RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 NOTCH3Q9UM47 2321 aa5.71□□□□□ -1.49
CCDC60-204ENST00000539847 IGLV4-69A0A075B6H9 119 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 LEPROTO15243 131 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 IGHV1-69P01742 117 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 IGHV4-38-2P0DP08 117 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 CRIP2P52943 208 aaPredicted RBP5.71□□□□□ -1.5
CCDC60-204ENST00000539847 NDPQ00604 133 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 GAGE2BQ13066 116 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 RHOHQ15669 191 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 ZNF876PQ49A33 203 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 GAGE2EQ4V326 116 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 SERTAD4-AS1Q5TG53 156 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 VMO1Q7Z5L0 202 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 Q8N9W7 124 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 ANAPC13Q9BS18 74 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 GAGE2DQ9UEU5 116 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 KIF25-AS1Q9Y6Z4 181 aa5.71□□□□□ -1.5
CCDC60-204ENST00000539847 NBEAL2Q6ZNJ1 2754 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 TRBV30A0A0K0K1B3 111 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 GAGE12JA6NER3 117 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 SDHAF1A6NFY7 115 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 FAM223BA6NKX1 122 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 USP17L23D6RBM5 183 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 SLC25A20O43772 301 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 GAGE7O76087 117 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 IGHV3-33P01772 117 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 GAGE12FP0CL80 117 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 GAGE12GP0CL81 117 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 GAGE12IP0CL82 117 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 GAGE4Q13068 117 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 HES1Q14469 280 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 ATXN8Q156A1 80 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 C15orf32Q32M92 178 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 DEFB121Q5J5C9 76 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 KPRPQ5T749 579 aaPredicted RBP5.7□□□□□ -1.5
CCDC60-204ENST00000539847 IGFL4Q6B9Z1 124 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 Q6YL49 198 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 FAM223AQ8IWN6 122 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 ZFAND2AQ8N6M9 145 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 OR10J6PQ8NGY7 276 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 PLEKHB2Q96CS7 222 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 AMELXQ99217 191 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 PHLDA3Q9Y5J5 127 aa5.7□□□□□ -1.5
CCDC60-204ENST00000539847 TRAV26-2A0A0B4J265 109 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 TRBV27A0A0K0K1C4 114 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 TRBV10-2A0A0K0K1G8 114 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 H3BVH4 76 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 J3QQQ9 107 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 S100A4P26447 101 aaKnown RBP5.69□□□□□ -1.5
CCDC60-204ENST00000539847 LINC00315P59091 139 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 DEFB112Q30KQ8 113 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 ANKRD29Q8N6D5 301 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 TMEM263Q8WUH6 116 aaKnown RBP5.69□□□□□ -1.5
CCDC60-204ENST00000539847 KIR2DL4Q99706 377 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 C16orf95Q9H693 158 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 SPANXCQ9NY87 97 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 CMYA5Q8N3K9 4069 aa5.69□□□□□ -1.5
CCDC60-204ENST00000539847 H3BT86 120 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 H3BUA1 57 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 LGALS9O00182 355 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 PRYO14603 147 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 SNCGO76070 127 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 TSHBP01222 138 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 NHLRC4P0CG21 123 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-204ENST00000539847 IFITM1P13164 125 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 UBE2E1P51965 193 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 NDUFV3P56181 108 aaKnown RBP5.68□□□□□ -1.5
CCDC60-204ENST00000539847 PROK1P58294 105 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 BEAN1Q3B7T3 259 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 TTC32Q5I0X7 151 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 HIST2H2BDQ6DRA6 164 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 Q6ZSN1 163 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 RNF182Q8N6D2 247 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 LINC01006Q8NI28 216 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 MDFICQ9P1T7 246 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 S4R3C0 116 aa5.68□□□□□ -1.5
CCDC60-204ENST00000539847 TMEM223A0PJW6 202 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 M0R2P5 195 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 NDUFA4O00483 81 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 SOCS3O14543 225 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 LGALS3P17931 250 aaKnown RBP5.67□□□□□ -1.5
CCDC60-204ENST00000539847 CFHR3Q02985 330 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 NSUN5P1Q3KNT7 163 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 LINC01620Q4KN68 170 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 C14orf178Q8N769 122 aaPredicted RBP5.67□□□□□ -1.5
CCDC60-204ENST00000539847 KLHL30-AS1Q8NEE0 82 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 PTH2Q96A98 100 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 ODF3Q96PU9 254 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 IMUPQ9GZP8 106 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 EDA2RQ9HAV5 297 aa5.67□□□□□ -1.5
CCDC60-204ENST00000539847 A0A0J9YXY3 114 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 DUSP14O95147 198 aaKnown RBP5.66□□□□□ -1.5
CCDC60-204ENST00000539847 IGHV3-23P01764 117 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 ACYP1P07311 99 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 RNASE3P12724 160 aaKnown RBP5.66□□□□□ -1.5
CCDC60-204ENST00000539847 RNASE4P34096 147 aaKnown RBP5.66□□□□□ -1.5
CCDC60-204ENST00000539847 DLX1P56177 255 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 ANXA2RQ3ZCQ2 193 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 CLEC19AQ6UXS0 136 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms