RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 PPIFP30405 207 aaKnown RBP4.39□□□□□ -1.71
CHD4-206ENST00000536999 RNASE4P34096 147 aaKnown RBP4.39□□□□□ -1.71
CHD4-206ENST00000536999 ZNF415Q09FC8 603 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 ECSCRQ19T08 205 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 ANXA2RQ3ZCQ2 193 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 Q8N1Y9 231 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 C15orf53Q8NAA6 179 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 TMEM263Q8WUH6 116 aaKnown RBP4.39□□□□□ -1.71
CHD4-206ENST00000536999 FAM110AQ9BQ89 295 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 TIMM21Q9BVV7 248 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 KLK15Q9H2R5 256 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 DAZ1Q9NQZ3 744 aaKnown RBP4.39□□□□□ -1.71
CHD4-206ENST00000536999 IGLV4-69A0A075B6H9 119 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 TRAV26-2A0A0B4J265 109 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 TRBV7-7A0A0K0K1E9 115 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 A4D1N5 150 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 ATP6V0E1O15342 81 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 ZNF22P17026 224 aaPredicted RBP4.38□□□□□ -1.71
CHD4-206ENST00000536999 RPL11P62913 178 aaKnown RBP4.38□□□□□ -1.71
CHD4-206ENST00000536999 KRTAP1-1Q07627 177 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 CFAP161Q6P656 301 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 LINC00643Q86TS7 51 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 C20orf203Q8NBC4 194 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 CLUHP3Q96NS8 147 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 SIRPDQ9H106 197 aa4.38□□□□□ -1.71
CHD4-206ENST00000536999 KMT2CQ8NEZ4 4911 aaKnown RBP4.38□□□□□ -1.71
CHD4-206ENST00000536999 IGHV1-58A0A0C4DH39 117 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 TINCRA0A1B0GVN0 87 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 NPFFO15130 113 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 CRYGDP07320 174 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 PRSS2P07478 247 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
CHD4-206ENST00000536999 INSL3P51460 131 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 HERV-K104P63124 156 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 MRPS36P82909 103 aaKnown RBP4.37□□□□□ -1.71
CHD4-206ENST00000536999 NDPQ00604 133 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 MIAQ16674 131 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 S100A7L2Q5SY68 101 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 C22orf34Q6ZV56 151 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 C5orf56Q8N8D9 126 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 AJUBAQ96IF1 538 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 CCDC140Q96MF4 163 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 CCL19Q99731 98 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 TNFRSF18Q9Y5U5 241 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 KIF25-AS1Q9Y6Z4 181 aa4.37□□□□□ -1.71
CHD4-206ENST00000536999 B5MCH6 92 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 LST1O00453 97 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 SOCS3O14543 225 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 UQCRQO14949 82 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 TRACP01848 142 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
CHD4-206ENST00000536999 GATA3P23771 443 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 TIRAPP58753 221 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 FAM222AQ5U5X8 452 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 MUSTN1Q8IVN3 82 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 MAPK1IP1LQ8NDC0 245 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 KLHL30-AS1Q8NEE0 82 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 NTN5Q8WTR8 489 aaPredicted RBP4.36□□□□□ -1.71
CHD4-206ENST00000536999 C9orf85Q96MD7 179 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 ICOSQ9Y6W8 199 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
CHD4-206ENST00000536999 RYR3Q15413 4870 aa4.36□□□□□ -1.71
CHD4-206ENST00000536999 IGHV1OR15-1A0A075B7D0 117 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 TRAV13-2A0A0B4J235 113 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 M0QY20 66 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 GAS8-AS1O95177 125 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 IGHV3-23P01764 117 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 IGHG2P01859 326 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
CHD4-206ENST00000536999 HERVK_113P63121 156 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 ZNF56Q15929 161 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 TMEM95Q3KNT9 176 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 IGFL4Q6B9Z1 124 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 DAND5Q8N907 189 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
CHD4-206ENST00000536999 AMELXQ99217 191 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 SPXQ9BT56 116 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 RHPN1-AS1Q9BWJ2 59 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 NDUFA12Q9UI09 145 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 S4R3C0 116 aa4.35□□□□□ -1.71
CHD4-206ENST00000536999 MALRD1Q5VYJ5 2156 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 TRRAPQ9Y4A5 3859 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 A0A1B0GX51 115 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 H0YGX0 51 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 H3BQ85 93 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 ATOX1O00244 68 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 NDUFA1O15239 70 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 TSHBP01222 138 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 IGHV3-30-3P0DP02 117 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 CD28P10747 220 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 SAA4P35542 130 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 LINC00315P59091 139 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 C19orf54Q5BKX5 351 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 MEIG1Q5JSS6 88 aa4.34□□□□□ -1.71
CHD4-206ENST00000536999 DGAT2L7PQ6IED9 249 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 335.1 ms