RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SRSF3P84103 164 aaKnown RBP11.3□□□□□ -0.6
SFSWAP-205ENST00000537164 PEA15Q15121 130 aa11.3□□□□□ -0.6
SFSWAP-205ENST00000537164 TMEM243Q9BU79 118 aa11.3□□□□□ -0.6
SFSWAP-205ENST00000537164 TMEM191AQ9H0A3 160 aa11.3□□□□□ -0.6
SFSWAP-205ENST00000537164 DNAH8Q96JB1 4490 aa11.3□□□□□ -0.6
SFSWAP-205ENST00000537164 COTL1Q14019 142 aa11.29□□□□□ -0.6
SFSWAP-205ENST00000537164 LINC00269Q8N2A0 174 aa11.29□□□□□ -0.6
SFSWAP-205ENST00000537164 BORCS7Q96B45 105 aa11.29□□□□□ -0.6
SFSWAP-205ENST00000537164 NAT8Q9UHE5 227 aa11.29□□□□□ -0.6
SFSWAP-205ENST00000537164 SRRM2Q9UQ35 2752 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-205ENST00000537164 TRBV6-5A0A0K0K1A5 114 aa11.28□□□□□ -0.6
SFSWAP-205ENST00000537164 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
SFSWAP-205ENST00000537164 C20orf203Q8NBC4 194 aa11.28□□□□□ -0.6
SFSWAP-205ENST00000537164 RPL39LQ96EH5 51 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-205ENST00000537164 FAT1Q14517 4588 aa11.28□□□□□ -0.6
SFSWAP-205ENST00000537164 NCR2O95944 276 aa11.27□□□□□ -0.61
SFSWAP-205ENST00000537164 Q6ZSA8 131 aa11.27□□□□□ -0.61
SFSWAP-205ENST00000537164 NUP35Q8NFH5 326 aa11.27□□□□□ -0.61
SFSWAP-205ENST00000537164 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
SFSWAP-205ENST00000537164 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
SFSWAP-205ENST00000537164 AMTP48728 403 aa11.26□□□□□ -0.61
SFSWAP-205ENST00000537164 REG3AQ06141 175 aa11.26□□□□□ -0.61
SFSWAP-205ENST00000537164 C14orf177Q52M58 125 aa11.26□□□□□ -0.61
SFSWAP-205ENST00000537164 IGLV4-60A0A075B6I1 120 aa11.25□□□□□ -0.61
SFSWAP-205ENST00000537164 ADIRFQ15847 76 aa11.25□□□□□ -0.61
SFSWAP-205ENST00000537164 RNF185Q96GF1 192 aa11.25□□□□□ -0.61
SFSWAP-205ENST00000537164 FAM30AQ9NZY2 134 aa11.25□□□□□ -0.61
SFSWAP-205ENST00000537164 NAT8BQ9UHF3 227 aa11.25□□□□□ -0.61
SFSWAP-205ENST00000537164 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
SFSWAP-205ENST00000537164 TRAV8-4A0A0B4J246 113 aa11.24□□□□□ -0.61
SFSWAP-205ENST00000537164 SMIM27A0A1W2PRY6 76 aa11.24□□□□□ -0.61
SFSWAP-205ENST00000537164 H7C423 109 aa11.24□□□□□ -0.61
SFSWAP-205ENST00000537164 RAB4AP20338 218 aa11.24□□□□□ -0.61
SFSWAP-205ENST00000537164 RIGQ13278 110 aa11.24□□□□□ -0.61
SFSWAP-205ENST00000537164 DEFB104AQ8WTQ1 72 aa11.24□□□□□ -0.61
SFSWAP-205ENST00000537164 EPM2AB3EWF7 344 aa11.23□□□□□ -0.61
SFSWAP-205ENST00000537164 UBE2L6O14933 153 aa11.23□□□□□ -0.61
SFSWAP-205ENST00000537164 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
SFSWAP-205ENST00000537164 CLPSL2Q6UWE3 100 aa11.23□□□□□ -0.61
SFSWAP-205ENST00000537164 MRAP2Q96G30 205 aa11.23□□□□□ -0.61
SFSWAP-205ENST00000537164 I3L3M4 83 aa11.22□□□□□ -0.61
SFSWAP-205ENST00000537164 POLR2KP53803 58 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-205ENST00000537164 USP17L23D6RBM5 183 aa11.21□□□□□ -0.61
SFSWAP-205ENST00000537164 HLA-DQA1P01909 254 aa11.21□□□□□ -0.61
SFSWAP-205ENST00000537164 AMN1Q8IY45 258 aa11.21□□□□□ -0.61
SFSWAP-205ENST00000537164 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
SFSWAP-205ENST00000537164 TRBV27A0A0K0K1C4 114 aa11.2□□□□□ -0.62
SFSWAP-205ENST00000537164 APCSP02743 223 aa11.2□□□□□ -0.62
SFSWAP-205ENST00000537164 RPS10P46783 165 aaKnown RBP11.2□□□□□ -0.62
SFSWAP-205ENST00000537164 A0A1B0GW15 77 aa11.19□□□□□ -0.62
SFSWAP-205ENST00000537164 PRSS1P07477 247 aa11.19□□□□□ -0.62
SFSWAP-205ENST00000537164 ESDP10768 282 aa11.19□□□□□ -0.62
SFSWAP-205ENST00000537164 PMCHP20382 165 aa11.19□□□□□ -0.62
SFSWAP-205ENST00000537164 Q5VSD8 79 aa11.19□□□□□ -0.62
SFSWAP-205ENST00000537164 IGLV10-54A0A075B6I4 117 aa11.18□□□□□ -0.62
SFSWAP-205ENST00000537164 PPP1R17O96001 155 aa11.18□□□□□ -0.62
SFSWAP-205ENST00000537164 TSHBP01222 138 aa11.18□□□□□ -0.62
SFSWAP-205ENST00000537164 ZNF25P17030 456 aaPredicted RBP11.18□□□□□ -0.62
SFSWAP-205ENST00000537164 LINC01620Q4KN68 170 aa11.18□□□□□ -0.62
SFSWAP-205ENST00000537164 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
SFSWAP-205ENST00000537164 DGAT2L7PQ6IED9 249 aa11.18□□□□□ -0.62
SFSWAP-205ENST00000537164 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.17□□□□□ -0.62
SFSWAP-205ENST00000537164 IGKV2-29A2NJV5 120 aaPredicted RBP11.17□□□□□ -0.62
SFSWAP-205ENST00000537164 SMR3BP02814 79 aaPredicted RBP11.17□□□□□ -0.62
SFSWAP-205ENST00000537164 FGF6P10767 208 aa11.17□□□□□ -0.62
SFSWAP-205ENST00000537164 HAMPP81172 84 aa11.17□□□□□ -0.62
SFSWAP-205ENST00000537164 NRACQ8N912 160 aa11.17□□□□□ -0.62
SFSWAP-205ENST00000537164 CLRN3Q8NCR9 226 aa11.17□□□□□ -0.62
SFSWAP-205ENST00000537164 RAB14P61106 215 aa11.16□□□□□ -0.62
SFSWAP-205ENST00000537164 AMMECR1LQ6DCA0 310 aa11.16□□□□□ -0.62
SFSWAP-205ENST00000537164 A0A1B0GXF2 115 aa11.15□□□□□ -0.62
SFSWAP-205ENST00000537164 LINC00862A6NCI5 91 aa11.15□□□□□ -0.62
SFSWAP-205ENST00000537164 MRPL51Q4U2R6 128 aaKnown RBP11.15□□□□□ -0.62
SFSWAP-205ENST00000537164 MRPL52Q86TS9 123 aaKnown RBP11.15□□□□□ -0.62
SFSWAP-205ENST00000537164 TMEM242Q9NWH2 141 aa11.15□□□□□ -0.62
SFSWAP-205ENST00000537164 TRBV24-1A0A075B6N3 115 aa11.14□□□□□ -0.63
SFSWAP-205ENST00000537164 SMKR1H3BMG3 65 aa11.14□□□□□ -0.63
SFSWAP-205ENST00000537164 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
SFSWAP-205ENST00000537164 VCYO14598 125 aa11.14□□□□□ -0.63
SFSWAP-205ENST00000537164 SUMO2P61956 95 aaKnown RBP11.14□□□□□ -0.63
SFSWAP-205ENST00000537164 CLLU1Q5K131 121 aa11.14□□□□□ -0.63
SFSWAP-205ENST00000537164 RNASEKQ6P5S7 137 aaKnown RBP11.14□□□□□ -0.63
SFSWAP-205ENST00000537164 C9orf163Q8N9P6 203 aa11.14□□□□□ -0.63
SFSWAP-205ENST00000537164 PPP1R2P9O14990 202 aa11.13□□□□□ -0.63
SFSWAP-205ENST00000537164 S100A8P05109 93 aa11.13□□□□□ -0.63
SFSWAP-205ENST00000537164 CAMPP49913 170 aa11.13□□□□□ -0.63
SFSWAP-205ENST00000537164 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
SFSWAP-205ENST00000537164 PNRC1Q12796 327 aaPredicted RBP11.13□□□□□ -0.63
SFSWAP-205ENST00000537164 CHAC1Q9BUX1 264 aa11.13□□□□□ -0.63
SFSWAP-205ENST00000537164 RPL32P62910 135 aaKnown RBP11.12□□□□□ -0.63
SFSWAP-205ENST00000537164 HBBP68871 147 aa11.12□□□□□ -0.63
SFSWAP-205ENST00000537164 SCXQ7RTU7 201 aa11.12□□□□□ -0.63
SFSWAP-205ENST00000537164 OR5A1Q8NGJ0 315 aa11.12□□□□□ -0.63
SFSWAP-205ENST00000537164 C20orf78Q9BR46 151 aa11.12□□□□□ -0.63
SFSWAP-205ENST00000537164 C7orf77A4D0Y5 90 aa11.11□□□□□ -0.63
SFSWAP-205ENST00000537164 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
SFSWAP-205ENST00000537164 TMEM101Q96IK0 257 aa11.11□□□□□ -0.63
SFSWAP-205ENST00000537164 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
SFSWAP-205ENST00000537164 F8W036 122 aa11.1□□□□□ -0.63
SFSWAP-205ENST00000537164 MRPL54Q6P161 138 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms