RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 HELZ2Q9BYK8 2649 aaKnown RBP11.29□□□□□ -0.6
MKS1-204ENST00000537529 PF4P02776 101 aa11.29□□□□□ -0.6
MKS1-204ENST00000537529 GIG44P09565 113 aaPredicted RBP11.29□□□□□ -0.6
MKS1-204ENST00000537529 COTL1Q14019 142 aa11.29□□□□□ -0.6
MKS1-204ENST00000537529 CHCHD7Q9BUK0 85 aa11.29□□□□□ -0.6
MKS1-204ENST00000537529 RPL35AP18077 110 aaKnown RBP11.28□□□□□ -0.6
MKS1-204ENST00000537529 KRTAP10-3P60369 221 aa11.28□□□□□ -0.6
MKS1-204ENST00000537529 GTF2H5Q6ZYL4 71 aa11.28□□□□□ -0.6
MKS1-204ENST00000537529 C16orf74Q96GX8 76 aa11.28□□□□□ -0.6
MKS1-204ENST00000537529 TRAV4A0A0B4J268 109 aa11.28□□□□□ -0.6
MKS1-204ENST00000537529 GAGE10A6NGK3 116 aa11.28□□□□□ -0.6
MKS1-204ENST00000537529 AMELXQ99217 191 aa11.28□□□□□ -0.6
MKS1-204ENST00000537529 ACANP16112 2415 aa11.27□□□□□ -0.61
MKS1-204ENST00000537529 K7ERJ3 54 aa11.27□□□□□ -0.61
MKS1-204ENST00000537529 NAA38Q9BRA0 125 aaKnown RBP11.27□□□□□ -0.61
MKS1-204ENST00000537529 A0A1W2PPM0 123 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
MKS1-204ENST00000537529 LGALS3P17931 250 aaKnown RBP11.26□□□□□ -0.61
MKS1-204ENST00000537529 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
MKS1-204ENST00000537529 Q6ZTI0 123 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
MKS1-204ENST00000537529 PLEKHB2Q96CS7 222 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 IGHV3-38A0A0C4DH36 116 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 J3QQQ9 107 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 LEPROTO15243 131 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 LINC00482Q8N8I6 264 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 ZNF479Q96JC4 524 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 UBE2D4Q9Y2X8 147 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 ITPR2Q14571 2701 aa11.26□□□□□ -0.61
MKS1-204ENST00000537529 ANK3Q12955 4377 aaKnown RBP11.25□□□□□ -0.61
MKS1-204ENST00000537529 TRBV10-1A0A0K0K1A3 114 aa11.25□□□□□ -0.61
MKS1-204ENST00000537529 K7EP34 96 aa11.25□□□□□ -0.61
MKS1-204ENST00000537529 K7EQD1 137 aa11.25□□□□□ -0.61
MKS1-204ENST00000537529 TSPEAR-AS2P59090 65 aa11.25□□□□□ -0.61
MKS1-204ENST00000537529 SAMD5Q5TGI4 173 aa11.25□□□□□ -0.61
MKS1-204ENST00000537529 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
MKS1-204ENST00000537529 AKAP9Q99996 3911 aa11.25□□□□□ -0.61
MKS1-204ENST00000537529 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.24□□□□□ -0.61
MKS1-204ENST00000537529 IGKV2-29A2NJV5 120 aaPredicted RBP11.24□□□□□ -0.61
MKS1-204ENST00000537529 FABP2P12104 132 aa11.24□□□□□ -0.61
MKS1-204ENST00000537529 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
MKS1-204ENST00000537529 INAFM1C9JVW0 142 aa11.24□□□□□ -0.61
MKS1-204ENST00000537529 RPL36AP83881 106 aaKnown RBP11.24□□□□□ -0.61
MKS1-204ENST00000537529 C12orf74Q32Q52 190 aa11.24□□□□□ -0.61
MKS1-204ENST00000537529 CEMP1Q6PRD7 247 aaPredicted RBP11.24□□□□□ -0.61
MKS1-204ENST00000537529 RPL36ALQ969Q0 106 aaKnown RBP11.24□□□□□ -0.61
MKS1-204ENST00000537529 TMEM238LA0A1B0GVL6 79 aa11.23□□□□□ -0.61
MKS1-204ENST00000537529 A6NJY4 79 aa11.23□□□□□ -0.61
MKS1-204ENST00000537529 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
MKS1-204ENST00000537529 SRSF9Q13242 221 aaKnown RBP eCLIP11.23□□□□□ -0.61
MKS1-204ENST00000537529 RRN3P1Q2M238 152 aa11.23□□□□□ -0.61
MKS1-204ENST00000537529 CSNK1G2-AS1Q8NCQ2 148 aa11.23□□□□□ -0.61
MKS1-204ENST00000537529 A0A0J9YY99 117 aa11.23□□□□□ -0.61
MKS1-204ENST00000537529 SPCS1Q9Y6A9 102 aa11.23□□□□□ -0.61
MKS1-204ENST00000537529 HIVEP2P31629 2446 aa11.22□□□□□ -0.61
MKS1-204ENST00000537529 A0A1B0GWB2 263 aa11.22□□□□□ -0.61
MKS1-204ENST00000537529 PLAC8L1A1L4L8 177 aa11.22□□□□□ -0.61
MKS1-204ENST00000537529 OR5A1Q8NGJ0 315 aa11.22□□□□□ -0.61
MKS1-204ENST00000537529 SPANXB1Q9NS25 103 aaPredicted RBP11.22□□□□□ -0.61
MKS1-204ENST00000537529 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
MKS1-204ENST00000537529 WNK1Q9H4A3 2382 aa11.22□□□□□ -0.61
MKS1-204ENST00000537529 Q6ZUT4 128 aa11.21□□□□□ -0.61
MKS1-204ENST00000537529 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.61
MKS1-204ENST00000537529 CIDEAO60543 219 aa11.21□□□□□ -0.62
MKS1-204ENST00000537529 RNASE13Q5GAN3 156 aaKnown RBP11.21□□□□□ -0.62
MKS1-204ENST00000537529 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.62
MKS1-204ENST00000537529 OVOL2Q9BRP0 275 aa11.21□□□□□ -0.62
MKS1-204ENST00000537529 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.62
MKS1-204ENST00000537529 MTORP42345 2549 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 TRGV2A0A075B6R0 118 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 TINCRA0A1B0GVN0 87 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 IGLL5B9A064 214 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 GAGE12BA1L429 117 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 GAGE7O76087 117 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 GAGE12FP0CL80 117 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 GAGE12GP0CL81 117 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 GAGE12IP0CL82 117 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 SLC25A29Q8N8R3 303 aa11.2□□□□□ -0.62
MKS1-204ENST00000537529 NF1P21359 2839 aa11.19□□□□□ -0.62
MKS1-204ENST00000537529 IGHV3-64A0A075B6Q5 118 aa11.19□□□□□ -0.62
MKS1-204ENST00000537529 INSL3P51460 131 aa11.19□□□□□ -0.62
MKS1-204ENST00000537529 UBE2D3P61077 147 aa11.19□□□□□ -0.62
MKS1-204ENST00000537529 UBE2D2P62837 147 aa11.19□□□□□ -0.62
MKS1-204ENST00000537529 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
MKS1-204ENST00000537529 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
MKS1-204ENST00000537529 GAGE4Q13068 117 aa11.18□□□□□ -0.62
MKS1-204ENST00000537529 GAGE5Q13069 117 aa11.18□□□□□ -0.62
MKS1-204ENST00000537529 GAGE13Q4V321 117 aa11.18□□□□□ -0.62
MKS1-204ENST00000537529 SMAGPQ0VAQ4 97 aa11.17□□□□□ -0.62
MKS1-204ENST00000537529 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
MKS1-204ENST00000537529 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
MKS1-204ENST00000537529 TRBV6-4A0A1B0GX49 114 aa11.16□□□□□ -0.62
MKS1-204ENST00000537529 IGHV3-30-3P0DP02 117 aa11.16□□□□□ -0.62
MKS1-204ENST00000537529 FOSL1P15407 271 aa11.16□□□□□ -0.62
MKS1-204ENST00000537529 UBE2D1P51668 147 aa11.16□□□□□ -0.62
MKS1-204ENST00000537529 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
MKS1-204ENST00000537529 IGHV3-30P01768 117 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms