RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 PMVKQ15126 192 aa4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 RRN3P1Q2M238 152 aa4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 ZNRF2Q8NHG8 242 aa4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 PLEKHB2Q96CS7 222 aa4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 SPANXB1Q9NS25 103 aaPredicted RBP4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 BEX4Q9NWD9 120 aaPredicted RBP4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 TP53TG1Q9Y2A0 90 aa4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 SELENOKQ9Y6D0 94 aa4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 MYO18BQ8IUG5 2567 aa4.28□□□□□ -1.72
TNFRSF1A-206ENST00000535038 SORL1Q92673 2214 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 CELSR1Q9NYQ6 3014 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TRAV12-2A0A075B6T6 113 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 A0A0J9YY99 117 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 H3BMM0 161 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 K7ERU9 68 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TGFAP01135 160 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 CRYBA4P53673 196 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 RPL39P62891 51 aaKnown RBP4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 SPINK13Q1W4C9 94 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TCTEX1D4Q5JR98 221 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TRPT1Q86TN4 253 aaKnown RBP4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TMEM86BQ8N661 226 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 C20orf203Q8NBC4 194 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 RAB37Q96AX2 223 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 KIR2DL4Q99706 377 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 CREBBPQ92793 2442 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 COL12A1Q99715 3063 aa4.27□□□□□ -1.73
TNFRSF1A-206ENST00000535038 POLQO75417 2590 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 CELSR2Q9HCU4 2923 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 LRRK2Q5S007 2527 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ZNF462Q96JM2 2506 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ZANQ9Y493 2812 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TMEM223A0PJW6 202 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 DEFB113Q30KQ7 82 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 SLC25A29Q8N8R3 303 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 C11orf72Q8NBR9 251 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 C4orf3Q8WVX3 66 aa4.26□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ZFYVE26Q68DK2 2539 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 IGLV4-3A0A075B6K6 122 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ZNF815PA8K554 130 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 I3L3M4 83 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 IGKV3-20P01619 116 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 IGHV3-30P01768 117 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 IGHV3-30-5P0DP03 117 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 PCP4P48539 62 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 UBE2D3P61077 147 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 UBE2D2P62837 147 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ZNF843Q8N446 348 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 KLHL30-AS1Q8NEE0 82 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 HIST1H4GQ99525 98 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 FAM208BQ5VWN6 2430 aa4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 UTP20O75691 2785 aaKnown RBP4.25□□□□□ -1.73
TNFRSF1A-206ENST00000535038 MXRA5Q9NR99 2828 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 KNCNA6PVL3 124 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 F8W1H4 67 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 M0R2P5 195 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 LEPROTO15243 131 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 RS1O15537 224 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 DEFB131AP59861 70 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 HERVK_113P61574 105 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 RPL36AP83881 106 aaKnown RBP4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ZNF56Q15929 161 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 DEFB114Q30KQ6 69 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 SBSPONQ8IVN8 264 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TMEM61Q8N0U2 210 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 MAPK1IP1LQ8NDC0 245 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 LINC01600Q96MT4 127 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 DUX5Q96PT3 197 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 CHCHD7Q9BUK0 85 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 MAP6D1Q9H9H5 199 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 NAV2Q8IVL1 2488 aa4.24□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ZNF469Q96JG9 3925 aaPredicted RBP4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TRAV25A0A0B4J276 109 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TEX48A0A1B0GUV7 120 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 A8MWV9 139 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 J3QQQ9 107 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 RHODO00212 210 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 TSPAN13O95857 204 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 IGHV3-53P01767 116 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 PRB1P04280 392 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 MRPS36P82909 103 aaKnown RBP4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 DEFB136Q30KP8 78 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 CFAP126Q5VTH2 177 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 NDUFA11Q86Y39 141 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 LITAFQ99732 161 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 OPRPNQ99935 248 aaPredicted RBP4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 PEMTQ9UBM1 199 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 NBPF19A0A087WUL8 3843 aa4.23□□□□□ -1.73
TNFRSF1A-206ENST00000535038 MYO9AB2RTY4 2548 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 IGLV5-45A0A087WSX0 123 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 CFC1BP0CG36 223 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 CFC1P0CG37 223 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 EMP1P54849 157 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ZNF415Q09FC8 603 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 WFDC2Q14508 124 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 FAM74A4Q5TZK3 123 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms