RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 HMSDA8MTL9 139 aa11.35□□□□□ -0.59
UBXN1-216ENST00000533908 NTF3P20783 257 aa11.35□□□□□ -0.59
UBXN1-216ENST00000533908 PRSS3P2Q8NHM4 247 aa11.35□□□□□ -0.59
UBXN1-216ENST00000533908 F2Z2F3 143 aa11.34□□□□□ -0.59
UBXN1-216ENST00000533908 BCL2L11O43521 198 aa11.34□□□□□ -0.59
UBXN1-216ENST00000533908 TNXBP22105 4242 aa11.34□□□□□ -0.59
UBXN1-216ENST00000533908 LRP2P98164 4655 aa11.33□□□□□ -0.59
UBXN1-216ENST00000533908 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
UBXN1-216ENST00000533908 AMTP48728 403 aa11.33□□□□□ -0.6
UBXN1-216ENST00000533908 SULT1A2P50226 295 aa11.33□□□□□ -0.6
UBXN1-216ENST00000533908 HIGD2BQ4VC39 106 aa11.33□□□□□ -0.6
UBXN1-216ENST00000533908 DPH3P1Q9H4G8 78 aa11.33□□□□□ -0.6
UBXN1-216ENST00000533908 MANBALQ9NQG1 85 aa11.33□□□□□ -0.6
UBXN1-216ENST00000533908 TRAV1-1A0A0B4J248 108 aa11.32□□□□□ -0.6
UBXN1-216ENST00000533908 IGKV3OR2-268A0A0C4DH90 116 aa11.32□□□□□ -0.6
UBXN1-216ENST00000533908 COTL1Q14019 142 aa11.32□□□□□ -0.6
UBXN1-216ENST00000533908 RGS21Q2M5E4 152 aa11.32□□□□□ -0.6
UBXN1-216ENST00000533908 C9orf62Q8N4C0 152 aa11.32□□□□□ -0.6
UBXN1-216ENST00000533908 KANTRA0A1W2PQU2 76 aa11.31□□□□□ -0.6
UBXN1-216ENST00000533908 UBE2L6O14933 153 aa11.31□□□□□ -0.6
UBXN1-216ENST00000533908 IFNA1P01562 189 aa11.31□□□□□ -0.6
UBXN1-216ENST00000533908 TRGC1P0CF51 173 aa11.31□□□□□ -0.6
UBXN1-216ENST00000533908 RPS10P46783 165 aaKnown RBP11.31□□□□□ -0.6
UBXN1-216ENST00000533908 GNG4P50150 75 aa11.31□□□□□ -0.6
UBXN1-216ENST00000533908 WDR73Q6P4I2 378 aa11.31□□□□□ -0.6
UBXN1-216ENST00000533908 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
UBXN1-216ENST00000533908 LINC01600Q96MT4 127 aa11.31□□□□□ -0.6
UBXN1-216ENST00000533908 TRAV26-2A0A0B4J265 109 aa11.3□□□□□ -0.6
UBXN1-216ENST00000533908 IGKV2-24A0A0C4DH68 120 aa11.3□□□□□ -0.6
UBXN1-216ENST00000533908 MAJINQ3KP22 176 aa11.3□□□□□ -0.6
UBXN1-216ENST00000533908 NUDT10Q8NFP7 164 aa11.3□□□□□ -0.6
UBXN1-216ENST00000533908 GTSF1Q8WW33 167 aa11.3□□□□□ -0.6
UBXN1-216ENST00000533908 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
UBXN1-216ENST00000533908 NDUFS6O75380 124 aaKnown RBP11.29□□□□□ -0.6
UBXN1-216ENST00000533908 CTRLP40313 264 aa11.29□□□□□ -0.6
UBXN1-216ENST00000533908 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
UBXN1-216ENST00000533908 Q6ZNX1 250 aa11.29□□□□□ -0.6
UBXN1-216ENST00000533908 C7orf33Q8WU49 177 aa11.29□□□□□ -0.6
UBXN1-216ENST00000533908 CHCHD10Q8WYQ3 142 aaPredicted RBP11.29□□□□□ -0.6
UBXN1-216ENST00000533908 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
UBXN1-216ENST00000533908 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
UBXN1-216ENST00000533908 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
UBXN1-216ENST00000533908 STPG4Q8N801 248 aa11.28□□□□□ -0.6
UBXN1-216ENST00000533908 LYPD6BQ8NI32 183 aa11.28□□□□□ -0.6
UBXN1-216ENST00000533908 RNF213Q63HN8 5207 aa11.27□□□□□ -0.6
UBXN1-216ENST00000533908 A0A096LNI7 61 aa11.27□□□□□ -0.61
UBXN1-216ENST00000533908 FOXA3P55318 350 aaPredicted RBP11.27□□□□□ -0.61
UBXN1-216ENST00000533908 TWIST1Q15672 202 aa11.27□□□□□ -0.61
UBXN1-216ENST00000533908 RPL39LQ96EH5 51 aaKnown RBP11.27□□□□□ -0.61
UBXN1-216ENST00000533908 CNFNQ9BYD5 112 aa11.27□□□□□ -0.61
UBXN1-216ENST00000533908 MED9Q9NWA0 146 aa11.27□□□□□ -0.61
UBXN1-216ENST00000533908 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
UBXN1-216ENST00000533908 GVQW2A0A096LPI5 108 aaPredicted RBP11.26□□□□□ -0.61
UBXN1-216ENST00000533908 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
UBXN1-216ENST00000533908 EIF5AP63241 154 aaKnown RBP11.26□□□□□ -0.61
UBXN1-216ENST00000533908 MEF2BQ02080 365 aaPredicted RBP11.26□□□□□ -0.61
UBXN1-216ENST00000533908 FOXI1Q12951 378 aa11.26□□□□□ -0.61
UBXN1-216ENST00000533908 KRTAP10-8P60410 259 aa11.25□□□□□ -0.61
UBXN1-216ENST00000533908 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
UBXN1-216ENST00000533908 FAM231BA6NCW3 169 aa11.24□□□□□ -0.61
UBXN1-216ENST00000533908 PDE6DO43924 150 aa11.24□□□□□ -0.61
UBXN1-216ENST00000533908 FGF6P10767 208 aa11.24□□□□□ -0.61
UBXN1-216ENST00000533908 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
UBXN1-216ENST00000533908 RNASEKQ6P5S7 137 aaKnown RBP11.24□□□□□ -0.61
UBXN1-216ENST00000533908 RNASE7Q9H1E1 156 aaKnown RBP11.24□□□□□ -0.61
UBXN1-216ENST00000533908 K7EN84 100 aa11.23□□□□□ -0.61
UBXN1-216ENST00000533908 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
UBXN1-216ENST00000533908 NCR2O95944 276 aa11.22□□□□□ -0.61
UBXN1-216ENST00000533908 SRSF9Q13242 221 aaKnown RBP eCLIP11.22□□□□□ -0.61
UBXN1-216ENST00000533908 OCC1Q8TAD7 63 aa11.22□□□□□ -0.61
UBXN1-216ENST00000533908 RPP21Q9H633 154 aaKnown RBP11.22□□□□□ -0.61
UBXN1-216ENST00000533908 BIN3Q9NQY0 253 aa11.22□□□□□ -0.61
UBXN1-216ENST00000533908 H7C423 109 aa11.21□□□□□ -0.61
UBXN1-216ENST00000533908 GAS8-AS1O95177 125 aa11.21□□□□□ -0.61
UBXN1-216ENST00000533908 BCL2P10415 239 aa11.21□□□□□ -0.61
UBXN1-216ENST00000533908 SDHAF1A6NFY7 115 aa11.2□□□□□ -0.62
UBXN1-216ENST00000533908 APCSP02743 223 aa11.2□□□□□ -0.62
UBXN1-216ENST00000533908 XCL1P47992 114 aa11.2□□□□□ -0.62
UBXN1-216ENST00000533908 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
UBXN1-216ENST00000533908 LINC00959A0A1B0GUT2 108 aa11.19□□□□□ -0.62
UBXN1-216ENST00000533908 TEX46H3BTG2 121 aa11.19□□□□□ -0.62
UBXN1-216ENST00000533908 SPINK6Q6UWN8 80 aa11.19□□□□□ -0.62
UBXN1-216ENST00000533908 CCL25O15444 150 aa11.18□□□□□ -0.62
UBXN1-216ENST00000533908 ESDP10768 282 aa11.18□□□□□ -0.62
UBXN1-216ENST00000533908 TRBV6-5A0A0K0K1A5 114 aa11.16□□□□□ -0.62
UBXN1-216ENST00000533908 I3L3M4 83 aa11.16□□□□□ -0.62
UBXN1-216ENST00000533908 TSHBP01222 138 aa11.16□□□□□ -0.62
UBXN1-216ENST00000533908 ZNF25P17030 456 aaPredicted RBP11.16□□□□□ -0.62
UBXN1-216ENST00000533908 PMCHP20382 165 aa11.16□□□□□ -0.62
UBXN1-216ENST00000533908 EIF5AL1Q6IS14 154 aaKnown RBP11.16□□□□□ -0.62
UBXN1-216ENST00000533908 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
UBXN1-216ENST00000533908 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
UBXN1-216ENST00000533908 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
UBXN1-216ENST00000533908 TEX261Q6UWH6 196 aa11.14□□□□□ -0.63
UBXN1-216ENST00000533908 CDC42SE2Q9NRR3 84 aa11.14□□□□□ -0.63
UBXN1-216ENST00000533908 SYCNQ0VAF6 134 aa11.13□□□□□ -0.63
UBXN1-216ENST00000533908 REG3GQ6UW15 175 aa11.13□□□□□ -0.63
UBXN1-216ENST00000533908 Q6ZRP5 223 aa11.13□□□□□ -0.63
UBXN1-216ENST00000533908 SMIM15Q7Z3B0 74 aa11.13□□□□□ -0.63
UBXN1-216ENST00000533908 TMEM101Q96IK0 257 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms