RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KRTAP13-4Q3LI77 160 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ZCCHC23Q6ZST2 131 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 OR8I2Q8N0Y5 310 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF431Q8TF32 576 aaPredicted RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TSLPQ969D9 159 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 AMELYQ99218 206 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TSC22D3Q99576 134 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 KRTAP2-1Q9BYU5 128 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 RERGLQ9H628 205 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 SSR3Q9UNL2 185 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 PKD1L1Q8TDX9 2849 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 CSMD2Q7Z408 3487 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 NBEAL2Q6ZNJ1 2754 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 DUOX1Q9NRD9 1551 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ABCA1O95477 2261 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 hCG_1818297A0A087WSY0 165 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 ODAMA1E959 279 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 A8MT66 165 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 NDUFC2O95298 119 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 HIST1H1DP16402 221 aaKnown RBP0.4□□□□□ -2.34
HIF1A-204ENST00000539097 S100GP29377 79 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 RPL28P46779 137 aaKnown RBP0.4□□□□□ -2.34
HIF1A-204ENST00000539097 HSD17B12Q53GQ0 312 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 Q6ZUT4 128 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 MIR17HGQ75NE6 70 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 FAM24BQ8N5W8 94 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 TP53RKQ96S44 253 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 PFDN5Q99471 154 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 SPANXDQ9BXN6 97 aa0.4□□□□□ -2.34
HIF1A-204ENST00000539097 FREM3P0C091 2139 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 ANKHD1Q8IWZ3 2542 aaKnown RBP0.4□□□□□ -2.35
HIF1A-204ENST00000539097 TRBV20-1A0A075B6N2 111 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 TRBV7-7A0A0K0K1E9 115 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 FAM25AB3EWG3 89 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 FAM25CB3EWG5 89 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 FAM25GB3EWG6 89 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 MT-ATP8P03928 68 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 SAA1P0DJI8 122 aaPredicted RBP0.4□□□□□ -2.35
HIF1A-204ENST00000539097 CATR1Q13166 79 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 VMA21Q3ZAQ7 101 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 AADACL3Q5VUY0 350 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 SSX8Q7RTT4 187 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 GKN2Q86XP6 184 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 OR5D14Q8NGL3 314 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 GRPEL2Q8TAA5 225 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 PCTPQ9UKL6 214 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 TRAPPC2LQ9UL33 140 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 ASCC3Q8N3C0 2202 aaKnown RBP0.4□□□□□ -2.35
HIF1A-204ENST00000539097 USH2AO75445 5202 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 CHD3Q12873 2000 aaKnown RBP0.4□□□□□ -2.35
HIF1A-204ENST00000539097 A0A087X0T9 212 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 TRAV14DV4A0A0A6YYC5 116 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 DPRXA6NFQ7 191 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 A8MWV9 139 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 PIRO00625 290 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 DPM2O94777 84 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 ANGP03950 147 aaKnown RBP0.4□□□□□ -2.35
HIF1A-204ENST00000539097 NMBP08949 121 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 PPP3R1P63098 170 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 HSD52Q0P140 79 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 IZUMO2Q6UXV1 221 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 C15orf53Q8NAA6 179 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 OR5H6Q8NGV6 325 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 ZNF625Q96I27 306 aaPredicted RBP0.4□□□□□ -2.35
HIF1A-204ENST00000539097 DNAH17Q9UFH2 4485 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 FRYLO94915 3013 aa0.4□□□□□ -2.35
HIF1A-204ENST00000539097 ACACBO00763 2458 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 TRAV12-2A0A075B6T6 113 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 TRGV4A0A0C4DH28 118 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 A0A0J9YX75 114 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 A0A1W2PQD3 144 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 H3BT86 120 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 H7C2G1 150 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 UQCRQO14949 82 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 LYRM1O43325 122 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 NUPR1O60356 82 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 PRB1P04280 392 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 DYNLT3P51808 116 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 KRTAP12-4P60329 112 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 TMEM258P61165 79 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 ZNF846Q147U1 533 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 LYRM7Q5U5X0 104 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 C2orf82Q6UX34 121 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 LINC00575Q6W349 94 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 OR5AS1Q8N127 324 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 TCTEX1D1Q8N7M0 179 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 OR2T10Q8NGZ9 312 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 NABP2Q9BQ15 211 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 MIEN1Q9BRT3 115 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 TCEAL7Q9BRU2 100 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 PSMG3Q9BT73 122 aaPredicted RBP0.39□□□□□ -2.35
HIF1A-204ENST00000539097 FUT9Q9Y231 359 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 TGP01266 2768 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 MED12Q93074 2177 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 UTP20O75691 2785 aaKnown RBP0.39□□□□□ -2.35
HIF1A-204ENST00000539097 ABCA4P78363 2273 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 A0A087WTM6 91 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 IGKV2D-26A0A0A0MRZ7 120 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 RBP4P02753 201 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms