RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 TWIST1Q15672 202 aa8.53□□□□□ -1.04
MRPS35-202ENST00000536569 C20orf203Q8NBC4 194 aa8.53□□□□□ -1.04
MRPS35-202ENST00000536569 UBE2L6O14933 153 aa8.52□□□□□ -1.05
MRPS35-202ENST00000536569 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
MRPS35-202ENST00000536569 BLOC1S1P78537 153 aa8.52□□□□□ -1.05
MRPS35-202ENST00000536569 CLPSL2Q6UWE3 100 aa8.52□□□□□ -1.05
MRPS35-202ENST00000536569 TEX261Q6UWH6 196 aa8.52□□□□□ -1.05
MRPS35-202ENST00000536569 OCC1Q8TAD7 63 aa8.52□□□□□ -1.05
MRPS35-202ENST00000536569 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
MRPS35-202ENST00000536569 Q6ZNX1 250 aa8.51□□□□□ -1.05
MRPS35-202ENST00000536569 SMIM15Q7Z3B0 74 aa8.51□□□□□ -1.05
MRPS35-202ENST00000536569 RNASE7Q9H1E1 156 aaKnown RBP8.51□□□□□ -1.05
MRPS35-202ENST00000536569 IGLV4-60A0A075B6I1 120 aa8.5□□□□□ -1.05
MRPS35-202ENST00000536569 K7EN84 100 aa8.5□□□□□ -1.05
MRPS35-202ENST00000536569 NDUFS6O75380 124 aaKnown RBP8.5□□□□□ -1.05
MRPS35-202ENST00000536569 NCR2O95944 276 aa8.5□□□□□ -1.05
MRPS35-202ENST00000536569 AMTP48728 403 aa8.5□□□□□ -1.05
MRPS35-202ENST00000536569 FAM231DQ6ZW35 169 aa8.5□□□□□ -1.05
MRPS35-202ENST00000536569 LYPD6BQ8NI32 183 aa8.5□□□□□ -1.05
MRPS35-202ENST00000536569 FAM210AQ96ND0 272 aa8.5□□□□□ -1.05
MRPS35-202ENST00000536569 IGLV10-54A0A075B6I4 117 aa8.49□□□□□ -1.05
MRPS35-202ENST00000536569 A8MWL6 223 aa8.49□□□□□ -1.05
MRPS35-202ENST00000536569 H7C423 109 aa8.49□□□□□ -1.05
MRPS35-202ENST00000536569 OXTP01178 125 aa8.49□□□□□ -1.05
MRPS35-202ENST00000536569 SDIM1Q6ZPB5 146 aa8.49□□□□□ -1.05
MRPS35-202ENST00000536569 AKAP14Q86UN6 197 aa8.49□□□□□ -1.05
MRPS35-202ENST00000536569 GATD1Q8NB37 220 aa8.49□□□□□ -1.05
MRPS35-202ENST00000536569 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.48□□□□□ -1.05
MRPS35-202ENST00000536569 hDV102S1A0JD36 115 aa8.48□□□□□ -1.05
MRPS35-202ENST00000536569 GATCO43716 136 aaKnown RBP8.48□□□□□ -1.05
MRPS35-202ENST00000536569 FOXA3P55318 350 aaPredicted RBP8.48□□□□□ -1.05
MRPS35-202ENST00000536569 CT83Q5H943 113 aa8.48□□□□□ -1.05
MRPS35-202ENST00000536569 CFAP161Q6P656 301 aa8.48□□□□□ -1.05
MRPS35-202ENST00000536569 GTSF1Q8WW33 167 aa8.48□□□□□ -1.05
MRPS35-202ENST00000536569 AP5S1Q9NUS5 200 aa8.48□□□□□ -1.05
MRPS35-202ENST00000536569 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
MRPS35-202ENST00000536569 GFRA4Q9GZZ7 299 aa8.47□□□□□ -1.05
MRPS35-202ENST00000536569 IGHV3-64A0A075B6Q5 118 aa8.46□□□□□ -1.06
MRPS35-202ENST00000536569 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.06
MRPS35-202ENST00000536569 ALKAL2Q6UX46 152 aa8.46□□□□□ -1.06
MRPS35-202ENST00000536569 RNF185Q96GF1 192 aa8.46□□□□□ -1.06
MRPS35-202ENST00000536569 TRAV26-2A0A0B4J265 109 aa8.45□□□□□ -1.06
MRPS35-202ENST00000536569 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
MRPS35-202ENST00000536569 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
MRPS35-202ENST00000536569 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
MRPS35-202ENST00000536569 AMMECR1LQ6DCA0 310 aa8.45□□□□□ -1.06
MRPS35-202ENST00000536569 BORCS7Q96B45 105 aa8.45□□□□□ -1.06
MRPS35-202ENST00000536569 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.45□□□□□ -1.06
MRPS35-202ENST00000536569 SDHAF1A6NFY7 115 aa8.44□□□□□ -1.06
MRPS35-202ENST00000536569 I3L3M4 83 aa8.44□□□□□ -1.06
MRPS35-202ENST00000536569 APCSP02743 223 aa8.44□□□□□ -1.06
MRPS35-202ENST00000536569 RPL39LQ96EH5 51 aaKnown RBP8.44□□□□□ -1.06
MRPS35-202ENST00000536569 SERTAD4-AS1Q5TG53 156 aa8.43□□□□□ -1.06
MRPS35-202ENST00000536569 TSKUQ8WUA8 353 aa8.43□□□□□ -1.06
MRPS35-202ENST00000536569 A0A1B0GUT8 65 aa8.42□□□□□ -1.06
MRPS35-202ENST00000536569 GAGE12HA6NDE8 117 aa8.42□□□□□ -1.06
MRPS35-202ENST00000536569 SLPIP03973 132 aa8.42□□□□□ -1.06
MRPS35-202ENST00000536569 FGF6P10767 208 aa8.42□□□□□ -1.06
MRPS35-202ENST00000536569 LINC01551Q86U37 167 aa8.42□□□□□ -1.06
MRPS35-202ENST00000536569 SMIM7Q9BQ49 75 aa8.42□□□□□ -1.06
MRPS35-202ENST00000536569 EIF5A2Q9GZV4 153 aaKnown RBP8.42□□□□□ -1.06
MRPS35-202ENST00000536569 TMEM191AQ9H0A3 160 aa8.42□□□□□ -1.06
MRPS35-202ENST00000536569 OSTCQ9NRP0 149 aa8.42□□□□□ -1.06
MRPS35-202ENST00000536569 PANO1I0J062 215 aa8.41□□□□□ -1.06
MRPS35-202ENST00000536569 PMCHP20382 165 aa8.41□□□□□ -1.06
MRPS35-202ENST00000536569 RNASEKQ6P5S7 137 aaKnown RBP8.41□□□□□ -1.06
MRPS35-202ENST00000536569 C15orf56Q8N910 161 aa8.41□□□□□ -1.06
MRPS35-202ENST00000536569 CHCHD10Q8WYQ3 142 aaPredicted RBP8.41□□□□□ -1.06
MRPS35-202ENST00000536569 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
MRPS35-202ENST00000536569 BTF3L4Q96K17 158 aa8.41□□□□□ -1.06
MRPS35-202ENST00000536569 ST20Q9HBF5 79 aa8.41□□□□□ -1.06
MRPS35-202ENST00000536569 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.4□□□□□ -1.06
MRPS35-202ENST00000536569 IGKV2-29A2NJV5 120 aaPredicted RBP8.4□□□□□ -1.06
MRPS35-202ENST00000536569 HIGD1CA8MV81 97 aa8.4□□□□□ -1.06
MRPS35-202ENST00000536569 ESDP10768 282 aa8.4□□□□□ -1.06
MRPS35-202ENST00000536569 RPS10P46783 165 aaKnown RBP8.4□□□□□ -1.06
MRPS35-202ENST00000536569 CEBPGP53567 150 aa8.4□□□□□ -1.06
MRPS35-202ENST00000536569 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
MRPS35-202ENST00000536569 SPACA4Q8TDM5 124 aa8.4□□□□□ -1.06
MRPS35-202ENST00000536569 MRAP2Q96G30 205 aa8.4□□□□□ -1.06
MRPS35-202ENST00000536569 GVQW2A0A096LPI5 108 aaPredicted RBP8.39□□□□□ -1.07
MRPS35-202ENST00000536569 IGKV3OR2-268A0A0C4DH90 116 aa8.39□□□□□ -1.07
MRPS35-202ENST00000536569 TRBV27A0A0K0K1C4 114 aa8.39□□□□□ -1.07
MRPS35-202ENST00000536569 ZNF727A8MUV8 499 aa8.39□□□□□ -1.07
MRPS35-202ENST00000536569 PPP1R17O96001 155 aa8.39□□□□□ -1.07
MRPS35-202ENST00000536569 MRPL52Q86TS9 123 aaKnown RBP8.39□□□□□ -1.07
MRPS35-202ENST00000536569 DPH3Q96FX2 82 aa8.39□□□□□ -1.07
MRPS35-202ENST00000536569 PKIGQ9Y2B9 76 aa8.39□□□□□ -1.07
MRPS35-202ENST00000536569 A0A087WYN8 130 aa8.38□□□□□ -1.07
MRPS35-202ENST00000536569 TSHBP01222 138 aa8.38□□□□□ -1.07
MRPS35-202ENST00000536569 SRP19P09132 144 aaKnown RBP8.38□□□□□ -1.07
MRPS35-202ENST00000536569 POLR2KP53803 58 aaKnown RBP8.38□□□□□ -1.07
MRPS35-202ENST00000536569 FOXI1Q12951 378 aa8.38□□□□□ -1.07
MRPS35-202ENST00000536569 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
MRPS35-202ENST00000536569 Q6ZRU5 148 aa8.38□□□□□ -1.07
MRPS35-202ENST00000536569 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
MRPS35-202ENST00000536569 LRP1Q07954 4544 aaKnown RBP8.37□□□□□ -1.07
MRPS35-202ENST00000536569 hCG_2014768A0A024R1R8 64 aa8.37□□□□□ -1.07
MRPS35-202ENST00000536569 RAB4AP20338 218 aa8.37□□□□□ -1.07
MRPS35-202ENST00000536569 SMAGPQ0VAQ4 97 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms