RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PYGO1Q9Y3Y4 419 aa10.14□□□□□ -0.79
LIMK1-208ENST00000538333 TNFRSF18Q9Y5U5 241 aa10.14□□□□□ -0.79
LIMK1-208ENST00000538333 TMEM238LA0A1B0GVL6 79 aa10.13□□□□□ -0.79
LIMK1-208ENST00000538333 A0A1W2PPM0 123 aa10.13□□□□□ -0.79
LIMK1-208ENST00000538333 OTOGQ6ZRI0 2925 aa10.12□□□□□ -0.79
LIMK1-208ENST00000538333 GAGE10A6NGK3 116 aa10.12□□□□□ -0.79
LIMK1-208ENST00000538333 NDUFA7O95182 113 aa10.12□□□□□ -0.79
LIMK1-208ENST00000538333 TMEM170BQ5T4T1 132 aa10.12□□□□□ -0.79
LIMK1-208ENST00000538333 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
LIMK1-208ENST00000538333 K7EP34 96 aa10.12□□□□□ -0.79
LIMK1-208ENST00000538333 SAP30O75446 220 aa10.12□□□□□ -0.79
LIMK1-208ENST00000538333 IGLV1-51P01701 117 aa10.12□□□□□ -0.79
LIMK1-208ENST00000538333 TSPEAR-AS2P59090 65 aa10.12□□□□□ -0.79
LIMK1-208ENST00000538333 RNASE8Q8TDE3 154 aaKnown RBP10.12□□□□□ -0.79
LIMK1-208ENST00000538333 SETD2Q9BYW2 2564 aaPredicted RBP10.11□□□□□ -0.79
LIMK1-208ENST00000538333 SMR3AQ99954 134 aa10.11□□□□□ -0.79
LIMK1-208ENST00000538333 IGHV3OR16-12A0A075B7B8 117 aa10.11□□□□□ -0.79
LIMK1-208ENST00000538333 GIG44P09565 113 aaPredicted RBP10.11□□□□□ -0.79
LIMK1-208ENST00000538333 SAMD5Q5TGI4 173 aa10.11□□□□□ -0.79
LIMK1-208ENST00000538333 GTF2H5Q6ZYL4 71 aa10.11□□□□□ -0.79
LIMK1-208ENST00000538333 DNAJC30Q96LL9 226 aa10.11□□□□□ -0.79
LIMK1-208ENST00000538333 AMELXQ99217 191 aa10.11□□□□□ -0.79
LIMK1-208ENST00000538333 FAM110AQ9BQ89 295 aa10.11□□□□□ -0.79
LIMK1-208ENST00000538333 CHCHD7Q9BUK0 85 aa10.11□□□□□ -0.79
LIMK1-208ENST00000538333 C19orf73Q9NVV2 129 aa10.11□□□□□ -0.79
LIMK1-208ENST00000538333 A0A1B0GWB2 263 aa10.1□□□□□ -0.79
LIMK1-208ENST00000538333 C12orf74Q32Q52 190 aa10.1□□□□□ -0.79
LIMK1-208ENST00000538333 VCX2Q9H322 139 aa10.1□□□□□ -0.79
LIMK1-208ENST00000538333 CRYBA4P53673 196 aa10.09□□□□□ -0.79
LIMK1-208ENST00000538333 CMC4P56277 68 aaPredicted RBP10.09□□□□□ -0.79
LIMK1-208ENST00000538333 TMEM223A0PJW6 202 aa10.09□□□□□ -0.79
LIMK1-208ENST00000538333 GAGE12BA1L429 117 aa10.09□□□□□ -0.79
LIMK1-208ENST00000538333 CYSRT1A8MQ03 144 aa10.09□□□□□ -0.79
LIMK1-208ENST00000538333 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
LIMK1-208ENST00000538333 SCGB1D4Q6XE38 83 aa10.09□□□□□ -0.79
LIMK1-208ENST00000538333 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
LIMK1-208ENST00000538333 A0A0J9YY99 117 aa10.08□□□□□ -0.8
LIMK1-208ENST00000538333 FABP2P12104 132 aa10.08□□□□□ -0.8
LIMK1-208ENST00000538333 C21orf62-AS1Q17RA5 79 aa10.08□□□□□ -0.8
LIMK1-208ENST00000538333 TMEM263Q8WUH6 116 aaKnown RBP10.08□□□□□ -0.8
LIMK1-208ENST00000538333 WFDC10AQ9H1F0 79 aa10.08□□□□□ -0.8
LIMK1-208ENST00000538333 J3QQQ9 107 aa10.08□□□□□ -0.8
LIMK1-208ENST00000538333 CEMP1Q6PRD7 247 aaPredicted RBP10.08□□□□□ -0.8
LIMK1-208ENST00000538333 OR5A1Q8NGJ0 315 aa10.08□□□□□ -0.8
LIMK1-208ENST00000538333 UBE2D4Q9Y2X8 147 aa10.08□□□□□ -0.8
LIMK1-208ENST00000538333 SPCS1Q9Y6A9 102 aa10.08□□□□□ -0.8
LIMK1-208ENST00000538333 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
LIMK1-208ENST00000538333 IGLL5B9A064 214 aa10.07□□□□□ -0.8
LIMK1-208ENST00000538333 MRPS36P82909 103 aaKnown RBP10.07□□□□□ -0.8
LIMK1-208ENST00000538333 SPANXA1Q9NS26 97 aa10.07□□□□□ -0.8
LIMK1-208ENST00000538333 NIPBLQ6KC79 2804 aaeCLIP10.06□□□□□ -0.8
LIMK1-208ENST00000538333 HIVEP2P31629 2446 aa10.06□□□□□ -0.8
LIMK1-208ENST00000538333 IGHV3-38A0A0C4DH36 116 aa10.06□□□□□ -0.8
LIMK1-208ENST00000538333 LEPROTO15243 131 aa10.06□□□□□ -0.8
LIMK1-208ENST00000538333 KRTAP10-3P60369 221 aa10.06□□□□□ -0.8
LIMK1-208ENST00000538333 Q6ZTI0 123 aa10.06□□□□□ -0.8
LIMK1-208ENST00000538333 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
LIMK1-208ENST00000538333 SPANXB1Q9NS25 103 aaPredicted RBP10.05□□□□□ -0.8
LIMK1-208ENST00000538333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.05□□□□□ -0.8
LIMK1-208ENST00000538333 PLAC8L1A1L4L8 177 aa10.05□□□□□ -0.8
LIMK1-208ENST00000538333 IGKV2-29A2NJV5 120 aaPredicted RBP10.05□□□□□ -0.8
LIMK1-208ENST00000538333 COTL1Q14019 142 aa10.05□□□□□ -0.8
LIMK1-208ENST00000538333 SLC25A29Q8N8R3 303 aa10.05□□□□□ -0.8
LIMK1-208ENST00000538333 JMJD1CQ15652 2540 aa10.05□□□□□ -0.8
LIMK1-208ENST00000538333 LY6G6DO95868 133 aa10.04□□□□□ -0.8
LIMK1-208ENST00000538333 LGALS3P17931 250 aaKnown RBP10.04□□□□□ -0.8
LIMK1-208ENST00000538333 UBE2D1P51668 147 aa10.04□□□□□ -0.8
LIMK1-208ENST00000538333 DAZ2Q13117 558 aaKnown RBP10.04□□□□□ -0.8
LIMK1-208ENST00000538333 SRSF9Q13242 221 aaKnown RBP eCLIP10.04□□□□□ -0.8
LIMK1-208ENST00000538333 CSNK1G2-AS1Q8NCQ2 148 aa10.04□□□□□ -0.8
LIMK1-208ENST00000538333 TRAV4A0A0B4J268 109 aa10.04□□□□□ -0.8
LIMK1-208ENST00000538333 RNASE13Q5GAN3 156 aaKnown RBP10.04□□□□□ -0.8
LIMK1-208ENST00000538333 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
LIMK1-208ENST00000538333 RPL35AP18077 110 aaKnown RBP10.03□□□□□ -0.8
LIMK1-208ENST00000538333 PCP4P48539 62 aa10.03□□□□□ -0.8
LIMK1-208ENST00000538333 RBX1P62877 108 aa10.03□□□□□ -0.8
LIMK1-208ENST00000538333 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
LIMK1-208ENST00000538333 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.8
LIMK1-208ENST00000538333 A6NJY4 79 aa10.02□□□□□ -0.8
LIMK1-208ENST00000538333 RRN3P1Q2M238 152 aa10.02□□□□□ -0.8
LIMK1-208ENST00000538333 Q6ZUT4 128 aa10.02□□□□□ -0.8
LIMK1-208ENST00000538333 IGHV3-64A0A075B6Q5 118 aa10.02□□□□□ -0.81
LIMK1-208ENST00000538333 K7EQD1 137 aa10.02□□□□□ -0.81
LIMK1-208ENST00000538333 IGHV3-30P01768 117 aa10.02□□□□□ -0.81
LIMK1-208ENST00000538333 IGHV3-30-5P0DP03 117 aa10.02□□□□□ -0.81
LIMK1-208ENST00000538333 OCIAD2Q56VL3 154 aa10.02□□□□□ -0.81
LIMK1-208ENST00000538333 C16orf74Q96GX8 76 aa10.02□□□□□ -0.81
LIMK1-208ENST00000538333 NOP10Q9NPE3 64 aaKnown RBP10.02□□□□□ -0.81
LIMK1-208ENST00000538333 TINCRA0A1B0GVN0 87 aa10.01□□□□□ -0.81
LIMK1-208ENST00000538333 NOTCH3Q9UM47 2321 aa10.01□□□□□ -0.81
LIMK1-208ENST00000538333 TIMM21Q9BVV7 248 aa10.01□□□□□ -0.81
LIMK1-208ENST00000538333 C1QTNF4Q9BXJ3 329 aa10.01□□□□□ -0.81
LIMK1-208ENST00000538333 IGHV3-30-3P0DP02 117 aa10□□□□□ -0.81
LIMK1-208ENST00000538333 LINC00482Q8N8I6 264 aa10□□□□□ -0.81
LIMK1-208ENST00000538333 RPL36AP83881 106 aaKnown RBP9.99□□□□□ -0.81
LIMK1-208ENST00000538333 C10orf126Q8N4M7 172 aa9.99□□□□□ -0.81
LIMK1-208ENST00000538333 RPL36ALQ969Q0 106 aaKnown RBP9.99□□□□□ -0.81
LIMK1-208ENST00000538333 MAST4O15021 2626 aa9.99□□□□□ -0.81
LIMK1-208ENST00000538333 HIVEP1P15822 2718 aa9.99□□□□□ -0.81
LIMK1-208ENST00000538333 UBE2D3P61077 147 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms