RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 FRZBQ92765 325 aa9.93□□□□□ -0.82
UBE3B-212ENST00000540230 RMI2Q96E14 147 aa9.93□□□□□ -0.82
UBE3B-212ENST00000540230 TMEM243Q9BU79 118 aa9.93□□□□□ -0.82
UBE3B-212ENST00000540230 TMEM191AQ9H0A3 160 aa9.93□□□□□ -0.82
UBE3B-212ENST00000540230 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 CRPP02741 224 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 GCSHP23434 173 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 PKIAP61925 76 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 Q0VG73 95 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 COTL1Q14019 142 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 C20orf203Q8NBC4 194 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 PRR34Q9NV39 138 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 COX11Q9Y6N1 276 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.92□□□□□ -0.82
UBE3B-212ENST00000540230 RPS10P46783 165 aaKnown RBP9.92□□□□□ -0.82
UBE3B-212ENST00000540230 XGP55808 180 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 LINC00269Q8N2A0 174 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 NTN5Q8WTR8 489 aaPredicted RBP9.92□□□□□ -0.82
UBE3B-212ENST00000540230 C1orf43Q9BWL3 253 aa9.92□□□□□ -0.82
UBE3B-212ENST00000540230 SMIM27A0A1W2PRY6 76 aa9.91□□□□□ -0.82
UBE3B-212ENST00000540230 SDHAF1A6NFY7 115 aa9.91□□□□□ -0.82
UBE3B-212ENST00000540230 RAB4AP20338 218 aa9.91□□□□□ -0.82
UBE3B-212ENST00000540230 AMTP48728 403 aa9.91□□□□□ -0.82
UBE3B-212ENST00000540230 NAT8BQ9UHF3 227 aa9.91□□□□□ -0.82
UBE3B-212ENST00000540230 SMKR1H3BMG3 65 aa9.9□□□□□ -0.82
UBE3B-212ENST00000540230 HAMPP81172 84 aa9.9□□□□□ -0.82
UBE3B-212ENST00000540230 IFITM2Q01629 132 aa9.9□□□□□ -0.82
UBE3B-212ENST00000540230 RIGQ13278 110 aa9.9□□□□□ -0.82
UBE3B-212ENST00000540230 TRBV6-5A0A0K0K1A5 114 aa9.89□□□□□ -0.83
UBE3B-212ENST00000540230 NCR2O95944 276 aa9.89□□□□□ -0.83
UBE3B-212ENST00000540230 MIAQ16674 131 aa9.89□□□□□ -0.83
UBE3B-212ENST00000540230 KRTAP26-1Q6PEX3 210 aa9.89□□□□□ -0.83
UBE3B-212ENST00000540230 A0A1B0GUV1 79 aa9.88□□□□□ -0.83
UBE3B-212ENST00000540230 RAB14P61106 215 aa9.88□□□□□ -0.83
UBE3B-212ENST00000540230 REG3AQ06141 175 aa9.88□□□□□ -0.83
UBE3B-212ENST00000540230 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-212ENST00000540230 IGKV2-29A2NJV5 120 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-212ENST00000540230 UBE2L6O14933 153 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 HLA-DQA1P01909 254 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 LINC01620Q4KN68 170 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 CLLU1Q5K131 121 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 Q8N1X5 172 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 TMEM70Q9BUB7 260 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 FAM30AQ9NZY2 134 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 CAMPP49913 170 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 MRAP2Q96G30 205 aa9.87□□□□□ -0.83
UBE3B-212ENST00000540230 I3L3M4 83 aa9.86□□□□□ -0.83
UBE3B-212ENST00000540230 TSHBP01222 138 aa9.86□□□□□ -0.83
UBE3B-212ENST00000540230 APCSP02743 223 aa9.86□□□□□ -0.83
UBE3B-212ENST00000540230 PMCHP20382 165 aa9.86□□□□□ -0.83
UBE3B-212ENST00000540230 POLR2KP53803 58 aaKnown RBP9.86□□□□□ -0.83
UBE3B-212ENST00000540230 MRPL54Q6P161 138 aaKnown RBP9.86□□□□□ -0.83
UBE3B-212ENST00000540230 NRACQ8N912 160 aa9.86□□□□□ -0.83
UBE3B-212ENST00000540230 ST20Q9HBF5 79 aa9.86□□□□□ -0.83
UBE3B-212ENST00000540230 TMEM242Q9NWH2 141 aa9.86□□□□□ -0.83
UBE3B-212ENST00000540230 MRPL51Q4U2R6 128 aaKnown RBP9.85□□□□□ -0.83
UBE3B-212ENST00000540230 FAM104BQ5XKR9 115 aa9.85□□□□□ -0.83
UBE3B-212ENST00000540230 A0A1B0GXF2 115 aa9.84□□□□□ -0.83
UBE3B-212ENST00000540230 USP17L23D6RBM5 183 aa9.84□□□□□ -0.83
UBE3B-212ENST00000540230 ESDP10768 282 aa9.83□□□□□ -0.84
UBE3B-212ENST00000540230 IGKV3OR2-268A0A0C4DH90 116 aa9.82□□□□□ -0.84
UBE3B-212ENST00000540230 TRBV27A0A0K0K1C4 114 aa9.82□□□□□ -0.84
UBE3B-212ENST00000540230 FGF6P10767 208 aa9.82□□□□□ -0.84
UBE3B-212ENST00000540230 RNASEKQ6P5S7 137 aaKnown RBP9.82□□□□□ -0.84
UBE3B-212ENST00000540230 VPS13BQ7Z7G8 4022 aa9.82□□□□□ -0.84
UBE3B-212ENST00000540230 PRSS1P07477 247 aa9.82□□□□□ -0.84
UBE3B-212ENST00000540230 ADCYAP1P18509 176 aa9.82□□□□□ -0.84
UBE3B-212ENST00000540230 HBBP68871 147 aa9.82□□□□□ -0.84
UBE3B-212ENST00000540230 AMMECR1LQ6DCA0 310 aa9.82□□□□□ -0.84
UBE3B-212ENST00000540230 A0A1B0GW15 77 aa9.81□□□□□ -0.84
UBE3B-212ENST00000540230 SMR3BP02814 79 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-212ENST00000540230 SUMO2P61956 95 aaKnown RBP9.81□□□□□ -0.84
UBE3B-212ENST00000540230 PNRC1Q12796 327 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-212ENST00000540230 Q6ZSA8 131 aa9.81□□□□□ -0.84
UBE3B-212ENST00000540230 TRAV8-4A0A0B4J246 113 aa9.8□□□□□ -0.84
UBE3B-212ENST00000540230 H7C423 109 aa9.8□□□□□ -0.84
UBE3B-212ENST00000540230 PPP1R2P9O14990 202 aa9.79□□□□□ -0.84
UBE3B-212ENST00000540230 C14orf177Q52M58 125 aa9.79□□□□□ -0.84
UBE3B-212ENST00000540230 D6R8Y8 96 aa9.78□□□□□ -0.84
UBE3B-212ENST00000540230 VCYO14598 125 aa9.78□□□□□ -0.84
UBE3B-212ENST00000540230 CKS2P33552 79 aa9.78□□□□□ -0.84
UBE3B-212ENST00000540230 C7orf77A4D0Y5 90 aa9.77□□□□□ -0.84
UBE3B-212ENST00000540230 LINC00862A6NCI5 91 aa9.77□□□□□ -0.84
UBE3B-212ENST00000540230 PPP1R17O96001 155 aa9.77□□□□□ -0.84
UBE3B-212ENST00000540230 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.84
UBE3B-212ENST00000540230 ANAPC16Q96DE5 110 aa9.77□□□□□ -0.84
UBE3B-212ENST00000540230 TRBV24-1A0A075B6N3 115 aa9.77□□□□□ -0.85
UBE3B-212ENST00000540230 GAGE12HA6NDE8 117 aa9.77□□□□□ -0.85
UBE3B-212ENST00000540230 EPM2AB3EWF7 344 aa9.77□□□□□ -0.85
UBE3B-212ENST00000540230 TNFRSF6BO95407 300 aa9.77□□□□□ -0.85
UBE3B-212ENST00000540230 NPYP01303 97 aa9.77□□□□□ -0.85
UBE3B-212ENST00000540230 MT-ND4LP03901 98 aa9.77□□□□□ -0.85
UBE3B-212ENST00000540230 S100A8P05109 93 aa9.77□□□□□ -0.85
UBE3B-212ENST00000540230 ATP5L2Q7Z4Y8 100 aa9.77□□□□□ -0.85
UBE3B-212ENST00000540230 TMEM218A2RU14 115 aa9.76□□□□□ -0.85
UBE3B-212ENST00000540230 F8W036 122 aa9.76□□□□□ -0.85
UBE3B-212ENST00000540230 FCER1GP30273 86 aa9.76□□□□□ -0.85
UBE3B-212ENST00000540230 Q5VSD8 79 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms