RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
VAMP1-207ENST00000539047 PHLDA1Q8WV24 401 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-207ENST00000539047 URB1-AS1Q96HZ7 61 aa10.83□□□□□ -0.68
VAMP1-207ENST00000539047 LOC100131303A0A0U1RQF7 123 aa10.82□□□□□ -0.68
VAMP1-207ENST00000539047 H3BNG1 76 aa10.82□□□□□ -0.68
VAMP1-207ENST00000539047 PACRGQ96M98 296 aaPredicted RBP10.82□□□□□ -0.68
VAMP1-207ENST00000539047 HSPB8Q9UJY1 196 aa10.82□□□□□ -0.68
VAMP1-207ENST00000539047 IGHV3-38A0A0C4DH36 116 aa10.81□□□□□ -0.68
VAMP1-207ENST00000539047 NUPR1O60356 82 aa10.81□□□□□ -0.68
VAMP1-207ENST00000539047 TSHBP01222 138 aa10.81□□□□□ -0.68
VAMP1-207ENST00000539047 FABP4P15090 132 aa10.81□□□□□ -0.68
VAMP1-207ENST00000539047 SMAGPQ0VAQ4 97 aa10.81□□□□□ -0.68
VAMP1-207ENST00000539047 PMCHL1Q16048 86 aa10.81□□□□□ -0.68
VAMP1-207ENST00000539047 FAM19A2Q8N3H0 131 aa10.81□□□□□ -0.68
VAMP1-207ENST00000539047 ATP6V0E2Q8NHE4 81 aa10.81□□□□□ -0.68
VAMP1-207ENST00000539047 CYSLTR1Q9Y271 337 aa10.81□□□□□ -0.68
VAMP1-207ENST00000539047 LEPROTL1O95214 131 aa10.8□□□□□ -0.68
VAMP1-207ENST00000539047 TRBV25-1A0A075B6N4 114 aa10.79□□□□□ -0.68
VAMP1-207ENST00000539047 LINC00694P0DN24 101 aa10.79□□□□□ -0.68
VAMP1-207ENST00000539047 VSIG2Q96IQ7 327 aa10.79□□□□□ -0.68
VAMP1-207ENST00000539047 HIST1H2BLQ99880 126 aa10.79□□□□□ -0.68
VAMP1-207ENST00000539047 GTSF1LQ9H1H1 148 aa10.79□□□□□ -0.68
VAMP1-207ENST00000539047 Q9UF83 564 aa10.79□□□□□ -0.68
VAMP1-207ENST00000539047 UBE2L6O14933 153 aa10.78□□□□□ -0.68
VAMP1-207ENST00000539047 ATP5LO75964 103 aa10.78□□□□□ -0.68
VAMP1-207ENST00000539047 C2orf66Q6UXQ4 117 aa10.78□□□□□ -0.68
VAMP1-207ENST00000539047 C15orf53Q8NAA6 179 aa10.78□□□□□ -0.68
VAMP1-207ENST00000539047 COL7A1Q02388 2944 aa10.78□□□□□ -0.68
VAMP1-207ENST00000539047 TMEM243Q9BU79 118 aa10.77□□□□□ -0.69
VAMP1-207ENST00000539047 AKR1D1P51857 326 aa10.76□□□□□ -0.69
VAMP1-207ENST00000539047 DEFB104AQ8WTQ1 72 aa10.76□□□□□ -0.69
VAMP1-207ENST00000539047 TOMM6Q96B49 74 aa10.76□□□□□ -0.69
VAMP1-207ENST00000539047 SCGB3A1Q96QR1 104 aa10.76□□□□□ -0.69
VAMP1-207ENST00000539047 MAP1LC3CQ9BXW4 147 aa10.76□□□□□ -0.69
VAMP1-207ENST00000539047 A0A096LPF7 62 aa10.75□□□□□ -0.69
VAMP1-207ENST00000539047 C20orf203Q8NBC4 194 aa10.75□□□□□ -0.69
VAMP1-207ENST00000539047 TRBV6-8A0A0A6YYG3 113 aa10.74□□□□□ -0.69
VAMP1-207ENST00000539047 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
VAMP1-207ENST00000539047 PKIAP61925 76 aa10.74□□□□□ -0.69
VAMP1-207ENST00000539047 PAPPA-AS1Q5QFB9 102 aa10.74□□□□□ -0.69
VAMP1-207ENST00000539047 OR10D4PQ8NGN7 298 aa10.74□□□□□ -0.69
VAMP1-207ENST00000539047 TENM3Q9P273 2699 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 A0A096LNJ9 63 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 NUPR2A6NF83 97 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 IFITM10A6NMD0 228 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 H7C423 109 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 KRTDAPP60985 99 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 Q6ZN92 141 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 ERASQ7Z444 233 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 IFI27L1Q96BM0 104 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 CHCHD7Q9BUK0 85 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 SPANXA1Q9NS26 97 aa10.73□□□□□ -0.69
VAMP1-207ENST00000539047 C20orf202A1L168 122 aa10.72□□□□□ -0.69
VAMP1-207ENST00000539047 DGAT2L7PQ6IED9 249 aa10.72□□□□□ -0.69
VAMP1-207ENST00000539047 TMEM101Q96IK0 257 aa10.72□□□□□ -0.69
VAMP1-207ENST00000539047 TIMM17AQ99595 171 aa10.72□□□□□ -0.69
VAMP1-207ENST00000539047 KLK5Q9Y337 293 aaPredicted RBP10.72□□□□□ -0.69
VAMP1-207ENST00000539047 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.71□□□□□ -0.69
VAMP1-207ENST00000539047 LOC105371267A0A1B0GV96 52 aa10.71□□□□□ -0.69
VAMP1-207ENST00000539047 IGKV2-29A2NJV5 120 aaPredicted RBP10.71□□□□□ -0.69
VAMP1-207ENST00000539047 IGLL5B9A064 214 aa10.71□□□□□ -0.69
VAMP1-207ENST00000539047 TIRAPP58753 221 aa10.71□□□□□ -0.69
VAMP1-207ENST00000539047 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
VAMP1-207ENST00000539047 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
VAMP1-207ENST00000539047 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
VAMP1-207ENST00000539047 PRSS1P07477 247 aa10.7□□□□□ -0.7
VAMP1-207ENST00000539047 NPSP0C0P6 89 aa10.7□□□□□ -0.7
VAMP1-207ENST00000539047 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
VAMP1-207ENST00000539047 LELP1Q5T871 98 aa10.7□□□□□ -0.7
VAMP1-207ENST00000539047 TIMM21Q9BVV7 248 aa10.7□□□□□ -0.7
VAMP1-207ENST00000539047 DNAH9Q9NYC9 4486 aa10.69□□□□□ -0.7
VAMP1-207ENST00000539047 H0Y8G0 127 aa10.69□□□□□ -0.7
VAMP1-207ENST00000539047 OR5A1Q8NGJ0 315 aa10.69□□□□□ -0.7
VAMP1-207ENST00000539047 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
VAMP1-207ENST00000539047 C3orf79P0CE67 100 aa10.68□□□□□ -0.7
VAMP1-207ENST00000539047 FGF6P10767 208 aa10.68□□□□□ -0.7
VAMP1-207ENST00000539047 CEMP1Q6PRD7 247 aaPredicted RBP10.68□□□□□ -0.7
VAMP1-207ENST00000539047 PET117Q6UWS5 81 aa10.68□□□□□ -0.7
VAMP1-207ENST00000539047 MRPL52Q86TS9 123 aaKnown RBP10.68□□□□□ -0.7
VAMP1-207ENST00000539047 UBE2D4Q9Y2X8 147 aa10.68□□□□□ -0.7
VAMP1-207ENST00000539047 SYS1-DBNDD2H3BUS1 97 aa10.67□□□□□ -0.7
VAMP1-207ENST00000539047 GAGE6Q13070 117 aa10.67□□□□□ -0.7
VAMP1-207ENST00000539047 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
VAMP1-207ENST00000539047 LINC00173Q6ZV60 143 aa10.67□□□□□ -0.7
VAMP1-207ENST00000539047 C2orf88Q9BSF0 95 aa10.67□□□□□ -0.7
VAMP1-207ENST00000539047 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
VAMP1-207ENST00000539047 TMEM262E9PQX1 116 aa10.66□□□□□ -0.7
VAMP1-207ENST00000539047 SCGB1D1O95968 90 aa10.66□□□□□ -0.7
VAMP1-207ENST00000539047 CCL18P55774 89 aa10.66□□□□□ -0.7
VAMP1-207ENST00000539047 TCTAP57738 103 aa10.66□□□□□ -0.7
VAMP1-207ENST00000539047 TEX43Q6ZNM6 134 aa10.66□□□□□ -0.7
VAMP1-207ENST00000539047 VCX2Q9H322 139 aa10.66□□□□□ -0.7
VAMP1-207ENST00000539047 CSDC2Q9Y534 153 aaKnown RBP10.66□□□□□ -0.7
VAMP1-207ENST00000539047 A0A087WX48 190 aa10.65□□□□□ -0.7
VAMP1-207ENST00000539047 IGLV4-3A0A075B6K6 122 aa10.64□□□□□ -0.71
VAMP1-207ENST00000539047 MRPS36P82909 103 aaKnown RBP10.64□□□□□ -0.71
VAMP1-207ENST00000539047 PMVKQ15126 192 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms