RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 BVES-AS1Q5T3Y7 98 aa16.21■□□□□ 0.18
HMGA2-206ENST00000536545 GAGE12BA1L429 117 aa16.2■□□□□ 0.18
HMGA2-206ENST00000536545 C11orf86A6NJI1 115 aa16.2■□□□□ 0.18
HMGA2-206ENST00000536545 GAGE7O76087 117 aa16.2■□□□□ 0.18
HMGA2-206ENST00000536545 GAGE12FP0CL80 117 aa16.2■□□□□ 0.18
HMGA2-206ENST00000536545 GAGE12GP0CL81 117 aa16.2■□□□□ 0.18
HMGA2-206ENST00000536545 GAGE12IP0CL82 117 aa16.2■□□□□ 0.18
HMGA2-206ENST00000536545 C12orf54Q6X4T0 127 aa16.2■□□□□ 0.18
HMGA2-206ENST00000536545 OPRPNQ99935 248 aaPredicted RBP16.2■□□□□ 0.18
HMGA2-206ENST00000536545 TTTY13Q9BZ97 58 aa16.2■□□□□ 0.18
HMGA2-206ENST00000536545 PYGO1Q9Y3Y4 419 aa16.2■□□□□ 0.18
HMGA2-206ENST00000536545 IGLV4-3A0A075B6K6 122 aa16.19■□□□□ 0.18
HMGA2-206ENST00000536545 KRTAP24-1Q3LI83 254 aa16.19■□□□□ 0.18
HMGA2-206ENST00000536545 PAPPA-AS1Q5QFB9 102 aa16.18■□□□□ 0.18
HMGA2-206ENST00000536545 PHLDA1Q8WV24 401 aaPredicted RBP16.18■□□□□ 0.18
HMGA2-206ENST00000536545 IGHV3-38A0A0C4DH36 116 aa16.18■□□□□ 0.18
HMGA2-206ENST00000536545 COTL1Q14019 142 aa16.18■□□□□ 0.18
HMGA2-206ENST00000536545 TRBV7-3A0A075B6L6 115 aa16.17■□□□□ 0.18
HMGA2-206ENST00000536545 TRGV2A0A075B6R0 118 aa16.17■□□□□ 0.18
HMGA2-206ENST00000536545 TMEM97Q5BJF2 176 aa16.17■□□□□ 0.18
HMGA2-206ENST00000536545 FAM104AQ969W3 186 aa16.17■□□□□ 0.18
HMGA2-206ENST00000536545 X6R8D5 127 aa16.17■□□□□ 0.18
HMGA2-206ENST00000536545 CIDEAO60543 219 aa16.16■□□□□ 0.18
HMGA2-206ENST00000536545 SLC25A29Q8N8R3 303 aa16.16■□□□□ 0.18
HMGA2-206ENST00000536545 ZNRF2Q8NHG8 242 aa16.16■□□□□ 0.18
HMGA2-206ENST00000536545 NPSP0C0P6 89 aa16.15■□□□□ 0.18
HMGA2-206ENST00000536545 EMP1P54849 157 aa16.15■□□□□ 0.18
HMGA2-206ENST00000536545 E9PLD3 99 aa16.15■□□□□ 0.18
HMGA2-206ENST00000536545 RPL36AP83881 106 aaKnown RBP16.15■□□□□ 0.18
HMGA2-206ENST00000536545 NFE4Q86UQ8 179 aa16.15■□□□□ 0.18
HMGA2-206ENST00000536545 KIR2DL5BQ8NHK3 375 aa16.15■□□□□ 0.18
HMGA2-206ENST00000536545 RPL36ALQ969Q0 106 aaKnown RBP16.15■□□□□ 0.18
HMGA2-206ENST00000536545 HIGD1BQ9P298 99 aa16.15■□□□□ 0.18
HMGA2-206ENST00000536545 SPANXA1Q9NS26 97 aa16.14■□□□□ 0.17
HMGA2-206ENST00000536545 UBE2D3P61077 147 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 UBE2D2P62837 147 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 HSD52Q0P140 79 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 LINC00612Q8N6U2 182 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 MAPKAPK5-AS1Q8N8E1 139 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 UBE2D4Q9Y2X8 147 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 TRRAPQ9Y4A5 3859 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.13■□□□□ 0.17
HMGA2-206ENST00000536545 TRAV8-6A0A0B4J262 113 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 IGKV2-29A2NJV5 120 aaPredicted RBP16.13■□□□□ 0.17
HMGA2-206ENST00000536545 SMIM9A6NGZ8 99 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 CRYBA4P53673 196 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 OR11H2Q8NH07 326 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 AMELXQ99217 191 aa16.13■□□□□ 0.17
HMGA2-206ENST00000536545 ZMAT5Q9UDW3 170 aaKnown RBP16.13■□□□□ 0.17
HMGA2-206ENST00000536545 PRADC1Q9BSG0 188 aa16.12■□□□□ 0.17
HMGA2-206ENST00000536545 BAHCC1Q9P281 2608 aa16.12■□□□□ 0.17
HMGA2-206ENST00000536545 TRBV25-1A0A075B6N4 114 aa16.11■□□□□ 0.17
HMGA2-206ENST00000536545 TRBV6-4A0A1B0GX49 114 aa16.11■□□□□ 0.17
HMGA2-206ENST00000536545 CEMP1Q6PRD7 247 aaPredicted RBP16.11■□□□□ 0.17
HMGA2-206ENST00000536545 DAZ4Q86SG3 579 aaKnown RBP16.11■□□□□ 0.17
HMGA2-206ENST00000536545 VCX2Q9H322 139 aa16.11■□□□□ 0.17
HMGA2-206ENST00000536545 DAZ3Q9NR90 486 aaKnown RBP16.11■□□□□ 0.17
HMGA2-206ENST00000536545 CYSRT1A8MQ03 144 aa16.1■□□□□ 0.17
HMGA2-206ENST00000536545 APOC4P55056 127 aa16.1■□□□□ 0.17
HMGA2-206ENST00000536545 CHAC1Q9BUX1 264 aa16.1■□□□□ 0.17
HMGA2-206ENST00000536545 GAGE12JA6NER3 117 aa16.1■□□□□ 0.17
HMGA2-206ENST00000536545 GAGE1Q13065 139 aa16.1■□□□□ 0.17
HMGA2-206ENST00000536545 GAGE4Q13068 117 aa16.1■□□□□ 0.17
HMGA2-206ENST00000536545 GAGE5Q13069 117 aa16.1■□□□□ 0.17
HMGA2-206ENST00000536545 GAGE13Q4V321 117 aa16.1■□□□□ 0.17
HMGA2-206ENST00000536545 HERVK_113P61574 105 aa16.09■□□□□ 0.17
HMGA2-206ENST00000536545 FHL2Q14192 279 aa16.09■□□□□ 0.17
HMGA2-206ENST00000536545 TRGV4A0A0C4DH28 118 aa16.08■□□□□ 0.16
HMGA2-206ENST00000536545 MYMXA0A1B0GTQ4 84 aa16.07■□□□□ 0.16
HMGA2-206ENST00000536545 SEC11AP67812 179 aa16.07■□□□□ 0.16
HMGA2-206ENST00000536545 DEFB135Q30KP9 77 aa16.07■□□□□ 0.16
HMGA2-206ENST00000536545 NTM-AS1Q6ZSK4 140 aa16.07■□□□□ 0.16
HMGA2-206ENST00000536545 Q6ZUT4 128 aa16.07■□□□□ 0.16
HMGA2-206ENST00000536545 TIMM21Q9BVV7 248 aa16.07■□□□□ 0.16
HMGA2-206ENST00000536545 ZNF25P17030 456 aaPredicted RBP16.06■□□□□ 0.16
HMGA2-206ENST00000536545 TMEM170BQ5T4T1 132 aa16.06■□□□□ 0.16
HMGA2-206ENST00000536545 A0A0J9YXV3 536 aa16.05■□□□□ 0.16
HMGA2-206ENST00000536545 LOC100131303A0A0U1RQF7 123 aa16.05■□□□□ 0.16
HMGA2-206ENST00000536545 ORAOV1Q8WV07 137 aa16.05■□□□□ 0.16
HMGA2-206ENST00000536545 LINC00694P0DN24 101 aa16.05■□□□□ 0.16
HMGA2-206ENST00000536545 ZNF22P17026 224 aaPredicted RBP16.05■□□□□ 0.16
HMGA2-206ENST00000536545 MRPS36P82909 103 aaKnown RBP16.05■□□□□ 0.16
HMGA2-206ENST00000536545 SBSPONQ8IVN8 264 aa16.05■□□□□ 0.16
HMGA2-206ENST00000536545 FBN1P35555 2871 aaKnown RBP16.04■□□□□ 0.16
HMGA2-206ENST00000536545 DEFB130BP0DP73 79 aa16.04■□□□□ 0.16
HMGA2-206ENST00000536545 DEFB130AP0DP74 79 aa16.04■□□□□ 0.16
HMGA2-206ENST00000536545 RNASE13Q5GAN3 156 aaKnown RBP16.04■□□□□ 0.16
HMGA2-206ENST00000536545 GTSF1LQ9H1H1 148 aa16.03■□□□□ 0.16
HMGA2-206ENST00000536545 TMEM223A0PJW6 202 aa16.03■□□□□ 0.16
HMGA2-206ENST00000536545 TAX1BP3O14907 124 aa16.03■□□□□ 0.16
HMGA2-206ENST00000536545 IGHV4-30-4P0DP06 118 aa16.03■□□□□ 0.16
HMGA2-206ENST00000536545 Q6ZVH6 145 aa16.03■□□□□ 0.16
HMGA2-206ENST00000536545 COX11Q9Y6N1 276 aa16.03■□□□□ 0.16
HMGA2-206ENST00000536545 TSPEAR-AS2P59090 65 aa16.02■□□□□ 0.15
HMGA2-206ENST00000536545 PRIMA1Q86XR5 153 aa16.02■□□□□ 0.15
HMGA2-206ENST00000536545 ZNF815PA8K554 130 aa16.01■□□□□ 0.15
HMGA2-206ENST00000536545 LYRM9A8MSI8 78 aa16.01■□□□□ 0.15
HMGA2-206ENST00000536545 C3orf56Q8N813 242 aa16.01■□□□□ 0.15
HMGA2-206ENST00000536545 SHISA2Q6UWI4 295 aa16■□□□□ 0.15
HMGA2-206ENST00000536545 NBEAL2Q6ZNJ1 2754 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms