RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 PKD1L2Q7Z442 2459 aa7.93□□□□□ -1.14
RTN3-208ENST00000537981 IGLV3-9A0A075B6K5 115 aa7.93□□□□□ -1.14
RTN3-208ENST00000537981 RPL35AP18077 110 aaKnown RBP7.93□□□□□ -1.14
RTN3-208ENST00000537981 C9orf129Q5T035 196 aaKnown RBP7.93□□□□□ -1.14
RTN3-208ENST00000537981 GYPEP15421 78 aa7.92□□□□□ -1.14
RTN3-208ENST00000537981 FHL2Q14192 279 aa7.92□□□□□ -1.14
RTN3-208ENST00000537981 TMEM30BQ3MIR4 351 aa7.92□□□□□ -1.14
RTN3-208ENST00000537981 IGHV3-30-3P0DP02 117 aa7.92□□□□□ -1.14
RTN3-208ENST00000537981 Q8N2B8 174 aa7.92□□□□□ -1.14
RTN3-208ENST00000537981 CRYBG3Q68DQ2 2970 aa7.91□□□□□ -1.14
RTN3-208ENST00000537981 IGLV11-55A0A075B6I3 123 aa7.91□□□□□ -1.14
RTN3-208ENST00000537981 IGHV3OR16-10A0A075B7F0 116 aa7.91□□□□□ -1.14
RTN3-208ENST00000537981 LINC00315P59091 139 aa7.91□□□□□ -1.14
RTN3-208ENST00000537981 PAPPA-AS1Q5QFB9 102 aa7.91□□□□□ -1.14
RTN3-208ENST00000537981 PHLDA3Q9Y5J5 127 aa7.91□□□□□ -1.14
RTN3-208ENST00000537981 ITPR1Q14643 2758 aa7.91□□□□□ -1.14
RTN3-208ENST00000537981 S100A4P26447 101 aaKnown RBP7.91□□□□□ -1.14
RTN3-208ENST00000537981 TMEM61Q8N0U2 210 aa7.91□□□□□ -1.14
RTN3-208ENST00000537981 IGLV1-47P01700 117 aa7.9□□□□□ -1.14
RTN3-208ENST00000537981 COX6CP09669 75 aa7.9□□□□□ -1.14
RTN3-208ENST00000537981 POLR2KP53803 58 aaKnown RBP7.9□□□□□ -1.14
RTN3-208ENST00000537981 TMEM258P61165 79 aa7.9□□□□□ -1.14
RTN3-208ENST00000537981 CIRBPQ14011 172 aaKnown RBP7.9□□□□□ -1.14
RTN3-208ENST00000537981 FAM223AQ8IWN6 122 aa7.9□□□□□ -1.14
RTN3-208ENST00000537981 C20orf173Q96LM9 149 aa7.9□□□□□ -1.14
RTN3-208ENST00000537981 BUB1B-PAK6H3BSN5 160 aa7.9□□□□□ -1.15
RTN3-208ENST00000537981 AVPP01185 164 aa7.9□□□□□ -1.15
RTN3-208ENST00000537981 FAM27E3Q08E93 113 aa7.9□□□□□ -1.15
RTN3-208ENST00000537981 SUMO4Q6EEV6 95 aa7.9□□□□□ -1.15
RTN3-208ENST00000537981 VMO1Q7Z5L0 202 aa7.9□□□□□ -1.15
RTN3-208ENST00000537981 SDHAF1A6NFY7 115 aa7.89□□□□□ -1.15
RTN3-208ENST00000537981 BUB3O43684 328 aa7.89□□□□□ -1.15
RTN3-208ENST00000537981 RNASE3P12724 160 aaKnown RBP7.89□□□□□ -1.15
RTN3-208ENST00000537981 FAM218AQ96MZ4 157 aa7.89□□□□□ -1.15
RTN3-208ENST00000537981 SPTA1P02549 2419 aa7.89□□□□□ -1.15
RTN3-208ENST00000537981 ATOX1O00244 68 aa7.89□□□□□ -1.15
RTN3-208ENST00000537981 NDUFB3O43676 98 aa7.89□□□□□ -1.15
RTN3-208ENST00000537981 RPL18AQ02543 176 aaKnown RBP7.89□□□□□ -1.15
RTN3-208ENST00000537981 LINC01561Q8N1V8 128 aa7.89□□□□□ -1.15
RTN3-208ENST00000537981 ATRXP46100 2492 aa7.88□□□□□ -1.15
RTN3-208ENST00000537981 MAP1AP78559 2803 aaPredicted RBP7.88□□□□□ -1.15
RTN3-208ENST00000537981 IGHV1-69DA0A0B4J2H0 117 aa7.88□□□□□ -1.15
RTN3-208ENST00000537981 F6UB75 175 aa7.88□□□□□ -1.15
RTN3-208ENST00000537981 TMEM190Q8WZ59 177 aa7.88□□□□□ -1.15
RTN3-208ENST00000537981 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
RTN3-208ENST00000537981 Q9HAA7 133 aa7.88□□□□□ -1.15
RTN3-208ENST00000537981 ACYP1P07311 99 aa7.88□□□□□ -1.15
RTN3-208ENST00000537981 PFN2P35080 140 aa7.88□□□□□ -1.15
RTN3-208ENST00000537981 KIF25-AS1Q9Y6Z4 181 aa7.88□□□□□ -1.15
RTN3-208ENST00000537981 FAM223BA6NKX1 122 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 ATP5G1P05496 136 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 HOXD3P31249 432 aaPredicted RBP7.87□□□□□ -1.15
RTN3-208ENST00000537981 CXCL5P42830 114 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 FAM74A4Q5TZK3 123 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 ZFAND2AQ8N6M9 145 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 TMEM141Q96I45 108 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 F5H697 171 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 HILS1P60008 231 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 BEAN1Q3B7T3 259 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 PRORYQ9H606 182 aa7.87□□□□□ -1.15
RTN3-208ENST00000537981 TMEM178BH3BS89 294 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 MIAQ16674 131 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 TMEM86BQ8N661 226 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 FAM104AQ969W3 186 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 NDUFA12Q9UI09 145 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 SORL1Q92673 2214 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 HRNRQ86YZ3 2850 aaPredicted RBP7.86□□□□□ -1.15
RTN3-208ENST00000537981 LYNX1G3V0Z9 82 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 LY6LH3BQJ8 138 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 K7ENP7 123 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 BAALC-AS2P0C853 105 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 LYNX1P0DP58 116 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 RNASE4P34096 147 aaKnown RBP7.86□□□□□ -1.15
RTN3-208ENST00000537981 SERP2Q8N6R1 65 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 WFDC9Q8NEX5 89 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 WFDC11Q8NEX6 87 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 CHD6Q8TD26 2715 aa7.86□□□□□ -1.15
RTN3-208ENST00000537981 MDFIQ99750 246 aa7.85□□□□□ -1.15
RTN3-208ENST00000537981 AKAP6Q13023 2319 aa7.85□□□□□ -1.15
RTN3-208ENST00000537981 IGLV4-3A0A075B6K6 122 aa7.85□□□□□ -1.15
RTN3-208ENST00000537981 A0A0J9YX75 114 aa7.85□□□□□ -1.15
RTN3-208ENST00000537981 C9orf139Q6ZV77 190 aa7.85□□□□□ -1.15
RTN3-208ENST00000537981 ZNF625Q96I27 306 aaPredicted RBP7.85□□□□□ -1.15
RTN3-208ENST00000537981 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.84□□□□□ -1.15
RTN3-208ENST00000537981 U3KQE9 123 aa7.84□□□□□ -1.15
RTN3-208ENST00000537981 SYNJ2BPP57105 145 aa7.84□□□□□ -1.15
RTN3-208ENST00000537981 CDSNQ15517 529 aa7.84□□□□□ -1.15
RTN3-208ENST00000537981 FAM19A1Q7Z5A9 133 aa7.84□□□□□ -1.15
RTN3-208ENST00000537981 LINC01356Q8N9X3 169 aa7.83□□□□□ -1.16
RTN3-208ENST00000537981 SPANXDQ9BXN6 97 aa7.83□□□□□ -1.16
RTN3-208ENST00000537981 C14orf132Q9NPU4 83 aa7.83□□□□□ -1.16
RTN3-208ENST00000537981 LINC00846Q9NV44 126 aa7.83□□□□□ -1.16
RTN3-208ENST00000537981 IGKV3-7A0A075B6H7 116 aa7.83□□□□□ -1.16
RTN3-208ENST00000537981 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
RTN3-208ENST00000537981 FAM236DA0A1B0GTK5 79 aa7.83□□□□□ -1.16
RTN3-208ENST00000537981 FAM236CP0DP71 79 aa7.83□□□□□ -1.16
RTN3-208ENST00000537981 C1orf195Q5TG92 126 aa7.83□□□□□ -1.16
RTN3-208ENST00000537981 C15orf32Q32M92 178 aa7.82□□□□□ -1.16
RTN3-208ENST00000537981 Q9H8V8 135 aa7.82□□□□□ -1.16
RTN3-208ENST00000537981 IGHV4OR15-8A0A075B7B6 117 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms