RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 A0A0J9YX75 114 aa13.29□□□□□ -0.28
RAB40C-203ENST00000535977 RNF223E7ERA6 249 aa13.29□□□□□ -0.28
RAB40C-203ENST00000535977 SPRY2O43597 315 aa13.29□□□□□ -0.28
RAB40C-203ENST00000535977 TSHBP01222 138 aa13.29□□□□□ -0.28
RAB40C-203ENST00000535977 LINC00315P59091 139 aa13.28□□□□□ -0.28
RAB40C-203ENST00000535977 C2orf82Q6UX34 121 aa13.28□□□□□ -0.28
RAB40C-203ENST00000535977 A0A0B4J2C4 111 aa13.28□□□□□ -0.28
RAB40C-203ENST00000535977 TMEM170BQ5T4T1 132 aa13.28□□□□□ -0.28
RAB40C-203ENST00000535977 Q6YL49 198 aa13.28□□□□□ -0.28
RAB40C-203ENST00000535977 UBE2E2Q96LR5 201 aa13.28□□□□□ -0.28
RAB40C-203ENST00000535977 MAP1AP78559 2803 aaPredicted RBP13.28□□□□□ -0.28
RAB40C-203ENST00000535977 TRBV7-7A0A0K0K1E9 115 aa13.27□□□□□ -0.29
RAB40C-203ENST00000535977 VCYO14598 125 aa13.27□□□□□ -0.29
RAB40C-203ENST00000535977 FSHBP01225 129 aa13.27□□□□□ -0.29
RAB40C-203ENST00000535977 RNF152Q8N8N0 203 aa13.27□□□□□ -0.29
RAB40C-203ENST00000535977 DUX3Q96PT4 197 aa13.27□□□□□ -0.29
RAB40C-203ENST00000535977 ABCA12Q86UK0 2595 aa13.27□□□□□ -0.29
RAB40C-203ENST00000535977 TRAV12-3A0A0B4J271 114 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 J3QQQ9 107 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 M0R2P5 195 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 EDN2P20800 178 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 PAPPA-AS1Q5QFB9 102 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 MUSTN1Q8IVN3 82 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 C9orf85Q96MD7 179 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 SVEP1Q4LDE5 3571 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 FAM236AA0A1B0GUQ0 79 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 FAM236BA0A1B0GV22 79 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 TRIAP1O43715 76 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 DEFB104AQ8WTQ1 72 aa13.26□□□□□ -0.29
RAB40C-203ENST00000535977 LGALS3P17931 250 aaKnown RBP13.25□□□□□ -0.29
RAB40C-203ENST00000535977 POLR2KP53803 58 aaKnown RBP13.25□□□□□ -0.29
RAB40C-203ENST00000535977 IGHV3-16A0A0C4DH30 117 aa13.25□□□□□ -0.29
RAB40C-203ENST00000535977 TRBV6-5A0A0K0K1A5 114 aa13.25□□□□□ -0.29
RAB40C-203ENST00000535977 H7C423 109 aa13.25□□□□□ -0.29
RAB40C-203ENST00000535977 C9orf153Q5TBE3 101 aa13.25□□□□□ -0.29
RAB40C-203ENST00000535977 ZNRF2Q8NHG8 242 aa13.25□□□□□ -0.29
RAB40C-203ENST00000535977 POLQO75417 2590 aa13.24□□□□□ -0.29
RAB40C-203ENST00000535977 C10orf99Q6UWK7 81 aa13.24□□□□□ -0.29
RAB40C-203ENST00000535977 TRGV11A0A075B6L2 103 aa13.24□□□□□ -0.29
RAB40C-203ENST00000535977 SYNJ2BPP57105 145 aa13.24□□□□□ -0.29
RAB40C-203ENST00000535977 PMVKQ15126 192 aa13.24□□□□□ -0.29
RAB40C-203ENST00000535977 SUMO4Q6EEV6 95 aa13.24□□□□□ -0.29
RAB40C-203ENST00000535977 TP53TG1Q9Y2A0 90 aa13.24□□□□□ -0.29
RAB40C-203ENST00000535977 NDUFA7O95182 113 aa13.23□□□□□ -0.29
RAB40C-203ENST00000535977 CEMP1Q6PRD7 247 aaPredicted RBP13.23□□□□□ -0.29
RAB40C-203ENST00000535977 TMEM141Q96I45 108 aa13.23□□□□□ -0.29
RAB40C-203ENST00000535977 ZNF702PQ9H963 129 aa13.23□□□□□ -0.29
RAB40C-203ENST00000535977 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
RAB40C-203ENST00000535977 SMIM9A6NGZ8 99 aa13.23□□□□□ -0.29
RAB40C-203ENST00000535977 TMEM101Q96IK0 257 aa13.23□□□□□ -0.29
RAB40C-203ENST00000535977 IGHV1OR15-1A0A075B7D0 117 aa13.22□□□□□ -0.29
RAB40C-203ENST00000535977 FAM240AA0A1B0GVK7 77 aa13.22□□□□□ -0.29
RAB40C-203ENST00000535977 IGHV4-31P0DP07 118 aa13.22□□□□□ -0.29
RAB40C-203ENST00000535977 HIST2H2BCQ6DN03 193 aa13.22□□□□□ -0.29
RAB40C-203ENST00000535977 NOTCH2Q04721 2471 aa13.22□□□□□ -0.29
RAB40C-203ENST00000535977 MUC4Q99102 2169 aa13.22□□□□□ -0.29
RAB40C-203ENST00000535977 TRBV30A0A0K0K1B3 111 aa13.22□□□□□ -0.29
RAB40C-203ENST00000535977 IGIPA6NJ69 53 aa13.22□□□□□ -0.29
RAB40C-203ENST00000535977 F5H697 171 aa13.22□□□□□ -0.29
RAB40C-203ENST00000535977 ZNF22P17026 224 aaPredicted RBP13.22□□□□□ -0.29
RAB40C-203ENST00000535977 HOXD3P31249 432 aaPredicted RBP13.21□□□□□ -0.29
RAB40C-203ENST00000535977 C3orf22Q8N5N4 141 aa13.21□□□□□ -0.29
RAB40C-203ENST00000535977 KLK5Q9Y337 293 aaPredicted RBP13.21□□□□□ -0.29
RAB40C-203ENST00000535977 TRBV27A0A0K0K1C4 114 aa13.21□□□□□ -0.29
RAB40C-203ENST00000535977 HERVK_113P63121 156 aa13.21□□□□□ -0.29
RAB40C-203ENST00000535977 LRRC75A-AS1Q8N1F1 130 aa13.21□□□□□ -0.29
RAB40C-203ENST00000535977 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.2□□□□□ -0.3
RAB40C-203ENST00000535977 RPL39P62891 51 aaKnown RBP13.2□□□□□ -0.3
RAB40C-203ENST00000535977 TIMM17AQ99595 171 aa13.2□□□□□ -0.3
RAB40C-203ENST00000535977 FAM19A5Q7Z5A7 132 aaPredicted RBP13.19□□□□□ -0.3
RAB40C-203ENST00000535977 CSPG4Q6UVK1 2322 aa13.19□□□□□ -0.3
RAB40C-203ENST00000535977 A0A087WWL8 130 aa13.19□□□□□ -0.3
RAB40C-203ENST00000535977 H3BT86 120 aa13.19□□□□□ -0.3
RAB40C-203ENST00000535977 SPXQ9BT56 116 aa13.19□□□□□ -0.3
RAB40C-203ENST00000535977 JPT2Q9H910 190 aa13.19□□□□□ -0.3
RAB40C-203ENST00000535977 SDHAF1A6NFY7 115 aa13.19□□□□□ -0.3
RAB40C-203ENST00000535977 Q8N2B8 174 aa13.19□□□□□ -0.3
RAB40C-203ENST00000535977 FBN2P35556 2912 aa13.18□□□□□ -0.3
RAB40C-203ENST00000535977 DEFB121Q5J5C9 76 aa13.18□□□□□ -0.3
RAB40C-203ENST00000535977 RHOHQ15669 191 aa13.18□□□□□ -0.3
RAB40C-203ENST00000535977 IGHV3-64A0A075B6Q5 118 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 TRAV12-2A0A075B6T6 113 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 J3KT08 172 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 IGKV3-20P01619 116 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 SPINK13Q1W4C9 94 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 MAPK1IP1LQ8NDC0 245 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 ITPR2Q14571 2701 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 TMEM223A0PJW6 202 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 ZNF876PQ49A33 203 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 ICOSQ9Y6W8 199 aa13.17□□□□□ -0.3
RAB40C-203ENST00000535977 DEFB113Q30KQ7 82 aa13.16□□□□□ -0.3
RAB40C-203ENST00000535977 CLEC2BQ92478 149 aa13.16□□□□□ -0.3
RAB40C-203ENST00000535977 ZNF256Q9Y2P7 627 aaPredicted RBP13.16□□□□□ -0.3
RAB40C-203ENST00000535977 M0QY20 66 aa13.16□□□□□ -0.3
RAB40C-203ENST00000535977 UQCRQO14949 82 aa13.16□□□□□ -0.3
RAB40C-203ENST00000535977 LEPROTO15243 131 aa13.16□□□□□ -0.3
RAB40C-203ENST00000535977 VPS13CQ709C8 3753 aa13.16□□□□□ -0.3
RAB40C-203ENST00000535977 PEMTQ9UBM1 199 aa13.15□□□□□ -0.3
RAB40C-203ENST00000535977 A8MTW9 85 aa13.15□□□□□ -0.3
RAB40C-203ENST00000535977 FAM74A4Q5TZK3 123 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms