RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 C4orf48Q5BLP8 95 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 CDKN2A-AS1Q9UH64 79 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 MED12Q93074 2177 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 DOCK10Q96BY6 2186 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 CNFNQ9BYD5 112 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 MAP6D1Q9H9H5 199 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 CCDC140Q96MF4 163 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 IGLV2-11P01706 119 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 CRIP1P50238 77 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 BRWD1-AS2P59051 145 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 REG3AQ06141 175 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.2□□□□□ -1.58
SORT1-209ENST00000538502 Q8N976 141 aa5.2□□□□□ -1.58
SORT1-209ENST00000538502 COL4A6Q14031 1691 aa5.19□□□□□ -1.58
SORT1-209ENST00000538502 IGF1P05019 195 aa5.19□□□□□ -1.58
SORT1-209ENST00000538502 DAZAP2Q15038 168 aaPredicted RBP5.19□□□□□ -1.58
SORT1-209ENST00000538502 PIP4P1Q86T03 277 aa5.19□□□□□ -1.58
SORT1-209ENST00000538502 WFDC11Q8NEX6 87 aa5.19□□□□□ -1.58
SORT1-209ENST00000538502 CLUHP3Q96NS8 147 aa5.19□□□□□ -1.58
SORT1-209ENST00000538502 TRBV6-4A0A1B0GX49 114 aa5.19□□□□□ -1.58
SORT1-209ENST00000538502 ABCA1O95477 2261 aa5.19□□□□□ -1.58
SORT1-209ENST00000538502 ALPK3Q96L96 1907 aa5.19□□□□□ -1.58
SORT1-209ENST00000538502 IGHV4-38-2P0DP08 117 aa5.19□□□□□ -1.58
SORT1-209ENST00000538502 CEMP1Q6PRD7 247 aaPredicted RBP5.18□□□□□ -1.58
SORT1-209ENST00000538502 DOPEY2Q9Y3R5 2298 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 K7EQG2 157 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 CRIP3Q6Q6R5 217 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 CHCHD10Q8WYQ3 142 aaPredicted RBP5.18□□□□□ -1.58
SORT1-209ENST00000538502 TSHBP01222 138 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 UBE2D3P61077 147 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 UBE2D2P62837 147 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 DEFB136Q30KP8 78 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 EBI3Q14213 229 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 KLK12Q9UKR0 248 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 ADAMTS9Q9P2N4 1935 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 SPTA1P02549 2419 aa5.18□□□□□ -1.58
SORT1-209ENST00000538502 FBXL19-AS1Q494R0 122 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 F8W735 103 aaPredicted RBP5.17□□□□□ -1.58
SORT1-209ENST00000538502 M0R378 163 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 UNQ9165/PRO28630Q6UXU0 137 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 ZFAND3Q9H8U3 227 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 MRGPRG-AS1Q2M3A8 158 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 Q6ZPA2 131 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 CADP27708 2225 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 TRBV6-8A0A0A6YYG3 113 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 SLPIP03973 132 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 UBE2D1P51668 147 aa5.17□□□□□ -1.58
SORT1-209ENST00000538502 SPTBN1Q01082 2364 aaKnown RBP5.16□□□□□ -1.58
SORT1-209ENST00000538502 IGHV4-61A0A0C4DH41 118 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 DEFB113Q30KQ7 82 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 SMIM11BQ8TCY0 68 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 NRGNQ92686 78 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 UBE2D4Q9Y2X8 147 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 POLR2KP53803 58 aaKnown RBP5.16□□□□□ -1.58
SORT1-209ENST00000538502 CSDC2Q9Y534 153 aaKnown RBP5.16□□□□□ -1.58
SORT1-209ENST00000538502 SMAD5-AS1Q9Y6J3 95 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 NUP210LQ5VU65 1888 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 LOC107984640A0A0U1RRK4 108 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 TNFRSF13BO14836 293 aaPredicted RBP5.16□□□□□ -1.58
SORT1-209ENST00000538502 HRCT1Q6UXD1 115 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 ZNF706Q9Y5V0 76 aaPredicted RBP5.16□□□□□ -1.58
SORT1-209ENST00000538502 C6orf99Q4VX62 202 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 LINC00269Q8N2A0 174 aa5.16□□□□□ -1.58
SORT1-209ENST00000538502 LY6LH3BQJ8 138 aa5.15□□□□□ -1.58
SORT1-209ENST00000538502 RPL28P46779 137 aaKnown RBP5.15□□□□□ -1.58
SORT1-209ENST00000538502 FAM19A5Q7Z5A7 132 aaPredicted RBP5.15□□□□□ -1.58
SORT1-209ENST00000538502 ZDBF2Q9HCK1 2354 aa5.15□□□□□ -1.58
SORT1-209ENST00000538502 PRYO14603 147 aa5.15□□□□□ -1.58
SORT1-209ENST00000538502 BCE1O60756 84 aa5.15□□□□□ -1.58
SORT1-209ENST00000538502 SCXQ7RTU7 201 aa5.15□□□□□ -1.58
SORT1-209ENST00000538502 C9orf85Q96MD7 179 aa5.15□□□□□ -1.58
SORT1-209ENST00000538502 Q8N9L7 120 aa5.15□□□□□ -1.59
SORT1-209ENST00000538502 TRBV7-7A0A0K0K1E9 115 aa5.15□□□□□ -1.59
SORT1-209ENST00000538502 CD164L2Q6UWJ8 174 aa5.15□□□□□ -1.59
SORT1-209ENST00000538502 MAPK1IP1LQ8NDC0 245 aa5.15□□□□□ -1.59
SORT1-209ENST00000538502 Q8IZM0 81 aa5.14□□□□□ -1.59
SORT1-209ENST00000538502 ZFP36P26651 326 aaKnown RBP5.14□□□□□ -1.59
SORT1-209ENST00000538502 LINC00310P59036 64 aa5.14□□□□□ -1.59
SORT1-209ENST00000538502 WFDC10BQ8IUB3 73 aa5.14□□□□□ -1.59
SORT1-209ENST00000538502 PRORYQ9H606 182 aa5.14□□□□□ -1.59
SORT1-209ENST00000538502 KLK5Q9Y337 293 aaPredicted RBP5.14□□□□□ -1.59
SORT1-209ENST00000538502 IGHV4-30-2A0A087WSY4 118 aa5.14□□□□□ -1.59
SORT1-209ENST00000538502 TRBV10-3A0A0K0K1G6 114 aa5.14□□□□□ -1.59
SORT1-209ENST00000538502 IGIPA6NJ69 53 aa5.14□□□□□ -1.59
SORT1-209ENST00000538502 RPS28P62857 69 aaKnown RBP5.13□□□□□ -1.59
SORT1-209ENST00000538502 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 KLLNB2CW77 178 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 PMAIP1Q13794 54 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 WFDC10AQ9H1F0 79 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 COX8CQ7Z4L0 72 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 Q6ZTI0 123 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 FAM19A1Q7Z5A9 133 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 RNASE3P12724 160 aaKnown RBP5.13□□□□□ -1.59
SORT1-209ENST00000538502 Q6ZS46 218 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 IL17DQ8TAD2 202 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 WNK2Q9Y3S1 2297 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 PSMG3-AS1Q96PY0 264 aa5.13□□□□□ -1.59
SORT1-209ENST00000538502 ZNF407Q9C0G0 2248 aa5.12□□□□□ -1.59
SORT1-209ENST00000538502 NTM-AS1Q6ZSK4 140 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms