RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ADARB2-AS1A8MUL3 147 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 AVPP01185 164 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
DDB1-217ENST00000540166 TMEM219Q86XT9 240 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 MDFICQ9P1T7 246 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 RAI1Q7Z5J4 1906 aaPredicted RBP6.58□□□□□ -1.36
DDB1-217ENST00000540166 DNAL4O96015 105 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 CLEC19AQ6UXS0 136 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 TIMM21Q9BVV7 248 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 IGLV2-18A0A075B6J9 118 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
DDB1-217ENST00000540166 CLEC2BQ92478 149 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 TRAV41A0A0B4J266 112 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 TRIAP1O43715 76 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 LEPROTO15243 131 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 BRI3O95415 125 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 LINC00643Q86TS7 51 aa6.57□□□□□ -1.36
DDB1-217ENST00000540166 ATP5G1P05496 136 aa6.56□□□□□ -1.36
DDB1-217ENST00000540166 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
DDB1-217ENST00000540166 C15orf32Q32M92 178 aa6.56□□□□□ -1.36
DDB1-217ENST00000540166 DGAT2L7PQ6IED9 249 aa6.56□□□□□ -1.36
DDB1-217ENST00000540166 RBAKDNA6NC62 111 aa6.56□□□□□ -1.36
DDB1-217ENST00000540166 LINC01546A6NGU7 62 aa6.56□□□□□ -1.36
DDB1-217ENST00000540166 ATOX1O00244 68 aa6.56□□□□□ -1.36
DDB1-217ENST00000540166 IMUPQ9GZP8 106 aa6.56□□□□□ -1.36
DDB1-217ENST00000540166 SDHAF1A6NFY7 115 aa6.56□□□□□ -1.36
DDB1-217ENST00000540166 KRTAP1-1Q07627 177 aa6.56□□□□□ -1.36
DDB1-217ENST00000540166 NIPBLQ6KC79 2804 aaeCLIP6.55□□□□□ -1.36
DDB1-217ENST00000540166 A0A087WWL8 130 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 A0A0U1RRA0 63 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 TNFRSF13BO14836 293 aaPredicted RBP6.55□□□□□ -1.36
DDB1-217ENST00000540166 RS1O15537 224 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 KLK5Q9Y337 293 aaPredicted RBP6.55□□□□□ -1.36
DDB1-217ENST00000540166 TRBV30A0A0K0K1B3 111 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 CRYGBP07316 175 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 CD28P10747 220 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 TRAV13-1A0A0B4J241 112 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 MINOS1Q5TGZ0 78 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 EEF1AKMT3Q96AZ1 226 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 MINOS1-NBL1R4GNA1 71 aa6.55□□□□□ -1.36
DDB1-217ENST00000540166 FAM240AA0A1B0GVK7 77 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 hADV29S1A0JD25 119 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 INAFM2P0DMQ5 153 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 TMEM263Q8WUH6 116 aaKnown RBP6.54□□□□□ -1.36
DDB1-217ENST00000540166 COPS9Q8WXC6 57 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 NDUFA12Q9UI09 145 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 TACC2O95359 2948 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 Q6YL49 198 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 RELNP78509 3460 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 H7C423 109 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
DDB1-217ENST00000540166 NDPQ00604 133 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
DDB1-217ENST00000540166 A0A1B0GX51 115 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 TMEM89A2RUT3 159 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 MRGPRG-AS1Q2M3A8 158 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 LINC00477Q96M19 166 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 ADGRG4Q8IZF6 3080 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 F5H768 121 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 LINC00526Q96FQ7 95 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 FANCD2OSQ96PS1 177 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 TIMM17AQ99595 171 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 NSD1Q96L73 2696 aaPredicted RBP6.53□□□□□ -1.36
DDB1-217ENST00000540166 IGLV11-55A0A075B6I3 123 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 TRAV25A0A0B4J276 109 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 COX7CP15954 63 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 HIST1H4AP62805 103 aaKnown RBP6.53□□□□□ -1.36
DDB1-217ENST00000540166 COX8CQ7Z4L0 72 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 LINC01587Q99440 93 aa6.53□□□□□ -1.36
DDB1-217ENST00000540166 A0A0J9YXV3 536 aa6.52□□□□□ -1.37
DDB1-217ENST00000540166 CTSGP08311 255 aa6.52□□□□□ -1.37
DDB1-217ENST00000540166 C11orf21Q9P2W6 132 aa6.52□□□□□ -1.37
DDB1-217ENST00000540166 C1orf43Q9BWL3 253 aa6.52□□□□□ -1.37
DDB1-217ENST00000540166 A0A096LNT2 108 aa6.52□□□□□ -1.37
DDB1-217ENST00000540166 ZNF876PQ49A33 203 aa6.52□□□□□ -1.37
DDB1-217ENST00000540166 TRBV7-7A0A0K0K1E9 115 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 OVOL1O14753 267 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 SYNJ2BPP57105 145 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 TSPEAR-AS2P59090 65 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 RHOHQ15669 191 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 C9orf139Q6ZV77 190 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 SIRPDQ9H106 197 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 IGHV7-4-1A0A0J9YVY3 117 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 BAALC-AS2P0C853 105 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 HTN1P15515 57 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 LY6G5BQ8NDX9 201 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 MRAPQ8TCY5 172 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 CITED2Q99967 270 aaPredicted RBP6.51□□□□□ -1.37
DDB1-217ENST00000540166 A0A0J9YXY3 114 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 GNRH2O43555 120 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 MOB4Q9Y3A3 225 aa6.51□□□□□ -1.37
DDB1-217ENST00000540166 ZFHX4Q86UP3 3567 aa6.5□□□□□ -1.37
DDB1-217ENST00000540166 G3V318 75 aa6.5□□□□□ -1.37
DDB1-217ENST00000540166 BUB3O43684 328 aa6.5□□□□□ -1.37
DDB1-217ENST00000540166 LINC01006Q8NI28 216 aa6.5□□□□□ -1.37
DDB1-217ENST00000540166 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
DDB1-217ENST00000540166 SMAD5-AS1Q9Y6J3 95 aa6.5□□□□□ -1.37
DDB1-217ENST00000540166 I3L3M4 83 aa6.5□□□□□ -1.37
DDB1-217ENST00000540166 LST1O00453 97 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 ATP6V0E1O15342 81 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms