RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 RNASE8Q8TDE3 154 aaKnown RBP8.25□□□□□ -1.09
SLC28A1-204ENST00000538177 FAM104AQ969W3 186 aa8.25□□□□□ -1.09
SLC28A1-204ENST00000538177 NAA38Q9BRA0 125 aaKnown RBP8.25□□□□□ -1.09
SLC28A1-204ENST00000538177 VCX2Q9H322 139 aa8.25□□□□□ -1.09
SLC28A1-204ENST00000538177 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
SLC28A1-204ENST00000538177 AMELXQ99217 191 aa8.24□□□□□ -1.09
SLC28A1-204ENST00000538177 C19orf73Q9NVV2 129 aa8.24□□□□□ -1.09
SLC28A1-204ENST00000538177 IGHV3OR16-12A0A075B7B8 117 aa8.24□□□□□ -1.09
SLC28A1-204ENST00000538177 K7EP34 96 aa8.24□□□□□ -1.09
SLC28A1-204ENST00000538177 K7ERJ3 54 aa8.24□□□□□ -1.09
SLC28A1-204ENST00000538177 GIG44P09565 113 aaPredicted RBP8.24□□□□□ -1.09
SLC28A1-204ENST00000538177 SAMD5Q5TGI4 173 aa8.24□□□□□ -1.09
SLC28A1-204ENST00000538177 PLEKHB2Q96CS7 222 aa8.24□□□□□ -1.09
SLC28A1-204ENST00000538177 CHCHD7Q9BUK0 85 aa8.24□□□□□ -1.09
SLC28A1-204ENST00000538177 A0A1B0GWB2 263 aa8.23□□□□□ -1.09
SLC28A1-204ENST00000538177 C12orf74Q32Q52 190 aa8.23□□□□□ -1.09
SLC28A1-204ENST00000538177 SMR3AQ99954 134 aa8.23□□□□□ -1.09
SLC28A1-204ENST00000538177 HIVEP2P31629 2446 aa8.23□□□□□ -1.09
SLC28A1-204ENST00000538177 TMEM223A0PJW6 202 aa8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 ZNF22P17026 224 aaPredicted RBP8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 SCGB1D4Q6XE38 83 aa8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 TMEM263Q8WUH6 116 aaKnown RBP8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 CUBNO60494 3623 aa8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 FASNP49327 2511 aaKnown RBP8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 A0A0J9YXV3 536 aa8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 FABP2P12104 132 aa8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 SPANXA1Q9NS26 97 aa8.22□□□□□ -1.09
SLC28A1-204ENST00000538177 TRGV1A0A0A0MS02 117 aa8.21□□□□□ -1.09
SLC28A1-204ENST00000538177 A0A0J9YY99 117 aa8.21□□□□□ -1.09
SLC28A1-204ENST00000538177 GAGE12BA1L429 117 aa8.21□□□□□ -1.09
SLC28A1-204ENST00000538177 J3QQQ9 107 aa8.21□□□□□ -1.09
SLC28A1-204ENST00000538177 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.09
SLC28A1-204ENST00000538177 IGLL5B9A064 214 aa8.21□□□□□ -1.1
SLC28A1-204ENST00000538177 LEPROTO15243 131 aa8.21□□□□□ -1.1
SLC28A1-204ENST00000538177 LY6G6DO95868 133 aa8.21□□□□□ -1.1
SLC28A1-204ENST00000538177 MRPS36P82909 103 aaKnown RBP8.21□□□□□ -1.1
SLC28A1-204ENST00000538177 COTL1Q14019 142 aa8.21□□□□□ -1.1
SLC28A1-204ENST00000538177 UBE2D4Q9Y2X8 147 aa8.21□□□□□ -1.1
SLC28A1-204ENST00000538177 SPCS1Q9Y6A9 102 aa8.21□□□□□ -1.1
SLC28A1-204ENST00000538177 KRTAP10-3P60369 221 aa8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 DAZ2Q13117 558 aaKnown RBP8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 NDUFA11Q86Y39 141 aa8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 TRAV4A0A0B4J268 109 aa8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 LGALS3P17931 250 aaKnown RBP8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 SRSF9Q13242 221 aaKnown RBP eCLIP8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 CEMP1Q6PRD7 247 aaPredicted RBP8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 Q6ZTI0 123 aa8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 ZNF479Q96JC4 524 aa8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 WFDC10AQ9H1F0 79 aa8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 SPANXB1Q9NS25 103 aaPredicted RBP8.2□□□□□ -1.1
SLC28A1-204ENST00000538177 IGHV3-38A0A0C4DH36 116 aa8.19□□□□□ -1.1
SLC28A1-204ENST00000538177 TRBV10-1A0A0K0K1A3 114 aa8.19□□□□□ -1.1
SLC28A1-204ENST00000538177 SLC25A29Q8N8R3 303 aa8.19□□□□□ -1.1
SLC28A1-204ENST00000538177 CSNK1G2-AS1Q8NCQ2 148 aa8.19□□□□□ -1.1
SLC28A1-204ENST00000538177 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 PLAC8L1A1L4L8 177 aa8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 IGKV2-29A2NJV5 120 aaPredicted RBP8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 C1QTNF4Q9BXJ3 329 aa8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 A6NJY4 79 aa8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 RPL35AP18077 110 aaKnown RBP8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 UBE2D1P51668 147 aa8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 RRN3P1Q2M238 152 aa8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 C16orf74Q96GX8 76 aa8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 TIMM21Q9BVV7 248 aa8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 NOP10Q9NPE3 64 aaKnown RBP8.18□□□□□ -1.1
SLC28A1-204ENST00000538177 JMJD1CQ15652 2540 aa8.17□□□□□ -1.1
SLC28A1-204ENST00000538177 TINCRA0A1B0GVN0 87 aa8.17□□□□□ -1.1
SLC28A1-204ENST00000538177 K7EQD1 137 aa8.17□□□□□ -1.1
SLC28A1-204ENST00000538177 NOTCH3Q9UM47 2321 aa8.17□□□□□ -1.1
SLC28A1-204ENST00000538177 RPL36AP83881 106 aaKnown RBP8.17□□□□□ -1.1
SLC28A1-204ENST00000538177 RPL36ALQ969Q0 106 aaKnown RBP8.17□□□□□ -1.1
SLC28A1-204ENST00000538177 OVOL2Q9BRP0 275 aa8.17□□□□□ -1.1
SLC28A1-204ENST00000538177 IGHV3-30P01768 117 aa8.16□□□□□ -1.1
SLC28A1-204ENST00000538177 IGHV3-30-5P0DP03 117 aa8.16□□□□□ -1.1
SLC28A1-204ENST00000538177 FOSL1P15407 271 aa8.16□□□□□ -1.1
SLC28A1-204ENST00000538177 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
SLC28A1-204ENST00000538177 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
SLC28A1-204ENST00000538177 Q6ZUT4 128 aa8.16□□□□□ -1.1
SLC28A1-204ENST00000538177 LINC00482Q8N8I6 264 aa8.16□□□□□ -1.1
SLC28A1-204ENST00000538177 SETXQ7Z333 2677 aaKnown RBP8.16□□□□□ -1.1
SLC28A1-204ENST00000538177 GCN1Q92616 2671 aaKnown RBP8.16□□□□□ -1.1
SLC28A1-204ENST00000538177 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
SLC28A1-204ENST00000538177 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
SLC28A1-204ENST00000538177 CIDEAO60543 219 aa8.15□□□□□ -1.11
SLC28A1-204ENST00000538177 PF4P02776 101 aa8.15□□□□□ -1.11
SLC28A1-204ENST00000538177 IGHV3-30-3P0DP02 117 aa8.15□□□□□ -1.11
SLC28A1-204ENST00000538177 UBE2D3P61077 147 aa8.15□□□□□ -1.11
SLC28A1-204ENST00000538177 UBE2D2P62837 147 aa8.15□□□□□ -1.11
SLC28A1-204ENST00000538177 RBX1P62877 108 aa8.15□□□□□ -1.11
SLC28A1-204ENST00000538177 IGHV3-64A0A075B6Q5 118 aa8.14□□□□□ -1.11
SLC28A1-204ENST00000538177 HECTD1Q9ULT8 2610 aa8.14□□□□□ -1.11
SLC28A1-204ENST00000538177 NOTCH2Q04721 2471 aa8.14□□□□□ -1.11
SLC28A1-204ENST00000538177 IGHV1-58A0A0C4DH39 117 aa8.14□□□□□ -1.11
SLC28A1-204ENST00000538177 NTM-AS1Q6ZSK4 140 aa8.14□□□□□ -1.11
SLC28A1-204ENST00000538177 C10orf126Q8N4M7 172 aa8.14□□□□□ -1.11
SLC28A1-204ENST00000538177 TIRAPP58753 221 aa8.13□□□□□ -1.11
SLC28A1-204ENST00000538177 CSDC2Q9Y534 153 aaKnown RBP8.13□□□□□ -1.11
SLC28A1-204ENST00000538177 NIPBLQ6KC79 2804 aaeCLIP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms