RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 H3BUT2 72 aa6.7□□□□□ -1.34
UBE3B-207ENST00000537063 K7EP34 96 aa6.7□□□□□ -1.34
UBE3B-207ENST00000537063 TSPEAR-AS2P59090 65 aa6.7□□□□□ -1.34
UBE3B-207ENST00000537063 EMP1P54849 157 aa6.7□□□□□ -1.34
UBE3B-207ENST00000537063 KRTAP10-3P60369 221 aa6.7□□□□□ -1.34
UBE3B-207ENST00000537063 SPANXA1Q9NS26 97 aa6.7□□□□□ -1.34
UBE3B-207ENST00000537063 NDUFA11Q86Y39 141 aa6.69□□□□□ -1.34
UBE3B-207ENST00000537063 PLEKHB2Q96CS7 222 aa6.69□□□□□ -1.34
UBE3B-207ENST00000537063 PLAC8L1A1L4L8 177 aa6.69□□□□□ -1.34
UBE3B-207ENST00000537063 ZNF22P17026 224 aaPredicted RBP6.69□□□□□ -1.34
UBE3B-207ENST00000537063 DAZ2Q13117 558 aaKnown RBP6.69□□□□□ -1.34
UBE3B-207ENST00000537063 CSNK1G2-AS1Q8NCQ2 148 aa6.69□□□□□ -1.34
UBE3B-207ENST00000537063 HIST1H4GQ99525 98 aa6.69□□□□□ -1.34
UBE3B-207ENST00000537063 SMR3AQ99954 134 aa6.69□□□□□ -1.34
UBE3B-207ENST00000537063 SPANXB1Q9NS25 103 aaPredicted RBP6.69□□□□□ -1.34
UBE3B-207ENST00000537063 UBE2D4Q9Y2X8 147 aa6.69□□□□□ -1.34
UBE3B-207ENST00000537063 K7ERJ3 54 aa6.69□□□□□ -1.34
UBE3B-207ENST00000537063 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
UBE3B-207ENST00000537063 LEPROTO15243 131 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 LY6G6DO95868 133 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 NHP2Q9NX24 153 aaKnown RBP6.68□□□□□ -1.34
UBE3B-207ENST00000537063 SETXQ7Z333 2677 aaKnown RBP6.68□□□□□ -1.34
UBE3B-207ENST00000537063 TRAV4A0A0B4J268 109 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 A0A0J9YY99 117 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 GTF2H5Q6ZYL4 71 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 RAB37Q96AX2 223 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 VCX2Q9H322 139 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 C12orf74Q32Q52 190 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 TMEM170BQ5T4T1 132 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
UBE3B-207ENST00000537063 GAGE10A6NGK3 116 aa6.67□□□□□ -1.34
UBE3B-207ENST00000537063 SAMD5Q5TGI4 173 aa6.67□□□□□ -1.34
UBE3B-207ENST00000537063 ACANP16112 2415 aa6.67□□□□□ -1.34
UBE3B-207ENST00000537063 TRBV10-1A0A0K0K1A3 114 aa6.67□□□□□ -1.34
UBE3B-207ENST00000537063 J3QQQ9 107 aa6.67□□□□□ -1.34
UBE3B-207ENST00000537063 LINC00482Q8N8I6 264 aa6.67□□□□□ -1.34
UBE3B-207ENST00000537063 C16orf74Q96GX8 76 aa6.67□□□□□ -1.34
UBE3B-207ENST00000537063 A0A0J9YXV3 536 aa6.67□□□□□ -1.34
UBE3B-207ENST00000537063 WFDC10AQ9H1F0 79 aa6.67□□□□□ -1.34
UBE3B-207ENST00000537063 TRGV1A0A0A0MS02 117 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 IGLL5B9A064 214 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 UBE2D1P51668 147 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 Q6ZTI0 123 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 SLC25A29Q8N8R3 303 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 NAA38Q9BRA0 125 aaKnown RBP6.66□□□□□ -1.34
UBE3B-207ENST00000537063 OVOL2Q9BRP0 275 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 GCN1Q92616 2671 aaKnown RBP6.66□□□□□ -1.34
UBE3B-207ENST00000537063 TINCRA0A1B0GVN0 87 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 K7EQD1 137 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 COTL1Q14019 142 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 ZNF479Q96JC4 524 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 C1QTNF4Q9BXJ3 329 aa6.66□□□□□ -1.34
UBE3B-207ENST00000537063 FABP2P12104 132 aa6.65□□□□□ -1.34
UBE3B-207ENST00000537063 IGHV3OR16-12A0A075B7B8 117 aa6.65□□□□□ -1.34
UBE3B-207ENST00000537063 GAGE12BA1L429 117 aa6.65□□□□□ -1.34
UBE3B-207ENST00000537063 CIDEAO60543 219 aa6.65□□□□□ -1.34
UBE3B-207ENST00000537063 CEMP1Q6PRD7 247 aaPredicted RBP6.65□□□□□ -1.34
UBE3B-207ENST00000537063 SPCS1Q9Y6A9 102 aa6.65□□□□□ -1.34
UBE3B-207ENST00000537063 SCGB1D4Q6XE38 83 aa6.65□□□□□ -1.35
UBE3B-207ENST00000537063 OTOGQ6ZRI0 2925 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.64□□□□□ -1.35
UBE3B-207ENST00000537063 IGKV2-29A2NJV5 120 aaPredicted RBP6.64□□□□□ -1.35
UBE3B-207ENST00000537063 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 LGALS3P17931 250 aaKnown RBP6.64□□□□□ -1.35
UBE3B-207ENST00000537063 RRN3P1Q2M238 152 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 FAM19A3Q7Z5A8 133 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 SBSPONQ8IVN8 264 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 IGLV5-45A0A087WSX0 123 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 UBE2D3P61077 147 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 UBE2D2P62837 147 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 Q6ZUT4 128 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 FASNP49327 2511 aaKnown RBP6.64□□□□□ -1.35
UBE3B-207ENST00000537063 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 A6NJY4 79 aa6.64□□□□□ -1.35
UBE3B-207ENST00000537063 DAZ4Q86SG3 579 aaKnown RBP6.64□□□□□ -1.35
UBE3B-207ENST00000537063 DAZ3Q9NR90 486 aaKnown RBP6.64□□□□□ -1.35
UBE3B-207ENST00000537063 CSDC2Q9Y534 153 aaKnown RBP6.64□□□□□ -1.35
UBE3B-207ENST00000537063 NIPBLQ6KC79 2804 aaeCLIP6.64□□□□□ -1.35
UBE3B-207ENST00000537063 IGHV3-38A0A0C4DH36 116 aa6.63□□□□□ -1.35
UBE3B-207ENST00000537063 NOP10Q9NPE3 64 aaKnown RBP6.63□□□□□ -1.35
UBE3B-207ENST00000537063 WNK1Q9H4A3 2382 aa6.63□□□□□ -1.35
UBE3B-207ENST00000537063 MTORP42345 2549 aa6.63□□□□□ -1.35
UBE3B-207ENST00000537063 RPL35AP18077 110 aaKnown RBP6.63□□□□□ -1.35
UBE3B-207ENST00000537063 IGHV3-30-3P0DP02 117 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 RPL36AP83881 106 aaKnown RBP6.62□□□□□ -1.35
UBE3B-207ENST00000537063 NTM-AS1Q6ZSK4 140 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 RPL36ALQ969Q0 106 aaKnown RBP6.62□□□□□ -1.35
UBE3B-207ENST00000537063 GTSF1LQ9H1H1 148 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 IGHV1-58A0A0C4DH39 117 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 TIRAPP58753 221 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 RBX1P62877 108 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 C10orf126Q8N4M7 172 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 TRBV6-4A0A1B0GX49 114 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 SRSF9Q13242 221 aaKnown RBP eCLIP6.62□□□□□ -1.35
UBE3B-207ENST00000537063 LINC00612Q8N6U2 182 aa6.62□□□□□ -1.35
UBE3B-207ENST00000537063 OCIAD2Q56VL3 154 aa6.61□□□□□ -1.35
UBE3B-207ENST00000537063 RNASE13Q5GAN3 156 aaKnown RBP6.61□□□□□ -1.35
UBE3B-207ENST00000537063 LITAFQ99732 161 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms