RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 RIPPLY3P57055 190 aa13.18□□□□□ -0.3
HTATSF1-204ENST00000535601 ANK2Q01484 3957 aa13.17□□□□□ -0.3
HTATSF1-204ENST00000535601 UFSP1Q6NVU6 142 aa13.17□□□□□ -0.3
HTATSF1-204ENST00000535601 NEXN-AS1Q8NBZ9 246 aa13.17□□□□□ -0.3
HTATSF1-204ENST00000535601 RAB37Q96AX2 223 aa13.17□□□□□ -0.3
HTATSF1-204ENST00000535601 GAGE10A6NGK3 116 aa13.17□□□□□ -0.3
HTATSF1-204ENST00000535601 CYSRT1A8MQ03 144 aa13.15□□□□□ -0.3
HTATSF1-204ENST00000535601 K7EMI3 77 aa13.15□□□□□ -0.3
HTATSF1-204ENST00000535601 TRBV6-5A0A0K0K1A5 114 aa13.15□□□□□ -0.3
HTATSF1-204ENST00000535601 A8MWV9 139 aa13.15□□□□□ -0.3
HTATSF1-204ENST00000535601 H3BUT2 72 aa13.15□□□□□ -0.3
HTATSF1-204ENST00000535601 IGIPA6NJ69 53 aa13.14□□□□□ -0.31
HTATSF1-204ENST00000535601 MAPKAPK5-AS1Q8N8E1 139 aa13.14□□□□□ -0.31
HTATSF1-204ENST00000535601 TNFRSF18Q9Y5U5 241 aa13.14□□□□□ -0.31
HTATSF1-204ENST00000535601 F8VRH5 84 aa13.14□□□□□ -0.31
HTATSF1-204ENST00000535601 SHISA2Q6UWI4 295 aa13.14□□□□□ -0.31
HTATSF1-204ENST00000535601 H7C1H1 209 aa13.13□□□□□ -0.31
HTATSF1-204ENST00000535601 GAGE7O76087 117 aa13.13□□□□□ -0.31
HTATSF1-204ENST00000535601 GAGE12FP0CL80 117 aa13.13□□□□□ -0.31
HTATSF1-204ENST00000535601 GAGE12GP0CL81 117 aa13.13□□□□□ -0.31
HTATSF1-204ENST00000535601 GAGE12IP0CL82 117 aa13.13□□□□□ -0.31
HTATSF1-204ENST00000535601 BOD1L2Q8IYS8 172 aa13.13□□□□□ -0.31
HTATSF1-204ENST00000535601 I3L3M4 83 aa13.13□□□□□ -0.31
HTATSF1-204ENST00000535601 SEC11AP67812 179 aa13.12□□□□□ -0.31
HTATSF1-204ENST00000535601 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.12□□□□□ -0.31
HTATSF1-204ENST00000535601 IGKV2-29A2NJV5 120 aaPredicted RBP13.12□□□□□ -0.31
HTATSF1-204ENST00000535601 K7ERU9 68 aa13.12□□□□□ -0.31
HTATSF1-204ENST00000535601 C11orf86A6NJI1 115 aa13.11□□□□□ -0.31
HTATSF1-204ENST00000535601 PLAC8L1A1L4L8 177 aa13.1□□□□□ -0.31
HTATSF1-204ENST00000535601 A6NDN8 102 aa13.1□□□□□ -0.31
HTATSF1-204ENST00000535601 CSNK1G2-AS1Q8NCQ2 148 aa13.1□□□□□ -0.31
HTATSF1-204ENST00000535601 SPXQ9BT56 116 aa13.1□□□□□ -0.31
HTATSF1-204ENST00000535601 RPL32P62910 135 aaKnown RBP13.1□□□□□ -0.31
HTATSF1-204ENST00000535601 ZNRF2Q8NHG8 242 aa13.1□□□□□ -0.31
HTATSF1-204ENST00000535601 TMEM263Q8WUH6 116 aaKnown RBP13.1□□□□□ -0.31
HTATSF1-204ENST00000535601 IGLV4-69A0A075B6H9 119 aa13.09□□□□□ -0.31
HTATSF1-204ENST00000535601 DEFB4AO15263 64 aa13.09□□□□□ -0.31
HTATSF1-204ENST00000535601 C20orf203Q8NBC4 194 aa13.09□□□□□ -0.31
HTATSF1-204ENST00000535601 CMYA5Q8N3K9 4069 aa13.09□□□□□ -0.31
HTATSF1-204ENST00000535601 LOC100131303A0A0U1RQF7 123 aa13.09□□□□□ -0.31
HTATSF1-204ENST00000535601 RS1O15537 224 aa13.09□□□□□ -0.31
HTATSF1-204ENST00000535601 IGHV3-64A0A075B6Q5 118 aa13.08□□□□□ -0.32
HTATSF1-204ENST00000535601 TRAV12-1A0A0B4J245 112 aa13.08□□□□□ -0.32
HTATSF1-204ENST00000535601 GTF2H5Q6ZYL4 71 aa13.08□□□□□ -0.32
HTATSF1-204ENST00000535601 C9orf118A6NHY6 69 aa13.08□□□□□ -0.32
HTATSF1-204ENST00000535601 PLNP26678 52 aa13.08□□□□□ -0.32
HTATSF1-204ENST00000535601 IL17DQ8TAD2 202 aa13.08□□□□□ -0.32
HTATSF1-204ENST00000535601 TRGV2A0A075B6R0 118 aa13.07□□□□□ -0.32
HTATSF1-204ENST00000535601 LINC00467Q9BRT7 94 aa13.07□□□□□ -0.32
HTATSF1-204ENST00000535601 RRN3P1Q2M238 152 aa13.07□□□□□ -0.32
HTATSF1-204ENST00000535601 PMVKQ15126 192 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 CITED1Q99966 193 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 GAGE12JA6NER3 117 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 H3BRM9 83 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 DEFB130BP0DP73 79 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 DEFB130AP0DP74 79 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 GAGE4Q13068 117 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 GAGE5Q13069 117 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 GAGE13Q4V321 117 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 SLC25A29Q8N8R3 303 aa13.06□□□□□ -0.32
HTATSF1-204ENST00000535601 TRBV25-1A0A075B6N4 114 aa13.05□□□□□ -0.32
HTATSF1-204ENST00000535601 HSD52Q0P140 79 aa13.05□□□□□ -0.32
HTATSF1-204ENST00000535601 FAM104AQ969W3 186 aa13.05□□□□□ -0.32
HTATSF1-204ENST00000535601 GCSHP23434 173 aa13.05□□□□□ -0.32
HTATSF1-204ENST00000535601 NBEAL1Q6ZS30 2694 aa13.04□□□□□ -0.32
HTATSF1-204ENST00000535601 PRADC1Q9BSG0 188 aa13.04□□□□□ -0.32
HTATSF1-204ENST00000535601 IGLV4-3A0A075B6K6 122 aa13.04□□□□□ -0.32
HTATSF1-204ENST00000535601 A0A0J9YXV3 536 aa13.04□□□□□ -0.32
HTATSF1-204ENST00000535601 RHOHQ15669 191 aa13.04□□□□□ -0.32
HTATSF1-204ENST00000535601 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
HTATSF1-204ENST00000535601 TENM3Q9P273 2699 aa13.04□□□□□ -0.32
HTATSF1-204ENST00000535601 RHODO00212 210 aa13.03□□□□□ -0.32
HTATSF1-204ENST00000535601 TIMM17AQ99595 171 aa13.03□□□□□ -0.32
HTATSF1-204ENST00000535601 DEFB135Q30KP9 77 aa13.03□□□□□ -0.32
HTATSF1-204ENST00000535601 SPCS1Q9Y6A9 102 aa13.03□□□□□ -0.32
HTATSF1-204ENST00000535601 K7EP34 96 aa13.02□□□□□ -0.32
HTATSF1-204ENST00000535601 CMC4P56277 68 aaPredicted RBP13.02□□□□□ -0.33
HTATSF1-204ENST00000535601 CHAC1Q9BUX1 264 aa13.02□□□□□ -0.33
HTATSF1-204ENST00000535601 C16orf74Q96GX8 76 aa13.02□□□□□ -0.33
HTATSF1-204ENST00000535601 TSPEAR-AS2P59090 65 aa13.01□□□□□ -0.33
HTATSF1-204ENST00000535601 C9orf66Q5T8R8 295 aa13.01□□□□□ -0.33
HTATSF1-204ENST00000535601 OR11H2Q8NH07 326 aa13.01□□□□□ -0.33
HTATSF1-204ENST00000535601 TMEM141Q96I45 108 aa13.01□□□□□ -0.33
HTATSF1-204ENST00000535601 FAM110AQ9BQ89 295 aa13.01□□□□□ -0.33
HTATSF1-204ENST00000535601 LINC00694P0DN24 101 aa13.01□□□□□ -0.33
HTATSF1-204ENST00000535601 C1QTNF4Q9BXJ3 329 aa13.01□□□□□ -0.33
HTATSF1-204ENST00000535601 K7ERJ3 54 aa13□□□□□ -0.33
HTATSF1-204ENST00000535601 PLEKHB2Q96CS7 222 aa13□□□□□ -0.33
HTATSF1-204ENST00000535601 VCX2Q9H322 139 aa13□□□□□ -0.33
HTATSF1-204ENST00000535601 K7EQD1 137 aa13□□□□□ -0.33
HTATSF1-204ENST00000535601 FXYD2P54710 66 aa13□□□□□ -0.33
HTATSF1-204ENST00000535601 Q6ZUT4 128 aa13□□□□□ -0.33
HTATSF1-204ENST00000535601 A0A1W2PPM0 123 aa12.99□□□□□ -0.33
HTATSF1-204ENST00000535601 KRTAP24-1Q3LI83 254 aa12.99□□□□□ -0.33
HTATSF1-204ENST00000535601 OXLD1Q5BKU9 147 aa12.99□□□□□ -0.33
HTATSF1-204ENST00000535601 RPL24P83731 157 aaKnown RBP12.99□□□□□ -0.33
HTATSF1-204ENST00000535601 PIK3CD-AS1Q5SR53 167 aa12.99□□□□□ -0.33
HTATSF1-204ENST00000535601 PTH2Q96A98 100 aa12.99□□□□□ -0.33
HTATSF1-204ENST00000535601 TRBV7-3A0A075B6L6 115 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms