RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 COTL1Q14019 142 aa15.16■□□□□ 0.02
YIF1A-213ENST00000534374 CT83Q5H943 113 aa15.16■□□□□ 0.02
YIF1A-213ENST00000534374 C20orf203Q8NBC4 194 aa15.16■□□□□ 0.02
YIF1A-213ENST00000534374 EIF5A2Q9GZV4 153 aaKnown RBP15.16■□□□□ 0.02
YIF1A-213ENST00000534374 TRAV8-4A0A0B4J246 113 aa15.15■□□□□ 0.02
YIF1A-213ENST00000534374 HLA-DQA1P01909 254 aa15.15■□□□□ 0.02
YIF1A-213ENST00000534374 DGAT2L7PQ6IED9 249 aa15.15■□□□□ 0.02
YIF1A-213ENST00000534374 TEX261Q6UWH6 196 aa15.15■□□□□ 0.02
YIF1A-213ENST00000534374 CHAC1Q9BUX1 264 aa15.15■□□□□ 0.02
YIF1A-213ENST00000534374 MYCBP2O75592 4640 aa15.14■□□□□ 0.01
YIF1A-213ENST00000534374 CLPSL2Q6UWE3 100 aa15.14■□□□□ 0.01
YIF1A-213ENST00000534374 PLA2G1BP04054 148 aaKnown RBP15.13■□□□□ 0.01
YIF1A-213ENST00000534374 CEBPGP53567 150 aa15.13■□□□□ 0.01
YIF1A-213ENST00000534374 SCXQ7RTU7 201 aa15.13■□□□□ 0.01
YIF1A-213ENST00000534374 FAM210AQ96ND0 272 aa15.13■□□□□ 0.01
YIF1A-213ENST00000534374 IGLV4-60A0A075B6I1 120 aa15.12■□□□□ 0.01
YIF1A-213ENST00000534374 UBE2L6O14933 153 aa15.12■□□□□ 0.01
YIF1A-213ENST00000534374 PRSS1P07477 247 aa15.12■□□□□ 0.01
YIF1A-213ENST00000534374 AMTP48728 403 aa15.12■□□□□ 0.01
YIF1A-213ENST00000534374 CLRN3Q8NCR9 226 aa15.12■□□□□ 0.01
YIF1A-213ENST00000534374 SMIM7Q9BQ49 75 aa15.12■□□□□ 0.01
YIF1A-213ENST00000534374 TRAV26-2A0A0B4J265 109 aa15.11■□□□□ 0.01
YIF1A-213ENST00000534374 LINC00528Q8N1L1 170 aa15.11■□□□□ 0.01
YIF1A-213ENST00000534374 NCR2O95944 276 aa15.1■□□□□ 0.01
YIF1A-213ENST00000534374 LINC01551Q86U37 167 aa15.1■□□□□ 0.01
YIF1A-213ENST00000534374 FAM231BA6NCW3 169 aa15.09■□□□□ 0.01
YIF1A-213ENST00000534374 ZNF727A8MUV8 499 aa15.09■□□□□ 0.01
YIF1A-213ENST00000534374 DEFB104AQ8WTQ1 72 aa15.09■□□□□ 0.01
YIF1A-213ENST00000534374 GFRA4Q9GZZ7 299 aa15.09■□□□□ 0.01
YIF1A-213ENST00000534374 IGLV10-54A0A075B6I4 117 aa15.08■□□□□ 0
YIF1A-213ENST00000534374 SRP19P09132 144 aaKnown RBP15.08■□□□□ 0
YIF1A-213ENST00000534374 C9orf163Q8N9P6 203 aa15.08■□□□□ 0
YIF1A-213ENST00000534374 CIRBP-AS1Q8TBR5 109 aa15.08■□□□□ 0
YIF1A-213ENST00000534374 TSKUQ8WUA8 353 aa15.08■□□□□ 0
YIF1A-213ENST00000534374 BORCS7Q96B45 105 aa15.08■□□□□ 0
YIF1A-213ENST00000534374 RPL39LQ96EH5 51 aaKnown RBP15.08■□□□□ 0
YIF1A-213ENST00000534374 OSTCQ9NRP0 149 aa15.08■□□□□ 0
YIF1A-213ENST00000534374 H7C423 109 aa15.07■□□□□ 0
YIF1A-213ENST00000534374 TRBV6-5A0A0K0K1A5 114 aa15.05■□□□□ -0
YIF1A-213ENST00000534374 A0A1B0GUT8 65 aa15.05■□□□□ -0
YIF1A-213ENST00000534374 SDHAF1A6NFY7 115 aa15.05■□□□□ -0
YIF1A-213ENST00000534374 HIGD1CA8MV81 97 aa15.05■□□□□ -0
YIF1A-213ENST00000534374 FAM74A3Q4VXF1 159 aa15.04■□□□□ -0
YIF1A-213ENST00000534374 TMEM191AQ9H0A3 160 aa15.04■□□□□ -0
YIF1A-213ENST00000534374 I3L3M4 83 aa15.02■□□□□ -0
YIF1A-213ENST00000534374 APCSP02743 223 aa15.02■□□□□ -0
YIF1A-213ENST00000534374 CNBPP62633 177 aaKnown RBP15.02■□□□□ -0
YIF1A-213ENST00000534374 TMEM241Q24JQ0 296 aa15.02■□□□□ -0
YIF1A-213ENST00000534374 AMMECR1LQ6DCA0 310 aa15.02■□□□□ -0
YIF1A-213ENST00000534374 PMCHP20382 165 aa15.01□□□□□ -0.01
YIF1A-213ENST00000534374 SDIM1Q6ZPB5 146 aa15.01□□□□□ -0.01
YIF1A-213ENST00000534374 hDV102S1A0JD36 115 aa15□□□□□ -0.01
YIF1A-213ENST00000534374 ST20Q9HBF5 79 aa15□□□□□ -0.01
YIF1A-213ENST00000534374 V9GYV3 84 aa15□□□□□ -0.01
YIF1A-213ENST00000534374 RAB4AP20338 218 aa14.99□□□□□ -0.01
YIF1A-213ENST00000534374 RNF185Q96GF1 192 aa14.99□□□□□ -0.01
YIF1A-213ENST00000534374 AP5S1Q9NUS5 200 aa14.99□□□□□ -0.01
YIF1A-213ENST00000534374 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.98□□□□□ -0.01
YIF1A-213ENST00000534374 IGKV2-29A2NJV5 120 aaPredicted RBP14.98□□□□□ -0.01
YIF1A-213ENST00000534374 FGF6P10767 208 aa14.98□□□□□ -0.01
YIF1A-213ENST00000534374 ZNF25P17030 456 aaPredicted RBP14.98□□□□□ -0.01
YIF1A-213ENST00000534374 RNASEKQ6P5S7 137 aaKnown RBP14.98□□□□□ -0.01
YIF1A-213ENST00000534374 CFAP161Q6P656 301 aa14.98□□□□□ -0.01
YIF1A-213ENST00000534374 ISOC2Q96AB3 205 aa14.98□□□□□ -0.01
YIF1A-213ENST00000534374 MRAP2Q96G30 205 aa14.98□□□□□ -0.01
YIF1A-213ENST00000534374 GAS8-AS1O95177 125 aa14.97□□□□□ -0.01
YIF1A-213ENST00000534374 ESDP10768 282 aa14.97□□□□□ -0.01
YIF1A-213ENST00000534374 POLR2KP53803 58 aaKnown RBP14.97□□□□□ -0.01
YIF1A-213ENST00000534374 RIGQ13278 110 aa14.97□□□□□ -0.01
YIF1A-213ENST00000534374 NUP35Q8NFH5 326 aa14.97□□□□□ -0.01
YIF1A-213ENST00000534374 SMDT1Q9H4I9 107 aa14.97□□□□□ -0.01
YIF1A-213ENST00000534374 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.96□□□□□ -0.01
YIF1A-213ENST00000534374 GAGE12HA6NDE8 117 aa14.96□□□□□ -0.01
YIF1A-213ENST00000534374 J3QL48 77 aa14.96□□□□□ -0.01
YIF1A-213ENST00000534374 KRTAP10-4P60372 401 aaPredicted RBP14.96□□□□□ -0.01
YIF1A-213ENST00000534374 RPL23P62829 140 aaKnown RBP14.96□□□□□ -0.01
YIF1A-213ENST00000534374 IGKV3OR2-268A0A0C4DH90 116 aa14.95□□□□□ -0.02
YIF1A-213ENST00000534374 TRBV27A0A0K0K1C4 114 aa14.95□□□□□ -0.02
YIF1A-213ENST00000534374 SLPIP03973 132 aa14.95□□□□□ -0.02
YIF1A-213ENST00000534374 PEA15Q15121 130 aa14.95□□□□□ -0.02
YIF1A-213ENST00000534374 AMN1Q8IY45 258 aa14.95□□□□□ -0.02
YIF1A-213ENST00000534374 NAT8Q9UHE5 227 aa14.95□□□□□ -0.02
YIF1A-213ENST00000534374 NAT8BQ9UHF3 227 aa14.95□□□□□ -0.02
YIF1A-213ENST00000534374 C9JQL5 133 aa14.94□□□□□ -0.02
YIF1A-213ENST00000534374 PPP1R17O96001 155 aa14.94□□□□□ -0.02
YIF1A-213ENST00000534374 TSHBP01222 138 aa14.94□□□□□ -0.02
YIF1A-213ENST00000534374 CHCHD10Q8WYQ3 142 aaPredicted RBP14.94□□□□□ -0.02
YIF1A-213ENST00000534374 BTF3L4Q96K17 158 aa14.94□□□□□ -0.02
YIF1A-213ENST00000534374 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.94□□□□□ -0.02
YIF1A-213ENST00000534374 RPS10P46783 165 aaKnown RBP14.93□□□□□ -0.02
YIF1A-213ENST00000534374 OR5A1Q8NGJ0 315 aa14.93□□□□□ -0.02
YIF1A-213ENST00000534374 TMEM101Q96IK0 257 aa14.93□□□□□ -0.02
YIF1A-213ENST00000534374 IGHV3-64A0A075B6Q5 118 aa14.92□□□□□ -0.02
YIF1A-213ENST00000534374 KRTAP29-1A8MX34 341 aaPredicted RBP14.92□□□□□ -0.02
YIF1A-213ENST00000534374 CIRBPQ14011 172 aaKnown RBP14.92□□□□□ -0.02
YIF1A-213ENST00000534374 VCYO14598 125 aa14.91□□□□□ -0.02
YIF1A-213ENST00000534374 ADIRFQ15847 76 aa14.91□□□□□ -0.02
YIF1A-213ENST00000534374 C15orf56Q8N910 161 aa14.91□□□□□ -0.02
YIF1A-213ENST00000534374 TMEM242Q9NWH2 141 aa14.91□□□□□ -0.02
YIF1A-213ENST00000534374 SMIM27A0A1W2PRY6 76 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms