RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 K7EP13 123 aa11.21□□□□□ -0.61
VAMP1-205ENST00000535927 FCER1GP30273 86 aa11.21□□□□□ -0.61
VAMP1-205ENST00000535927 ESRGQ1W209 222 aa11.21□□□□□ -0.61
VAMP1-205ENST00000535927 ORMDL2Q53FV1 153 aa11.21□□□□□ -0.61
VAMP1-205ENST00000535927 C18orf32Q8TCD1 76 aa11.21□□□□□ -0.61
VAMP1-205ENST00000535927 UPK3BQ9BT76 320 aa11.21□□□□□ -0.61
VAMP1-205ENST00000535927 MRPS16Q9Y3D3 137 aaKnown RBP11.21□□□□□ -0.61
VAMP1-205ENST00000535927 IGLV2-18A0A075B6J9 118 aa11.2□□□□□ -0.62
VAMP1-205ENST00000535927 LGALS9CQ6DKI2 356 aa11.2□□□□□ -0.62
VAMP1-205ENST00000535927 CHCHD7Q9BUK0 85 aa11.2□□□□□ -0.62
VAMP1-205ENST00000535927 LINC00614P0C842 121 aa11.19□□□□□ -0.62
VAMP1-205ENST00000535927 SACSQ9NZJ4 4579 aa11.18□□□□□ -0.62
VAMP1-205ENST00000535927 LOC389332A0A1B0GUA5 103 aa11.18□□□□□ -0.62
VAMP1-205ENST00000535927 TSHBP01222 138 aa11.18□□□□□ -0.62
VAMP1-205ENST00000535927 AMTP48728 403 aa11.18□□□□□ -0.62
VAMP1-205ENST00000535927 LAGE3Q14657 143 aa11.18□□□□□ -0.62
VAMP1-205ENST00000535927 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
VAMP1-205ENST00000535927 CHCHD1Q96BP2 118 aaKnown RBP11.18□□□□□ -0.62
VAMP1-205ENST00000535927 TMEM243Q9BU79 118 aa11.18□□□□□ -0.62
VAMP1-205ENST00000535927 IGHV3-38A0A0C4DH36 116 aa11.17□□□□□ -0.62
VAMP1-205ENST00000535927 ESDP10768 282 aa11.17□□□□□ -0.62
VAMP1-205ENST00000535927 IFI27P40305 119 aaPredicted RBP11.17□□□□□ -0.62
VAMP1-205ENST00000535927 AP5S1Q9NUS5 200 aa11.17□□□□□ -0.62
VAMP1-205ENST00000535927 DNAH7Q8WXX0 4024 aa11.17□□□□□ -0.62
VAMP1-205ENST00000535927 NTM-AS1Q6ZSK4 140 aa11.16□□□□□ -0.62
VAMP1-205ENST00000535927 NIT1Q86X76 327 aa11.16□□□□□ -0.62
VAMP1-205ENST00000535927 BAGE3Q86Y29 109 aa11.16□□□□□ -0.62
VAMP1-205ENST00000535927 UBE2DNLQ8IWF7 75 aa11.16□□□□□ -0.62
VAMP1-205ENST00000535927 LINC00588Q9Y4M8 146 aa11.16□□□□□ -0.62
VAMP1-205ENST00000535927 A0A1B0GUV1 79 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 UBE2L6O14933 153 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST1H2BKO60814 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST1H2BJP06899 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 NPSP0C0P6 89 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 ZNF25P17030 456 aaPredicted RBP11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST1H2BOP23527 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST1H2BBP33778 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST1H2BDP58876 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST1H2BCP62807 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST2H2BEQ16778 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.15□□□□□ -0.62
VAMP1-205ENST00000535927 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST1H2BHQ93079 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST1H2BNQ99877 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 HIST1H2BMQ99879 126 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 TIMM21Q9BVV7 248 aa11.15□□□□□ -0.62
VAMP1-205ENST00000535927 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.62
VAMP1-205ENST00000535927 TRAV9-2A0A087WT02 112 aa11.14□□□□□ -0.63
VAMP1-205ENST00000535927 CHCHD5Q9BSY4 110 aa11.14□□□□□ -0.63
VAMP1-205ENST00000535927 SIVA1O15304 175 aa11.13□□□□□ -0.63
VAMP1-205ENST00000535927 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
VAMP1-205ENST00000535927 MRPL52Q86TS9 123 aaKnown RBP11.13□□□□□ -0.63
VAMP1-205ENST00000535927 DNAH10OSP0CZ25 163 aa11.12□□□□□ -0.63
VAMP1-205ENST00000535927 LINC01556Q5JQF7 62 aa11.12□□□□□ -0.63
VAMP1-205ENST00000535927 C10orf126Q8N4M7 172 aa11.12□□□□□ -0.63
VAMP1-205ENST00000535927 Q9H8V8 135 aa11.12□□□□□ -0.63
VAMP1-205ENST00000535927 CYSLTR1Q9Y271 337 aa11.12□□□□□ -0.63
VAMP1-205ENST00000535927 PYGO1Q9Y3Y4 419 aa11.12□□□□□ -0.63
VAMP1-205ENST00000535927 DNAH1Q9P2D7 4330 aa11.12□□□□□ -0.63
VAMP1-205ENST00000535927 A0A087WX48 190 aa11.11□□□□□ -0.63
VAMP1-205ENST00000535927 BTF3P20290 206 aaKnown RBP11.11□□□□□ -0.63
VAMP1-205ENST00000535927 SPANXA1Q9NS26 97 aa11.11□□□□□ -0.63
VAMP1-205ENST00000535927 LCE6AA0A183 80 aa11.1□□□□□ -0.63
VAMP1-205ENST00000535927 TMEM262E9PQX1 116 aa11.1□□□□□ -0.63
VAMP1-205ENST00000535927 HSBP1O75506 76 aa11.1□□□□□ -0.63
VAMP1-205ENST00000535927 PAPPA-AS1Q5QFB9 102 aa11.1□□□□□ -0.63
VAMP1-205ENST00000535927 AMMECR1LQ6DCA0 310 aa11.1□□□□□ -0.63
VAMP1-205ENST00000535927 RNASEKQ6P5S7 137 aaKnown RBP11.1□□□□□ -0.63
VAMP1-205ENST00000535927 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
VAMP1-205ENST00000535927 TTC32Q5I0X7 151 aa11.09□□□□□ -0.63
VAMP1-205ENST00000535927 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
VAMP1-205ENST00000535927 TMA7Q9Y2S6 64 aaKnown RBP11.09□□□□□ -0.63
VAMP1-205ENST00000535927 CSMD3Q7Z407 3707 aa11.08□□□□□ -0.64
VAMP1-205ENST00000535927 HBDP02042 147 aa11.08□□□□□ -0.64
VAMP1-205ENST00000535927 DGAT2L7PQ6IED9 249 aa11.08□□□□□ -0.64
VAMP1-205ENST00000535927 C2orf66Q6UXQ4 117 aa11.08□□□□□ -0.64
VAMP1-205ENST00000535927 LINC00476Q8WZB0 136 aa11.08□□□□□ -0.64
VAMP1-205ENST00000535927 URB1-AS1Q96HZ7 61 aa11.08□□□□□ -0.64
VAMP1-205ENST00000535927 FGF6P10767 208 aa11.07□□□□□ -0.64
VAMP1-205ENST00000535927 MRPS36P82909 103 aaKnown RBP11.07□□□□□ -0.64
VAMP1-205ENST00000535927 TMEM141Q96I45 108 aa11.07□□□□□ -0.64
VAMP1-205ENST00000535927 PACRGQ96M98 296 aaPredicted RBP11.07□□□□□ -0.64
VAMP1-205ENST00000535927 TIMM17AQ99595 171 aa11.07□□□□□ -0.64
VAMP1-205ENST00000535927 CCL25O15444 150 aa11.06□□□□□ -0.64
VAMP1-205ENST00000535927 SERF1AO75920 110 aa11.06□□□□□ -0.64
VAMP1-205ENST00000535927 S100A6P06703 90 aa11.06□□□□□ -0.64
VAMP1-205ENST00000535927 GAGE6Q13070 117 aa11.06□□□□□ -0.64
VAMP1-205ENST00000535927 ERASQ7Z444 233 aa11.06□□□□□ -0.64
VAMP1-205ENST00000535927 WFDC10BQ8IUB3 73 aa11.06□□□□□ -0.64
VAMP1-205ENST00000535927 OR5A1Q8NGJ0 315 aa11.06□□□□□ -0.64
VAMP1-205ENST00000535927 LYSTQ99698 3801 aa11.06□□□□□ -0.64
VAMP1-205ENST00000535927 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
VAMP1-205ENST00000535927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
VAMP1-205ENST00000535927 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
VAMP1-205ENST00000535927 ATP5LO75964 103 aa11.05□□□□□ -0.64
VAMP1-205ENST00000535927 RBX1P62877 108 aa11.05□□□□□ -0.64
VAMP1-205ENST00000535927 NDUFA6P56556 154 aa11.04□□□□□ -0.64
VAMP1-205ENST00000535927 IGIPA6NJ69 53 aa11.03□□□□□ -0.64
VAMP1-205ENST00000535927 LY6G6CO95867 125 aa11.03□□□□□ -0.64
VAMP1-205ENST00000535927 MPV17L2Q567V2 206 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms