RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 FAM74A7A6NL05 159 aa7.37□□□□□ -1.23
SVIP-205ENST00000533774 MT-ND6P03923 174 aa7.37□□□□□ -1.23
SVIP-205ENST00000533774 ATP6V0CP27449 155 aa7.37□□□□□ -1.23
SVIP-205ENST00000533774 NKX2-5P52952 324 aaPredicted RBP7.37□□□□□ -1.23
SVIP-205ENST00000533774 CYCSP99999 105 aaKnown RBP7.37□□□□□ -1.23
SVIP-205ENST00000533774 ZNF726P1Q15940 193 aa7.37□□□□□ -1.23
SVIP-205ENST00000533774 CARD19Q96LW7 228 aa7.37□□□□□ -1.23
SVIP-205ENST00000533774 LTAP01374 205 aa7.36□□□□□ -1.23
SVIP-205ENST00000533774 AMTP48728 403 aa7.36□□□□□ -1.23
SVIP-205ENST00000533774 CT83Q5H943 113 aa7.36□□□□□ -1.23
SVIP-205ENST00000533774 SUMO4Q6EEV6 95 aa7.36□□□□□ -1.23
SVIP-205ENST00000533774 PHF5AQ7RTV0 110 aaKnown RBP7.36□□□□□ -1.23
SVIP-205ENST00000533774 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
SVIP-205ENST00000533774 IGLV7-43P04211 117 aa7.35□□□□□ -1.23
SVIP-205ENST00000533774 OR5AL1P0C617 328 aa7.35□□□□□ -1.23
SVIP-205ENST00000533774 CTAG1AP78358 180 aa7.35□□□□□ -1.23
SVIP-205ENST00000533774 GAGE2BQ13066 116 aa7.35□□□□□ -1.23
SVIP-205ENST00000533774 SPANXN1Q5VSR9 72 aa7.35□□□□□ -1.23
SVIP-205ENST00000533774 FER1L6-AS1Q8NA97 138 aa7.35□□□□□ -1.23
SVIP-205ENST00000533774 HIST1H2BAQ96A08 127 aa7.35□□□□□ -1.23
SVIP-205ENST00000533774 FMC1Q96HJ9 113 aa7.35□□□□□ -1.23
SVIP-205ENST00000533774 PSMG3Q9BT73 122 aaPredicted RBP7.35□□□□□ -1.23
SVIP-205ENST00000533774 IGLV1-50A0A075B6I6 118 aa7.34□□□□□ -1.23
SVIP-205ENST00000533774 H0Y9J4 135 aa7.34□□□□□ -1.23
SVIP-205ENST00000533774 MGPP08493 103 aa7.34□□□□□ -1.23
SVIP-205ENST00000533774 CXCL1P09341 107 aa7.34□□□□□ -1.23
SVIP-205ENST00000533774 DIRC1Q969H9 104 aa7.34□□□□□ -1.23
SVIP-205ENST00000533774 PGLYRP4Q96LB8 373 aa7.34□□□□□ -1.23
SVIP-205ENST00000533774 ACTR3CQ9C0K3 210 aaPredicted RBP7.34□□□□□ -1.23
SVIP-205ENST00000533774 UBE2L6O14933 153 aa7.33□□□□□ -1.24
SVIP-205ENST00000533774 SYCNQ0VAF6 134 aa7.33□□□□□ -1.24
SVIP-205ENST00000533774 C9orf116Q5BN46 136 aaPredicted RBP7.33□□□□□ -1.24
SVIP-205ENST00000533774 PRSS47A8MTI9 375 aa7.32□□□□□ -1.24
SVIP-205ENST00000533774 SMIM17P0DL12 118 aa7.32□□□□□ -1.24
SVIP-205ENST00000533774 BCL2P10415 239 aa7.32□□□□□ -1.24
SVIP-205ENST00000533774 UBE2G1P62253 170 aa7.32□□□□□ -1.24
SVIP-205ENST00000533774 AP1S3Q96PC3 154 aa7.32□□□□□ -1.24
SVIP-205ENST00000533774 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
SVIP-205ENST00000533774 TNFSF18Q9UNG2 199 aa7.32□□□□□ -1.24
SVIP-205ENST00000533774 LOC107984640A0A0U1RRK4 108 aa7.31□□□□□ -1.24
SVIP-205ENST00000533774 MBP02144 154 aa7.31□□□□□ -1.24
SVIP-205ENST00000533774 PET100P0DJ07 73 aa7.31□□□□□ -1.24
SVIP-205ENST00000533774 XCL1P47992 114 aa7.31□□□□□ -1.24
SVIP-205ENST00000533774 SERF2P84101 59 aa7.31□□□□□ -1.24
SVIP-205ENST00000533774 PKIGQ9Y2B9 76 aa7.31□□□□□ -1.24
SVIP-205ENST00000533774 IGHV1-58A0A0C4DH39 117 aa7.3□□□□□ -1.24
SVIP-205ENST00000533774 TSPAN13O95857 204 aa7.3□□□□□ -1.24
SVIP-205ENST00000533774 RASL11AQ6T310 242 aa7.3□□□□□ -1.24
SVIP-205ENST00000533774 MLST8Q9BVC4 326 aa7.3□□□□□ -1.24
SVIP-205ENST00000533774 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.29□□□□□ -1.24
SVIP-205ENST00000533774 CTXND1A0A1B0GTU2 59 aa7.29□□□□□ -1.24
SVIP-205ENST00000533774 IGKV2-29A2NJV5 120 aaPredicted RBP7.29□□□□□ -1.24
SVIP-205ENST00000533774 COTL1Q14019 142 aa7.29□□□□□ -1.24
SVIP-205ENST00000533774 NKX6-2Q9C056 277 aaPredicted RBP7.29□□□□□ -1.24
SVIP-205ENST00000533774 NIT2Q9NQR4 276 aa7.29□□□□□ -1.24
SVIP-205ENST00000533774 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.28□□□□□ -1.24
SVIP-205ENST00000533774 CCL25O15444 150 aa7.28□□□□□ -1.24
SVIP-205ENST00000533774 AKR1C3P42330 323 aa7.28□□□□□ -1.24
SVIP-205ENST00000533774 MEF2BQ02080 365 aaPredicted RBP7.28□□□□□ -1.24
SVIP-205ENST00000533774 MZT2BQ6NZ67 158 aa7.28□□□□□ -1.24
SVIP-205ENST00000533774 Q6ZNX1 250 aa7.28□□□□□ -1.24
SVIP-205ENST00000533774 CCDC32Q9BV29 185 aa7.28□□□□□ -1.24
SVIP-205ENST00000533774 MED28Q9H204 178 aa7.28□□□□□ -1.24
SVIP-205ENST00000533774 IGLV4-69A0A075B6H9 119 aa7.27□□□□□ -1.25
SVIP-205ENST00000533774 LINC00959A0A1B0GUT2 108 aa7.27□□□□□ -1.25
SVIP-205ENST00000533774 CAMPP49913 170 aa7.27□□□□□ -1.25
SVIP-205ENST00000533774 RNASEKQ6P5S7 137 aaKnown RBP7.27□□□□□ -1.25
SVIP-205ENST00000533774 NUP35Q8NFH5 326 aa7.27□□□□□ -1.25
SVIP-205ENST00000533774 A0A087WZ39 114 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 TRAV1-1A0A0B4J248 108 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 FAM168BA1KXE4 195 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 INMT-MINDY4F8WBC2 141 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 IGLC6P0CF74 106 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 FGF6P10767 208 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 NTF3P20783 257 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 UBE2D1P51668 147 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 AMMECR1LQ6DCA0 310 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 OR5A1Q8NGJ0 315 aa7.26□□□□□ -1.25
SVIP-205ENST00000533774 EIF5AP63241 154 aaKnown RBP7.25□□□□□ -1.25
SVIP-205ENST00000533774 CST9LP1Q5W188 147 aa7.25□□□□□ -1.25
SVIP-205ENST00000533774 ENKURQ8TC29 256 aa7.25□□□□□ -1.25
SVIP-205ENST00000533774 SSNA1O43805 119 aa7.24□□□□□ -1.25
SVIP-205ENST00000533774 APOMO95445 188 aa7.24□□□□□ -1.25
SVIP-205ENST00000533774 RPL13AP40429 203 aaKnown RBP7.24□□□□□ -1.25
SVIP-205ENST00000533774 FHITP49789 147 aa7.24□□□□□ -1.25
SVIP-205ENST00000533774 DEFA1P59665 94 aa7.24□□□□□ -1.25
SVIP-205ENST00000533774 RPL18AQ02543 176 aaKnown RBP7.24□□□□□ -1.25
SVIP-205ENST00000533774 RNF151Q2KHN1 245 aa7.24□□□□□ -1.25
SVIP-205ENST00000533774 RPL7L1Q6DKI1 246 aaKnown RBP7.24□□□□□ -1.25
SVIP-205ENST00000533774 BAGE2Q86Y30 109 aa7.24□□□□□ -1.25
SVIP-205ENST00000533774 OPRPNQ99935 248 aaPredicted RBP7.24□□□□□ -1.25
SVIP-205ENST00000533774 TPPP3Q9BW30 176 aa7.24□□□□□ -1.25
SVIP-205ENST00000533774 IFITM3Q01628 133 aa7.23□□□□□ -1.25
SVIP-205ENST00000533774 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
SVIP-205ENST00000533774 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
SVIP-205ENST00000533774 GATD1Q8NB37 220 aa7.23□□□□□ -1.25
SVIP-205ENST00000533774 STOML3Q8TAV4 291 aa7.23□□□□□ -1.25
SVIP-205ENST00000533774 KRTAP4-12Q9BQ66 201 aa7.23□□□□□ -1.25
SVIP-205ENST00000533774 MAP1LC3B2A6NCE7 125 aa7.22□□□□□ -1.25
SVIP-205ENST00000533774 PAGE4O60829 102 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms