RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 TNFRSF18Q9Y5U5 241 aa12.59□□□□□ -0.39
SNX17-210ENST00000537606 TEP1Q99973 2627 aaKnown RBP12.59□□□□□ -0.39
SNX17-210ENST00000537606 PMVKQ15126 192 aa12.59□□□□□ -0.39
SNX17-210ENST00000537606 K7ERJ3 54 aa12.58□□□□□ -0.4
SNX17-210ENST00000537606 IGHV3-53P01767 116 aa12.58□□□□□ -0.4
SNX17-210ENST00000537606 Q6ZTI0 123 aa12.58□□□□□ -0.4
SNX17-210ENST00000537606 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.58□□□□□ -0.4
SNX17-210ENST00000537606 H3BUT2 72 aa12.58□□□□□ -0.4
SNX17-210ENST00000537606 OR4C5Q8NGB2 326 aa12.58□□□□□ -0.4
SNX17-210ENST00000537606 TIMM17AQ99595 171 aa12.58□□□□□ -0.4
SNX17-210ENST00000537606 IGHV3-38A0A0C4DH36 116 aa12.57□□□□□ -0.4
SNX17-210ENST00000537606 H3BRM9 83 aa12.57□□□□□ -0.4
SNX17-210ENST00000537606 PIK3CD-AS1Q5SR53 167 aa12.57□□□□□ -0.4
SNX17-210ENST00000537606 PTH2Q96A98 100 aa12.57□□□□□ -0.4
SNX17-210ENST00000537606 TMEM141Q96I45 108 aa12.57□□□□□ -0.4
SNX17-210ENST00000537606 NOP10Q9NPE3 64 aaKnown RBP12.57□□□□□ -0.4
SNX17-210ENST00000537606 NBEAL2Q6ZNJ1 2754 aa12.57□□□□□ -0.4
SNX17-210ENST00000537606 RS1O15537 224 aa12.57□□□□□ -0.4
SNX17-210ENST00000537606 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
SNX17-210ENST00000537606 ZNF479Q96JC4 524 aa12.57□□□□□ -0.4
SNX17-210ENST00000537606 MYMXA0A1B0GTQ4 84 aa12.56□□□□□ -0.4
SNX17-210ENST00000537606 E9PLD3 99 aa12.56□□□□□ -0.4
SNX17-210ENST00000537606 C20orf203Q8NBC4 194 aa12.56□□□□□ -0.4
SNX17-210ENST00000537606 PHLDA1Q8WV24 401 aaPredicted RBP12.56□□□□□ -0.4
SNX17-210ENST00000537606 FAM110AQ9BQ89 295 aa12.56□□□□□ -0.4
SNX17-210ENST00000537606 RHOHQ15669 191 aa12.56□□□□□ -0.4
SNX17-210ENST00000537606 IL17DQ8TAD2 202 aa12.56□□□□□ -0.4
SNX17-210ENST00000537606 TMEM263Q8WUH6 116 aaKnown RBP12.56□□□□□ -0.4
SNX17-210ENST00000537606 C9orf118A6NHY6 69 aa12.55□□□□□ -0.4
SNX17-210ENST00000537606 CEND1Q8N111 149 aa12.55□□□□□ -0.4
SNX17-210ENST00000537606 TMEM170BQ5T4T1 132 aa12.54□□□□□ -0.4
SNX17-210ENST00000537606 CSNK1G2-AS1Q8NCQ2 148 aa12.54□□□□□ -0.4
SNX17-210ENST00000537606 EDA2RQ9HAV5 297 aa12.54□□□□□ -0.4
SNX17-210ENST00000537606 RHODO00212 210 aa12.54□□□□□ -0.4
SNX17-210ENST00000537606 PCP4P48539 62 aa12.54□□□□□ -0.4
SNX17-210ENST00000537606 CEMP1Q6PRD7 247 aaPredicted RBP12.54□□□□□ -0.4
SNX17-210ENST00000537606 NHP2Q9NX24 153 aaKnown RBP12.54□□□□□ -0.4
SNX17-210ENST00000537606 PLEKHB2Q96CS7 222 aa12.53□□□□□ -0.4
SNX17-210ENST00000537606 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
SNX17-210ENST00000537606 ZNF815PA8K554 130 aa12.53□□□□□ -0.4
SNX17-210ENST00000537606 LINC01549A6NIU2 74 aa12.52□□□□□ -0.4
SNX17-210ENST00000537606 TM2D2Q9BX73 214 aa12.52□□□□□ -0.4
SNX17-210ENST00000537606 PLAC8L1A1L4L8 177 aa12.52□□□□□ -0.41
SNX17-210ENST00000537606 SMIM13P0DJ93 91 aa12.52□□□□□ -0.41
SNX17-210ENST00000537606 RNASE13Q5GAN3 156 aaKnown RBP12.52□□□□□ -0.41
SNX17-210ENST00000537606 TSPEAR-AS2P59090 65 aa12.51□□□□□ -0.41
SNX17-210ENST00000537606 IGLV4-3A0A075B6K6 122 aa12.51□□□□□ -0.41
SNX17-210ENST00000537606 TMEM238LA0A1B0GVL6 79 aa12.51□□□□□ -0.41
SNX17-210ENST00000537606 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
SNX17-210ENST00000537606 GAGE7O76087 117 aa12.51□□□□□ -0.41
SNX17-210ENST00000537606 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
SNX17-210ENST00000537606 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
SNX17-210ENST00000537606 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
SNX17-210ENST00000537606 C1QTNF4Q9BXJ3 329 aa12.51□□□□□ -0.41
SNX17-210ENST00000537606 TRBV7-3A0A075B6L6 115 aa12.5□□□□□ -0.41
SNX17-210ENST00000537606 RRN3P1Q2M238 152 aa12.5□□□□□ -0.41
SNX17-210ENST00000537606 FAM104AQ969W3 186 aa12.5□□□□□ -0.41
SNX17-210ENST00000537606 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.49□□□□□ -0.41
SNX17-210ENST00000537606 IGKV2-29A2NJV5 120 aaPredicted RBP12.49□□□□□ -0.41
SNX17-210ENST00000537606 GAGE10A6NGK3 116 aa12.49□□□□□ -0.41
SNX17-210ENST00000537606 SCGB1D4Q6XE38 83 aa12.49□□□□□ -0.41
SNX17-210ENST00000537606 IGHV3-64A0A075B6Q5 118 aa12.49□□□□□ -0.41
SNX17-210ENST00000537606 A0A0J9YXV3 536 aa12.49□□□□□ -0.41
SNX17-210ENST00000537606 PAPPA-AS1Q5QFB9 102 aa12.49□□□□□ -0.41
SNX17-210ENST00000537606 C16orf74Q96GX8 76 aa12.49□□□□□ -0.41
SNX17-210ENST00000537606 CITED1Q99966 193 aa12.49□□□□□ -0.41
SNX17-210ENST00000537606 CHCHD7Q9BUK0 85 aa12.48□□□□□ -0.41
SNX17-210ENST00000537606 VCX2Q9H322 139 aa12.48□□□□□ -0.41
SNX17-210ENST00000537606 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
SNX17-210ENST00000537606 DAZ2Q13117 558 aaKnown RBP12.48□□□□□ -0.41
SNX17-210ENST00000537606 A0A1W2PPM0 123 aa12.47□□□□□ -0.41
SNX17-210ENST00000537606 HERVK_113P61574 105 aa12.47□□□□□ -0.41
SNX17-210ENST00000537606 C9orf66Q5T8R8 295 aa12.47□□□□□ -0.41
SNX17-210ENST00000537606 SLC25A29Q8N8R3 303 aa12.47□□□□□ -0.41
SNX17-210ENST00000537606 DNAJC30Q96LL9 226 aa12.47□□□□□ -0.41
SNX17-210ENST00000537606 TRAV4A0A0B4J268 109 aa12.46□□□□□ -0.41
SNX17-210ENST00000537606 COTL1Q14019 142 aa12.46□□□□□ -0.41
SNX17-210ENST00000537606 SAMD5Q5TGI4 173 aa12.46□□□□□ -0.41
SNX17-210ENST00000537606 TAL2Q16559 108 aa12.46□□□□□ -0.42
SNX17-210ENST00000537606 NFE4Q86UQ8 179 aa12.46□□□□□ -0.42
SNX17-210ENST00000537606 INSL3P51460 131 aa12.45□□□□□ -0.42
SNX17-210ENST00000537606 C12orf74Q32Q52 190 aa12.45□□□□□ -0.42
SNX17-210ENST00000537606 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
SNX17-210ENST00000537606 K7EQD1 137 aa12.45□□□□□ -0.42
SNX17-210ENST00000537606 ZNF22P17026 224 aaPredicted RBP12.45□□□□□ -0.42
SNX17-210ENST00000537606 GAGE4Q13068 117 aa12.45□□□□□ -0.42
SNX17-210ENST00000537606 GAGE5Q13069 117 aa12.45□□□□□ -0.42
SNX17-210ENST00000537606 GAGE13Q4V321 117 aa12.45□□□□□ -0.42
SNX17-210ENST00000537606 K7EP34 96 aa12.44□□□□□ -0.42
SNX17-210ENST00000537606 CBY1Q9Y3M2 126 aa12.44□□□□□ -0.42
SNX17-210ENST00000537606 SPCS1Q9Y6A9 102 aa12.44□□□□□ -0.42
SNX17-210ENST00000537606 LOC100131303A0A0U1RQF7 123 aa12.43□□□□□ -0.42
SNX17-210ENST00000537606 J3QQQ9 107 aa12.43□□□□□ -0.42
SNX17-210ENST00000537606 SRSF9Q13242 221 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNX17-210ENST00000537606 UBE2D4Q9Y2X8 147 aa12.43□□□□□ -0.42
SNX17-210ENST00000537606 TMEM223A0PJW6 202 aa12.42□□□□□ -0.42
SNX17-210ENST00000537606 AMELXQ99217 191 aa12.42□□□□□ -0.42
SNX17-210ENST00000537606 A0A0J9YY99 117 aa12.42□□□□□ -0.42
SNX17-210ENST00000537606 FABP2P12104 132 aa12.42□□□□□ -0.42
SNX17-210ENST00000537606 RPL36AP83881 106 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms