RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ISOC2Q96AB3 205 aa9.37□□□□□ -0.91
UBE3B-206ENST00000536398 IGLV4-60A0A075B6I1 120 aa9.36□□□□□ -0.91
UBE3B-206ENST00000536398 PKIAP61925 76 aa9.36□□□□□ -0.91
UBE3B-206ENST00000536398 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
UBE3B-206ENST00000536398 TMEM243Q9BU79 118 aa9.36□□□□□ -0.91
UBE3B-206ENST00000536398 C1orf43Q9BWL3 253 aa9.36□□□□□ -0.91
UBE3B-206ENST00000536398 GFRA4Q9GZZ7 299 aa9.36□□□□□ -0.91
UBE3B-206ENST00000536398 PRR34Q9NV39 138 aa9.36□□□□□ -0.91
UBE3B-206ENST00000536398 SMR3BP02814 79 aaPredicted RBP9.35□□□□□ -0.91
UBE3B-206ENST00000536398 COTL1Q14019 142 aa9.35□□□□□ -0.91
UBE3B-206ENST00000536398 PEA15Q15121 130 aa9.35□□□□□ -0.91
UBE3B-206ENST00000536398 ADIRFQ15847 76 aa9.35□□□□□ -0.91
UBE3B-206ENST00000536398 FAM74A3Q4VXF1 159 aa9.35□□□□□ -0.91
UBE3B-206ENST00000536398 C20orf203Q8NBC4 194 aa9.35□□□□□ -0.91
UBE3B-206ENST00000536398 A0A1B0GUT8 65 aa9.34□□□□□ -0.91
UBE3B-206ENST00000536398 AMTP48728 403 aa9.34□□□□□ -0.91
UBE3B-206ENST00000536398 MIAQ16674 131 aa9.34□□□□□ -0.91
UBE3B-206ENST00000536398 KRTAP26-1Q6PEX3 210 aa9.34□□□□□ -0.91
UBE3B-206ENST00000536398 NUP35Q8NFH5 326 aa9.34□□□□□ -0.91
UBE3B-206ENST00000536398 FRZBQ92765 325 aa9.34□□□□□ -0.91
UBE3B-206ENST00000536398 BORCS7Q96B45 105 aa9.34□□□□□ -0.91
UBE3B-206ENST00000536398 RNF185Q96GF1 192 aa9.34□□□□□ -0.91
UBE3B-206ENST00000536398 NAT8Q9UHE5 227 aa9.34□□□□□ -0.91
UBE3B-206ENST00000536398 VPS13BQ7Z7G8 4022 aa9.33□□□□□ -0.92
UBE3B-206ENST00000536398 HLA-DQA1P01909 254 aa9.33□□□□□ -0.92
UBE3B-206ENST00000536398 TMEM70Q9BUB7 260 aa9.33□□□□□ -0.92
UBE3B-206ENST00000536398 IGLV10-54A0A075B6I4 117 aa9.32□□□□□ -0.92
UBE3B-206ENST00000536398 A0A1B0GUV1 79 aa9.32□□□□□ -0.92
UBE3B-206ENST00000536398 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
UBE3B-206ENST00000536398 RAB4AP20338 218 aa9.32□□□□□ -0.92
UBE3B-206ENST00000536398 RPS10P46783 165 aaKnown RBP9.32□□□□□ -0.92
UBE3B-206ENST00000536398 REG3AQ06141 175 aa9.32□□□□□ -0.92
UBE3B-206ENST00000536398 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
UBE3B-206ENST00000536398 TMEM191AQ9H0A3 160 aa9.32□□□□□ -0.92
UBE3B-206ENST00000536398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-206ENST00000536398 IGKV2-29A2NJV5 120 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-206ENST00000536398 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
UBE3B-206ENST00000536398 EPM2AB3EWF7 344 aa9.31□□□□□ -0.92
UBE3B-206ENST00000536398 USP17L23D6RBM5 183 aa9.31□□□□□ -0.92
UBE3B-206ENST00000536398 SMKR1H3BMG3 65 aa9.31□□□□□ -0.92
UBE3B-206ENST00000536398 UBE2L6O14933 153 aa9.31□□□□□ -0.92
UBE3B-206ENST00000536398 RIGQ13278 110 aa9.3□□□□□ -0.92
UBE3B-206ENST00000536398 SMDT1Q9H4I9 107 aa9.3□□□□□ -0.92
UBE3B-206ENST00000536398 NAT8BQ9UHF3 227 aa9.3□□□□□ -0.92
UBE3B-206ENST00000536398 TRBV6-5A0A0K0K1A5 114 aa9.29□□□□□ -0.92
UBE3B-206ENST00000536398 SMIM27A0A1W2PRY6 76 aa9.29□□□□□ -0.92
UBE3B-206ENST00000536398 NCR2O95944 276 aa9.29□□□□□ -0.92
UBE3B-206ENST00000536398 PRSS1P07477 247 aa9.29□□□□□ -0.92
UBE3B-206ENST00000536398 PMCHP20382 165 aa9.29□□□□□ -0.92
UBE3B-206ENST00000536398 Q5VSD8 79 aa9.29□□□□□ -0.92
UBE3B-206ENST00000536398 Q6ZSA8 131 aa9.29□□□□□ -0.92
UBE3B-206ENST00000536398 ST20Q9HBF5 79 aa9.29□□□□□ -0.92
UBE3B-206ENST00000536398 I3L3M4 83 aa9.28□□□□□ -0.92
UBE3B-206ENST00000536398 TSHBP01222 138 aa9.28□□□□□ -0.92
UBE3B-206ENST00000536398 APCSP02743 223 aa9.28□□□□□ -0.92
UBE3B-206ENST00000536398 IGKV3OR2-268A0A0C4DH90 116 aa9.27□□□□□ -0.93
UBE3B-206ENST00000536398 CAMPP49913 170 aa9.27□□□□□ -0.93
UBE3B-206ENST00000536398 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
UBE3B-206ENST00000536398 MRAP2Q96G30 205 aa9.27□□□□□ -0.93
UBE3B-206ENST00000536398 TMEM242Q9NWH2 141 aa9.27□□□□□ -0.93
UBE3B-206ENST00000536398 FGF6P10767 208 aa9.26□□□□□ -0.93
UBE3B-206ENST00000536398 C14orf177Q52M58 125 aa9.26□□□□□ -0.93
UBE3B-206ENST00000536398 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
UBE3B-206ENST00000536398 RNASEKQ6P5S7 137 aaKnown RBP9.26□□□□□ -0.93
UBE3B-206ENST00000536398 NRACQ8N912 160 aa9.26□□□□□ -0.93
UBE3B-206ENST00000536398 TRAV8-4A0A0B4J246 113 aa9.25□□□□□ -0.93
UBE3B-206ENST00000536398 ESDP10768 282 aa9.25□□□□□ -0.93
UBE3B-206ENST00000536398 MRPL51Q4U2R6 128 aaKnown RBP9.25□□□□□ -0.93
UBE3B-206ENST00000536398 FAM104BQ5XKR9 115 aa9.25□□□□□ -0.93
UBE3B-206ENST00000536398 TRBV27A0A0K0K1C4 114 aa9.24□□□□□ -0.93
UBE3B-206ENST00000536398 GAGE12HA6NDE8 117 aa9.24□□□□□ -0.93
UBE3B-206ENST00000536398 MRPL54Q6P161 138 aaKnown RBP9.24□□□□□ -0.93
UBE3B-206ENST00000536398 H7C423 109 aa9.23□□□□□ -0.93
UBE3B-206ENST00000536398 INAFM2P0DMQ5 153 aa9.23□□□□□ -0.93
UBE3B-206ENST00000536398 RAB14P61106 215 aa9.23□□□□□ -0.93
UBE3B-206ENST00000536398 SCXQ7RTU7 201 aa9.23□□□□□ -0.93
UBE3B-206ENST00000536398 FAM229AH3BQW9 127 aa9.22□□□□□ -0.93
UBE3B-206ENST00000536398 SLPIP03973 132 aa9.22□□□□□ -0.93
UBE3B-206ENST00000536398 CHCHD10Q8WYQ3 142 aaPredicted RBP9.22□□□□□ -0.93
UBE3B-206ENST00000536398 A0A1B0GXF2 115 aa9.21□□□□□ -0.94
UBE3B-206ENST00000536398 hDV102S1A0JD36 115 aa9.21□□□□□ -0.94
UBE3B-206ENST00000536398 VCYO14598 125 aa9.21□□□□□ -0.94
UBE3B-206ENST00000536398 SUMO2P61956 95 aaKnown RBP9.21□□□□□ -0.94
UBE3B-206ENST00000536398 IFITM2Q01629 132 aa9.21□□□□□ -0.94
UBE3B-206ENST00000536398 DGAT2L7PQ6IED9 249 aa9.21□□□□□ -0.94
UBE3B-206ENST00000536398 CLRN3Q8NCR9 226 aa9.21□□□□□ -0.94
UBE3B-206ENST00000536398 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.94
UBE3B-206ENST00000536398 CHAC1Q9BUX1 264 aa9.21□□□□□ -0.94
UBE3B-206ENST00000536398 CLLU1Q5K131 121 aa9.2□□□□□ -0.94
UBE3B-206ENST00000536398 C15orf56Q8N910 161 aa9.2□□□□□ -0.94
UBE3B-206ENST00000536398 C9orf163Q8N9P6 203 aa9.2□□□□□ -0.94
UBE3B-206ENST00000536398 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
UBE3B-206ENST00000536398 A0A1B0GW15 77 aa9.19□□□□□ -0.94
UBE3B-206ENST00000536398 PANO1I0J062 215 aa9.19□□□□□ -0.94
UBE3B-206ENST00000536398 ZNF25P17030 456 aaPredicted RBP9.19□□□□□ -0.94
UBE3B-206ENST00000536398 CKS2P33552 79 aa9.19□□□□□ -0.94
UBE3B-206ENST00000536398 HBBP68871 147 aa9.19□□□□□ -0.94
UBE3B-206ENST00000536398 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
UBE3B-206ENST00000536398 OR5A1Q8NGJ0 315 aa9.19□□□□□ -0.94
UBE3B-206ENST00000536398 TMEM101Q96IK0 257 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms