 RASL11AQ6T310 242 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 TPPP3Q9BW30 176 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 TNFSF18Q9UNG2 199 aa4.74□□□□□ -1.65
LRP6-204ENST00000540415 CTXND1A0A1B0GTU2 59 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 FAM168BA1KXE4 195 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 ZNF561-AS1K7EIQ3 104 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 CAMPP49913 170 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 UBE2D1P51668 147 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 EIF5AP63241 154 aaKnown RBP4.73□□□□□ -1.65
LRP6-204ENST00000540415 SERF2P84101 59 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 RPL18AQ02543 176 aaKnown RBP4.73□□□□□ -1.65
LRP6-204ENST00000540415 AMMECR1LQ6DCA0 310 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 NUP35Q8NFH5 326 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 OPRPNQ99935 248 aaPredicted RBP4.73□□□□□ -1.65
LRP6-204ENST00000540415 MLST8Q9BVC4 326 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 NIT2Q9NQR4 276 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 PKIGQ9Y2B9 76 aa4.73□□□□□ -1.65
LRP6-204ENST00000540415 TRAV1-1A0A0B4J248 108 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 LINC00959A0A1B0GUT2 108 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 INMT-MINDY4F8WBC2 141 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 SSNA1O43805 119 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 FGF6P10767 208 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 NTF3P20783 257 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 CST9LP1Q5W188 147 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 OR5A1Q8NGJ0 315 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 ENKURQ8TC29 256 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 RETNLBQ9BQ08 111 aa4.72□□□□□ -1.65
LRP6-204ENST00000540415 NKX6-2Q9C056 277 aaPredicted RBP4.72□□□□□ -1.65
LRP6-204ENST00000540415 SCO2A0A1W2PP80 73 aa4.71□□□□□ -1.66
LRP6-204ENST00000540415 APOMO95445 188 aa4.71□□□□□ -1.66
LRP6-204ENST00000540415 IGLC6P0CF74 106 aa4.71□□□□□ -1.66
LRP6-204ENST00000540415 RPL7L1Q6DKI1 246 aaKnown RBP4.71□□□□□ -1.66
LRP6-204ENST00000540415 BAGE2Q86Y30 109 aa4.71□□□□□ -1.66
LRP6-204ENST00000540415 KRTAP7-1Q8IUC3 87 aa4.71□□□□□ -1.66
LRP6-204ENST00000540415 STOML3Q8TAV4 291 aa4.71□□□□□ -1.66
LRP6-204ENST00000540415 RPL39LQ96EH5 51 aaKnown RBP4.71□□□□□ -1.66
LRP6-204ENST00000540415 CCDC32Q9BV29 185 aa4.71□□□□□ -1.66
LRP6-204ENST00000540415 MAP1LC3B2A6NCE7 125 aa4.7□□□□□ -1.66
LRP6-204ENST00000540415 RPL13AP40429 203 aaKnown RBP4.7□□□□□ -1.66
LRP6-204ENST00000540415 GATD1Q8NB37 220 aa4.7□□□□□ -1.66
LRP6-204ENST00000540415 CAMK2N2Q96S95 79 aa4.7□□□□□ -1.66
LRP6-204ENST00000540415 MAP1LC3BQ9GZQ8 125 aa4.7□□□□□ -1.66
LRP6-204ENST00000540415 MED28Q9H204 178 aa4.7□□□□□ -1.66
LRP6-204ENST00000540415 A0A087X002 238 aa4.69□□□□□ -1.66
LRP6-204ENST00000540415 BCL2L11O43521 198 aa4.69□□□□□ -1.66
LRP6-204ENST00000540415 PAGE4O60829 102 aa4.69□□□□□ -1.66
LRP6-204ENST00000540415 IFITM3Q01628 133 aa4.69□□□□□ -1.66
LRP6-204ENST00000540415 Q5BKY6 102 aa4.69□□□□□ -1.66
LRP6-204ENST00000540415 CD164L2Q6UWJ8 174 aa4.69□□□□□ -1.66
LRP6-204ENST00000540415 FAM19A5Q7Z5A7 132 aaPredicted RBP4.69□□□□□ -1.66
LRP6-204ENST00000540415 ISOC2Q96AB3 205 aa4.69□□□□□ -1.66
LRP6-204ENST00000540415 A0A1B0GV50 99 aa4.68□□□□□ -1.66
LRP6-204ENST00000540415 APCSP02743 223 aa4.68□□□□□ -1.66
LRP6-204ENST00000540415 FHITP49789 147 aa4.68□□□□□ -1.66
LRP6-204ENST00000540415 LYZL1Q6UWQ5 148 aa4.68□□□□□ -1.66
LRP6-204ENST00000540415 RPP21Q9H633 154 aaKnown RBP4.68□□□□□ -1.66
LRP6-204ENST00000540415 MALP21145 153 aa4.67□□□□□ -1.66
LRP6-204ENST00000540415 FOXA3P55318 350 aaPredicted RBP4.67□□□□□ -1.66
LRP6-204ENST00000540415 SS18Q15532 418 aa4.67□□□□□ -1.66
LRP6-204ENST00000540415 ANKRD39Q53RE8 183 aa4.67□□□□□ -1.66
LRP6-204ENST00000540415 AKR1C8PQ5T2L2 129 aa4.67□□□□□ -1.66
LRP6-204ENST00000540415 OR2D3Q8NGH3 330 aa4.67□□□□□ -1.66
LRP6-204ENST00000540415 TCEAL7Q9BRU2 100 aa4.67□□□□□ -1.66
LRP6-204ENST00000540415 MARVELD1Q9BSK0 173 aa4.67□□□□□ -1.66
LRP6-204ENST00000540415 KRTAP4-1Q9BYQ7 146 aa4.67□□□□□ -1.66
LRP6-204ENST00000540415 CDIP1Q9H305 208 aa4.67□□□□□ -1.66
LRP6-204ENST00000540415 CARHSP1Q9Y2V2 147 aaKnown RBP4.67□□□□□ -1.66
LRP6-204ENST00000540415 H7C423 109 aa4.66□□□□□ -1.66
LRP6-204ENST00000540415 COX7A2LO14548 114 aa4.66□□□□□ -1.66
LRP6-204ENST00000540415 NCR2O95944 276 aa4.66□□□□□ -1.66
LRP6-204ENST00000540415 ZNF25P17030 456 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms