RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 PLA2G1BP04054 148 aaKnown RBP7.8□□□□□ -1.16
KNTC1-208ENST00000535410 AMTP48728 403 aa7.8□□□□□ -1.16
KNTC1-208ENST00000535410 DGAT2L7PQ6IED9 249 aa7.8□□□□□ -1.16
KNTC1-208ENST00000535410 CLRN3Q8NCR9 226 aa7.8□□□□□ -1.16
KNTC1-208ENST00000535410 SMIM7Q9BQ49 75 aa7.8□□□□□ -1.16
KNTC1-208ENST00000535410 FAM231BA6NCW3 169 aa7.79□□□□□ -1.16
KNTC1-208ENST00000535410 ZNF727A8MUV8 499 aa7.79□□□□□ -1.16
KNTC1-208ENST00000535410 NCR2O95944 276 aa7.79□□□□□ -1.16
KNTC1-208ENST00000535410 HLA-DQA1P01909 254 aa7.79□□□□□ -1.16
KNTC1-208ENST00000535410 FOXA3P55318 350 aaPredicted RBP7.79□□□□□ -1.16
KNTC1-208ENST00000535410 REG3AQ06141 175 aa7.79□□□□□ -1.16
KNTC1-208ENST00000535410 Q6ZSA8 131 aa7.79□□□□□ -1.16
KNTC1-208ENST00000535410 GFRA4Q9GZZ7 299 aa7.79□□□□□ -1.16
KNTC1-208ENST00000535410 USP17L23D6RBM5 183 aa7.78□□□□□ -1.16
KNTC1-208ENST00000535410 H7C423 109 aa7.78□□□□□ -1.16
KNTC1-208ENST00000535410 FAM74A3Q4VXF1 159 aa7.78□□□□□ -1.16
KNTC1-208ENST00000535410 GATD1Q8NB37 220 aa7.78□□□□□ -1.16
KNTC1-208ENST00000535410 GTSF1Q8WW33 167 aa7.78□□□□□ -1.16
KNTC1-208ENST00000535410 FAM30AQ9NZY2 134 aa7.78□□□□□ -1.16
KNTC1-208ENST00000535410 AMMECR1LQ6DCA0 310 aa7.77□□□□□ -1.17
KNTC1-208ENST00000535410 TSKUQ8WUA8 353 aa7.77□□□□□ -1.17
KNTC1-208ENST00000535410 OSTCQ9NRP0 149 aa7.77□□□□□ -1.17
KNTC1-208ENST00000535410 APOBP04114 4563 aaKnown RBP7.77□□□□□ -1.17
KNTC1-208ENST00000535410 A0A1B0GUT8 65 aa7.76□□□□□ -1.17
KNTC1-208ENST00000535410 PEA15Q15121 130 aa7.76□□□□□ -1.17
KNTC1-208ENST00000535410 TMEM241Q24JQ0 296 aa7.76□□□□□ -1.17
KNTC1-208ENST00000535410 CFAP161Q6P656 301 aa7.76□□□□□ -1.17
KNTC1-208ENST00000535410 CLPSL2Q6UWE3 100 aa7.76□□□□□ -1.17
KNTC1-208ENST00000535410 LINC01551Q86U37 167 aa7.76□□□□□ -1.17
KNTC1-208ENST00000535410 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
KNTC1-208ENST00000535410 SMDT1Q9H4I9 107 aa7.76□□□□□ -1.17
KNTC1-208ENST00000535410 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
KNTC1-208ENST00000535410 HIGD1CA8MV81 97 aa7.75□□□□□ -1.17
KNTC1-208ENST00000535410 I3L3M4 83 aa7.75□□□□□ -1.17
KNTC1-208ENST00000535410 PPP1R17O96001 155 aa7.75□□□□□ -1.17
KNTC1-208ENST00000535410 APCSP02743 223 aa7.75□□□□□ -1.17
KNTC1-208ENST00000535410 SRP19P09132 144 aaKnown RBP7.75□□□□□ -1.17
KNTC1-208ENST00000535410 PMCHP20382 165 aa7.75□□□□□ -1.17
KNTC1-208ENST00000535410 HAMPP81172 84 aa7.75□□□□□ -1.17
KNTC1-208ENST00000535410 RIGQ13278 110 aa7.75□□□□□ -1.17
KNTC1-208ENST00000535410 C20orf203Q8NBC4 194 aa7.75□□□□□ -1.17
KNTC1-208ENST00000535410 SRRM2Q9UQ35 2752 aaKnown RBP7.74□□□□□ -1.17
KNTC1-208ENST00000535410 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.74□□□□□ -1.17
KNTC1-208ENST00000535410 TRAV26-2A0A0B4J265 109 aa7.74□□□□□ -1.17
KNTC1-208ENST00000535410 SDHAF1A6NFY7 115 aa7.74□□□□□ -1.17
KNTC1-208ENST00000535410 TMEM101Q96IK0 257 aa7.74□□□□□ -1.17
KNTC1-208ENST00000535410 BTF3L4Q96K17 158 aa7.74□□□□□ -1.17
KNTC1-208ENST00000535410 TMEM191AQ9H0A3 160 aa7.74□□□□□ -1.17
KNTC1-208ENST00000535410 ST20Q9HBF5 79 aa7.74□□□□□ -1.17
KNTC1-208ENST00000535410 IGLV4-60A0A075B6I1 120 aa7.73□□□□□ -1.17
KNTC1-208ENST00000535410 IGLV10-54A0A075B6I4 117 aa7.73□□□□□ -1.17
KNTC1-208ENST00000535410 TRBV6-5A0A0K0K1A5 114 aa7.73□□□□□ -1.17
KNTC1-208ENST00000535410 PRSS1P07477 247 aa7.73□□□□□ -1.17
KNTC1-208ENST00000535410 ZNF25P17030 456 aaPredicted RBP7.73□□□□□ -1.17
KNTC1-208ENST00000535410 SMAGPQ0VAQ4 97 aa7.73□□□□□ -1.17
KNTC1-208ENST00000535410 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
KNTC1-208ENST00000535410 RNASEKQ6P5S7 137 aaKnown RBP7.73□□□□□ -1.17
KNTC1-208ENST00000535410 C9orf163Q8N9P6 203 aa7.73□□□□□ -1.17
KNTC1-208ENST00000535410 MRAP2Q96G30 205 aa7.73□□□□□ -1.17
KNTC1-208ENST00000535410 DMBT1Q9UGM3 2413 aaPredicted RBP7.72□□□□□ -1.17
KNTC1-208ENST00000535410 hDV102S1A0JD36 115 aa7.72□□□□□ -1.17
KNTC1-208ENST00000535410 KRTAP26-1Q6PEX3 210 aa7.72□□□□□ -1.17
KNTC1-208ENST00000535410 SCXQ7RTU7 201 aa7.72□□□□□ -1.17
KNTC1-208ENST00000535410 RPL39LQ96EH5 51 aaKnown RBP7.72□□□□□ -1.17
KNTC1-208ENST00000535410 NAT8BQ9UHF3 227 aa7.72□□□□□ -1.17
KNTC1-208ENST00000535410 A0A1B0GW15 77 aa7.71□□□□□ -1.18
KNTC1-208ENST00000535410 DEFB104AQ8WTQ1 72 aa7.71□□□□□ -1.18
KNTC1-208ENST00000535410 NAT8Q9UHE5 227 aa7.71□□□□□ -1.18
KNTC1-208ENST00000535410 A0A1B0GVG6 124 aa7.7□□□□□ -1.18
KNTC1-208ENST00000535410 VCYO14598 125 aa7.7□□□□□ -1.18
KNTC1-208ENST00000535410 S100A8P05109 93 aa7.7□□□□□ -1.18
KNTC1-208ENST00000535410 FGF6P10767 208 aa7.7□□□□□ -1.18
KNTC1-208ENST00000535410 RAB4AP20338 218 aa7.7□□□□□ -1.18
KNTC1-208ENST00000535410 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
KNTC1-208ENST00000535410 ADIRFQ15847 76 aa7.7□□□□□ -1.18
KNTC1-208ENST00000535410 CIRBP-AS1Q8TBR5 109 aa7.7□□□□□ -1.18
KNTC1-208ENST00000535410 ISOC2Q96AB3 205 aa7.7□□□□□ -1.18
KNTC1-208ENST00000535410 V9GYV3 84 aa7.7□□□□□ -1.18
KNTC1-208ENST00000535410 IGHV3-64A0A075B6Q5 118 aa7.69□□□□□ -1.18
KNTC1-208ENST00000535410 IGKV3OR2-268A0A0C4DH90 116 aa7.69□□□□□ -1.18
KNTC1-208ENST00000535410 PPP1R2P9O14990 202 aa7.69□□□□□ -1.18
KNTC1-208ENST00000535410 LORP23490 312 aaPredicted RBP7.69□□□□□ -1.18
KNTC1-208ENST00000535410 RPL23P62829 140 aaKnown RBP7.69□□□□□ -1.18
KNTC1-208ENST00000535410 NUP35Q8NFH5 326 aa7.69□□□□□ -1.18
KNTC1-208ENST00000535410 OR5A1Q8NGJ0 315 aa7.69□□□□□ -1.18
KNTC1-208ENST00000535410 DPH3Q96FX2 82 aa7.69□□□□□ -1.18
KNTC1-208ENST00000535410 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.68□□□□□ -1.18
KNTC1-208ENST00000535410 TRBV27A0A0K0K1C4 114 aa7.68□□□□□ -1.18
KNTC1-208ENST00000535410 IGKV2-29A2NJV5 120 aaPredicted RBP7.68□□□□□ -1.18
KNTC1-208ENST00000535410 LINC00862A6NCI5 91 aa7.68□□□□□ -1.18
KNTC1-208ENST00000535410 GAGE12HA6NDE8 117 aa7.68□□□□□ -1.18
KNTC1-208ENST00000535410 TCAPO15273 167 aa7.68□□□□□ -1.18
KNTC1-208ENST00000535410 FCER1GP30273 86 aa7.68□□□□□ -1.18
KNTC1-208ENST00000535410 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
KNTC1-208ENST00000535410 AMN1Q8IY45 258 aa7.68□□□□□ -1.18
KNTC1-208ENST00000535410 KIR2DL4Q99706 377 aa7.68□□□□□ -1.18
KNTC1-208ENST00000535410 ESDP10768 282 aa7.67□□□□□ -1.18
KNTC1-208ENST00000535410 POLR2KP53803 58 aaKnown RBP7.67□□□□□ -1.18
KNTC1-208ENST00000535410 SS18Q15532 418 aa7.67□□□□□ -1.18
KNTC1-208ENST00000535410 CHCHD10Q8WYQ3 142 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms