RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 COTL1Q14019 142 aa11.45□□□□□ -0.58
GPN3-202ENST00000537466 RMI2Q96E14 147 aa11.45□□□□□ -0.58
GPN3-202ENST00000537466 CRPP02741 224 aa11.44□□□□□ -0.58
GPN3-202ENST00000537466 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
GPN3-202ENST00000537466 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
GPN3-202ENST00000537466 SDHAF1A6NFY7 115 aa11.44□□□□□ -0.58
GPN3-202ENST00000537466 RPS10P46783 165 aaKnown RBP11.44□□□□□ -0.58
GPN3-202ENST00000537466 AMTP48728 403 aa11.44□□□□□ -0.58
GPN3-202ENST00000537466 CLPSL2Q6UWE3 100 aa11.44□□□□□ -0.58
GPN3-202ENST00000537466 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
GPN3-202ENST00000537466 KRTAP10-1P60331 282 aa11.43□□□□□ -0.58
GPN3-202ENST00000537466 LINC00269Q8N2A0 174 aa11.43□□□□□ -0.58
GPN3-202ENST00000537466 C20orf203Q8NBC4 194 aa11.43□□□□□ -0.58
GPN3-202ENST00000537466 KRTAP17-1Q9BYP8 105 aa11.43□□□□□ -0.58
GPN3-202ENST00000537466 PRR34Q9NV39 138 aa11.43□□□□□ -0.58
GPN3-202ENST00000537466 IGLV4-60A0A075B6I1 120 aa11.42□□□□□ -0.58
GPN3-202ENST00000537466 IGLV5-52A0A0A0MRZ9 124 aa11.42□□□□□ -0.58
GPN3-202ENST00000537466 SMKR1H3BMG3 65 aa11.42□□□□□ -0.58
GPN3-202ENST00000537466 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
GPN3-202ENST00000537466 C1orf43Q9BWL3 253 aa11.42□□□□□ -0.58
GPN3-202ENST00000537466 NCR2O95944 276 aa11.41□□□□□ -0.58
GPN3-202ENST00000537466 CAMPP49913 170 aa11.41□□□□□ -0.58
GPN3-202ENST00000537466 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
GPN3-202ENST00000537466 A0A1B0GUV1 79 aa11.4□□□□□ -0.58
GPN3-202ENST00000537466 UBE2L6O14933 153 aa11.4□□□□□ -0.58
GPN3-202ENST00000537466 GCSHP23434 173 aa11.4□□□□□ -0.58
GPN3-202ENST00000537466 MIAQ16674 131 aa11.4□□□□□ -0.58
GPN3-202ENST00000537466 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
GPN3-202ENST00000537466 TMEM70Q9BUB7 260 aa11.4□□□□□ -0.58
GPN3-202ENST00000537466 ST20Q9HBF5 79 aa11.4□□□□□ -0.58
GPN3-202ENST00000537466 I3L3M4 83 aa11.39□□□□□ -0.59
GPN3-202ENST00000537466 PMCHP20382 165 aa11.39□□□□□ -0.59
GPN3-202ENST00000537466 REG3AQ06141 175 aa11.39□□□□□ -0.59
GPN3-202ENST00000537466 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.38□□□□□ -0.59
GPN3-202ENST00000537466 APCSP02743 223 aa11.38□□□□□ -0.59
GPN3-202ENST00000537466 POLR2KP53803 58 aaKnown RBP11.38□□□□□ -0.59
GPN3-202ENST00000537466 PNRC1Q12796 327 aaPredicted RBP11.38□□□□□ -0.59
GPN3-202ENST00000537466 MRPL51Q4U2R6 128 aaKnown RBP11.38□□□□□ -0.59
GPN3-202ENST00000537466 FAM104BQ5XKR9 115 aa11.38□□□□□ -0.59
GPN3-202ENST00000537466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.38□□□□□ -0.59
GPN3-202ENST00000537466 A0A1B0GW15 77 aa11.38□□□□□ -0.59
GPN3-202ENST00000537466 A0A1B0GXF2 115 aa11.38□□□□□ -0.59
GPN3-202ENST00000537466 IGKV2-29A2NJV5 120 aaPredicted RBP11.38□□□□□ -0.59
GPN3-202ENST00000537466 TSHBP01222 138 aa11.38□□□□□ -0.59
GPN3-202ENST00000537466 KRTAP26-1Q6PEX3 210 aa11.38□□□□□ -0.59
GPN3-202ENST00000537466 NRACQ8N912 160 aa11.38□□□□□ -0.59
GPN3-202ENST00000537466 PPP1R2P9O14990 202 aa11.37□□□□□ -0.59
GPN3-202ENST00000537466 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
GPN3-202ENST00000537466 TMEM242Q9NWH2 141 aa11.37□□□□□ -0.59
GPN3-202ENST00000537466 IGLV10-54A0A075B6I4 117 aa11.36□□□□□ -0.59
GPN3-202ENST00000537466 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
GPN3-202ENST00000537466 ADCYAP1P18509 176 aa11.36□□□□□ -0.59
GPN3-202ENST00000537466 HBBP68871 147 aa11.36□□□□□ -0.59
GPN3-202ENST00000537466 KRTAP4-5Q9BYR2 181 aa11.36□□□□□ -0.59
GPN3-202ENST00000537466 PCLOQ9Y6V0 5065 aa11.35□□□□□ -0.59
GPN3-202ENST00000537466 XGP55808 180 aa11.35□□□□□ -0.59
GPN3-202ENST00000537466 MT-ND4LP03901 98 aa11.34□□□□□ -0.59
GPN3-202ENST00000537466 ESDP10768 282 aa11.34□□□□□ -0.59
GPN3-202ENST00000537466 AMMECR1LQ6DCA0 310 aa11.34□□□□□ -0.59
GPN3-202ENST00000537466 UQCC3Q6UW78 93 aa11.34□□□□□ -0.59
GPN3-202ENST00000537466 ANAPC16Q96DE5 110 aa11.34□□□□□ -0.59
GPN3-202ENST00000537466 H7C423 109 aa11.33□□□□□ -0.6
GPN3-202ENST00000537466 S100A8P05109 93 aa11.33□□□□□ -0.6
GPN3-202ENST00000537466 FGF6P10767 208 aa11.33□□□□□ -0.6
GPN3-202ENST00000537466 SUMO2P61956 95 aaKnown RBP11.33□□□□□ -0.6
GPN3-202ENST00000537466 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
GPN3-202ENST00000537466 DNAH8Q96JB1 4490 aa11.33□□□□□ -0.6
GPN3-202ENST00000537466 TMEM218A2RU14 115 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 USP17L23D6RBM5 183 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 PPP1R17O96001 155 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 TRAV8-4A0A0B4J246 113 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 IGKV3OR2-268A0A0C4DH90 116 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 LINC00862A6NCI5 91 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 F8W036 122 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 VCYO14598 125 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 CKS2P33552 79 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 LINC01620Q4KN68 170 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 ATP5L2Q7Z4Y8 100 aa11.32□□□□□ -0.6
GPN3-202ENST00000537466 D6R8Y8 96 aa11.31□□□□□ -0.6
GPN3-202ENST00000537466 HAMPP81172 84 aa11.31□□□□□ -0.6
GPN3-202ENST00000537466 COMMD7Q86VX2 200 aa11.31□□□□□ -0.6
GPN3-202ENST00000537466 FAM30AQ9NZY2 134 aa11.31□□□□□ -0.6
GPN3-202ENST00000537466 ABCA13Q86UQ4 5058 aa11.3□□□□□ -0.6
GPN3-202ENST00000537466 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
GPN3-202ENST00000537466 TNFRSF6BO95407 300 aa11.3□□□□□ -0.6
GPN3-202ENST00000537466 Q8N1X5 172 aa11.3□□□□□ -0.6
GPN3-202ENST00000537466 C7orf77A4D0Y5 90 aa11.29□□□□□ -0.6
GPN3-202ENST00000537466 ZNF25P17030 456 aaPredicted RBP11.29□□□□□ -0.6
GPN3-202ENST00000537466 C14orf177Q52M58 125 aa11.29□□□□□ -0.6
GPN3-202ENST00000537466 C20orf78Q9BR46 151 aa11.29□□□□□ -0.6
GPN3-202ENST00000537466 NPYP01303 97 aa11.28□□□□□ -0.6
GPN3-202ENST00000537466 PRSS1P07477 247 aa11.28□□□□□ -0.6
GPN3-202ENST00000537466 FCER1GP30273 86 aa11.28□□□□□ -0.6
GPN3-202ENST00000537466 KIR2DL4Q99706 377 aa11.28□□□□□ -0.6
GPN3-202ENST00000537466 MRPL52Q86TS9 123 aaKnown RBP11.27□□□□□ -0.6
GPN3-202ENST00000537466 BTF3L4Q96K17 158 aa11.27□□□□□ -0.6
GPN3-202ENST00000537466 SEC11CQ9BY50 192 aa11.27□□□□□ -0.6
GPN3-202ENST00000537466 RPL32P62910 135 aaKnown RBP11.26□□□□□ -0.61
GPN3-202ENST00000537466 OR5A1Q8NGJ0 315 aa11.26□□□□□ -0.61
GPN3-202ENST00000537466 TMEM101Q96IK0 257 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms