RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 COX11Q9Y6N1 276 aa11.49□□□□□ -0.57
FGFR1-239ENST00000533619 UBE2L6O14933 153 aa11.48□□□□□ -0.57
FGFR1-239ENST00000533619 GAS8-AS1O95177 125 aa11.48□□□□□ -0.57
FGFR1-239ENST00000533619 CKS2P33552 79 aa11.48□□□□□ -0.57
FGFR1-239ENST00000533619 POLR2KP53803 58 aaKnown RBP11.48□□□□□ -0.57
FGFR1-239ENST00000533619 GAGE6Q13070 117 aa11.48□□□□□ -0.57
FGFR1-239ENST00000533619 MPV17L2Q567V2 206 aa11.48□□□□□ -0.57
FGFR1-239ENST00000533619 TMEM70Q9BUB7 260 aa11.48□□□□□ -0.57
FGFR1-239ENST00000533619 TMEM242Q9NWH2 141 aa11.48□□□□□ -0.57
FGFR1-239ENST00000533619 FAT2Q9NYQ8 4349 aa11.48□□□□□ -0.57
FGFR1-239ENST00000533619 VCYO14598 125 aa11.47□□□□□ -0.57
FGFR1-239ENST00000533619 APCSP02743 223 aa11.47□□□□□ -0.57
FGFR1-239ENST00000533619 PPBPP02775 128 aa11.47□□□□□ -0.57
FGFR1-239ENST00000533619 RPS10P46783 165 aaKnown RBP11.47□□□□□ -0.57
FGFR1-239ENST00000533619 TRAV9-1A0A075B6T8 112 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 TRBV27A0A0K0K1C4 114 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 A0A1B0GUV1 79 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 SMKR1H3BMG3 65 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 H7C423 109 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 CRPP02741 224 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 ANGP03950 147 aaKnown RBP11.46□□□□□ -0.57
FGFR1-239ENST00000533619 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.57
FGFR1-239ENST00000533619 RBX1P62877 108 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 NRACQ8N912 160 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 UBE2WQ96B02 151 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 C20orf78Q9BR46 151 aa11.46□□□□□ -0.57
FGFR1-239ENST00000533619 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
FGFR1-239ENST00000533619 C7orf77A4D0Y5 90 aa11.45□□□□□ -0.58
FGFR1-239ENST00000533619 S100PP25815 95 aa11.45□□□□□ -0.58
FGFR1-239ENST00000533619 RHEBQ15382 184 aa11.45□□□□□ -0.58
FGFR1-239ENST00000533619 NDUFA5Q16718 116 aa11.45□□□□□ -0.58
FGFR1-239ENST00000533619 Q8N976 141 aa11.45□□□□□ -0.58
FGFR1-239ENST00000533619 DEFB104AQ8WTQ1 72 aa11.45□□□□□ -0.58
FGFR1-239ENST00000533619 CLRN3Q8NCR9 226 aa11.44□□□□□ -0.58
FGFR1-239ENST00000533619 A0A087WTM6 91 aa11.43□□□□□ -0.58
FGFR1-239ENST00000533619 D6R8Y8 96 aa11.43□□□□□ -0.58
FGFR1-239ENST00000533619 PHOX2AO14813 284 aa11.43□□□□□ -0.58
FGFR1-239ENST00000533619 TNFRSF6BO95407 300 aa11.43□□□□□ -0.58
FGFR1-239ENST00000533619 MIAQ16674 131 aa11.43□□□□□ -0.58
FGFR1-239ENST00000533619 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
FGFR1-239ENST00000533619 KIR2DL4Q99706 377 aa11.43□□□□□ -0.58
FGFR1-239ENST00000533619 IGKV2D-24A0A075B6R9 120 aa11.42□□□□□ -0.58
FGFR1-239ENST00000533619 TCAPO15273 167 aa11.42□□□□□ -0.58
FGFR1-239ENST00000533619 TSHBP01222 138 aa11.42□□□□□ -0.58
FGFR1-239ENST00000533619 RPL32P62910 135 aaKnown RBP11.42□□□□□ -0.58
FGFR1-239ENST00000533619 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
FGFR1-239ENST00000533619 ENHOQ6UWT2 76 aa11.42□□□□□ -0.58
FGFR1-239ENST00000533619 TMEM136Q6ZRR5 245 aa11.42□□□□□ -0.58
FGFR1-239ENST00000533619 RPS10P5Q9NQ39 176 aa11.42□□□□□ -0.58
FGFR1-239ENST00000533619 PKD1P98161 4303 aa11.41□□□□□ -0.58
FGFR1-239ENST00000533619 APOC3P02656 99 aa11.41□□□□□ -0.58
FGFR1-239ENST00000533619 FCER1GP30273 86 aa11.41□□□□□ -0.58
FGFR1-239ENST00000533619 SPATA12Q7Z6I5 190 aa11.41□□□□□ -0.58
FGFR1-239ENST00000533619 LINC00269Q8N2A0 174 aa11.41□□□□□ -0.58
FGFR1-239ENST00000533619 C1orf43Q9BWL3 253 aa11.41□□□□□ -0.58
FGFR1-239ENST00000533619 PRR34Q9NV39 138 aa11.41□□□□□ -0.58
FGFR1-239ENST00000533619 PGPEP1Q9NXJ5 209 aa11.41□□□□□ -0.58
FGFR1-239ENST00000533619 SNAPINO95295 136 aa11.4□□□□□ -0.58
FGFR1-239ENST00000533619 ESDP10768 282 aa11.4□□□□□ -0.58
FGFR1-239ENST00000533619 SVBPQ8N300 66 aa11.4□□□□□ -0.58
FGFR1-239ENST00000533619 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.58
FGFR1-239ENST00000533619 PRELID3AQ96N28 172 aa11.4□□□□□ -0.58
FGFR1-239ENST00000533619 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
FGFR1-239ENST00000533619 LRCOL1A6NCL2 159 aa11.39□□□□□ -0.59
FGFR1-239ENST00000533619 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
FGFR1-239ENST00000533619 REG3AQ06141 175 aa11.39□□□□□ -0.59
FGFR1-239ENST00000533619 SMAGPQ0VAQ4 97 aa11.39□□□□□ -0.59
FGFR1-239ENST00000533619 HECTD4Q9Y4D8 3996 aa11.39□□□□□ -0.59
FGFR1-239ENST00000533619 BIRC6Q9NR09 4857 aa11.39□□□□□ -0.59
FGFR1-239ENST00000533619 IGLV4-60A0A075B6I1 120 aa11.38□□□□□ -0.59
FGFR1-239ENST00000533619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.38□□□□□ -0.59
FGFR1-239ENST00000533619 TRAV8-4A0A0B4J246 113 aa11.38□□□□□ -0.59
FGFR1-239ENST00000533619 IGKV2-29A2NJV5 120 aaPredicted RBP11.38□□□□□ -0.59
FGFR1-239ENST00000533619 FGF6P10767 208 aa11.38□□□□□ -0.59
FGFR1-239ENST00000533619 COX19Q49B96 90 aa11.38□□□□□ -0.59
FGFR1-239ENST00000533619 RNASEKQ6P5S7 137 aaKnown RBP11.38□□□□□ -0.59
FGFR1-239ENST00000533619 TMEM101Q96IK0 257 aa11.38□□□□□ -0.59
FGFR1-239ENST00000533619 C16orf90A8MZG2 172 aa11.37□□□□□ -0.59
FGFR1-239ENST00000533619 NPYP01303 97 aa11.37□□□□□ -0.59
FGFR1-239ENST00000533619 CDPF1Q6NVV7 123 aa11.37□□□□□ -0.59
FGFR1-239ENST00000533619 TMEM18Q96B42 140 aa11.37□□□□□ -0.59
FGFR1-239ENST00000533619 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
FGFR1-239ENST00000533619 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
FGFR1-239ENST00000533619 HLA-DQA1P01909 254 aa11.35□□□□□ -0.59
FGFR1-239ENST00000533619 KRTAP10-2P60368 255 aa11.35□□□□□ -0.59
FGFR1-239ENST00000533619 CLPSL2Q6UWE3 100 aa11.35□□□□□ -0.59
FGFR1-239ENST00000533619 MRPL52Q86TS9 123 aaKnown RBP11.35□□□□□ -0.59
FGFR1-239ENST00000533619 GNB1LQ9BYB4 327 aa11.35□□□□□ -0.59
FGFR1-239ENST00000533619 RAB5AP20339 215 aa11.34□□□□□ -0.59
FGFR1-239ENST00000533619 DGAT2L7PQ6IED9 249 aa11.34□□□□□ -0.59
FGFR1-239ENST00000533619 Q8N814 137 aa11.34□□□□□ -0.59
FGFR1-239ENST00000533619 MAPKAPK5-AS1Q8N8E1 139 aa11.34□□□□□ -0.59
FGFR1-239ENST00000533619 OR5A1Q8NGJ0 315 aa11.34□□□□□ -0.59
FGFR1-239ENST00000533619 NTN5Q8WTR8 489 aaPredicted RBP11.34□□□□□ -0.59
FGFR1-239ENST00000533619 BAALCQ8WXS3 180 aa11.34□□□□□ -0.59
FGFR1-239ENST00000533619 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
FGFR1-239ENST00000533619 DNAH11Q96DT5 4516 aa11.34□□□□□ -0.59
FGFR1-239ENST00000533619 MT-ND6P03923 174 aa11.32□□□□□ -0.6
FGFR1-239ENST00000533619 CSDC2Q9Y534 153 aaKnown RBP11.32□□□□□ -0.6
FGFR1-239ENST00000533619 C14orf177Q52M58 125 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms