RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 MRPL18Q9H0U6 180 aaKnown RBP7.57□□□□□ -1.2
CLCF1-202ENST00000533438 TRAPPC1Q9Y5R8 145 aa7.57□□□□□ -1.2
CLCF1-202ENST00000533438 VPS13BQ7Z7G8 4022 aa7.57□□□□□ -1.2
CLCF1-202ENST00000533438 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
CLCF1-202ENST00000533438 FAT1Q14517 4588 aa7.56□□□□□ -1.2
CLCF1-202ENST00000533438 PPBPP02775 128 aa7.56□□□□□ -1.2
CLCF1-202ENST00000533438 MGPP08493 103 aa7.56□□□□□ -1.2
CLCF1-202ENST00000533438 ZNF56Q15929 161 aa7.56□□□□□ -1.2
CLCF1-202ENST00000533438 MRPL51Q4U2R6 128 aaKnown RBP7.56□□□□□ -1.2
CLCF1-202ENST00000533438 EPM2AB3EWF7 344 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 F5H697 171 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 PHOX2AO14813 284 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 PSCAO43653 123 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 IGHV3-30P01768 117 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 IGHV3-33P01772 117 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 IGHV3-30-3P0DP02 117 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 IGHV3-30-5P0DP03 117 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 GCSHP23434 173 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 FABP9Q0Z7S8 132 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 LAGE3Q14657 143 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 SUMO4Q6EEV6 95 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.55□□□□□ -1.2
CLCF1-202ENST00000533438 Q9UF83 564 aa7.55□□□□□ -1.2
CLCF1-202ENST00000533438 TRAV26-2A0A0B4J265 109 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 GAGE12JA6NER3 117 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 H7C1H1 209 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 M0QY20 66 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 TRGC2P03986 189 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 GAGE1Q13065 139 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 GAGE4Q13068 117 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 GAGE5Q13069 117 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 GAGE13Q4V321 117 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 ORMDL3Q8N138 153 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 NTN5Q8WTR8 489 aaPredicted RBP7.54□□□□□ -1.2
CLCF1-202ENST00000533438 Q9HAA7 133 aa7.54□□□□□ -1.2
CLCF1-202ENST00000533438 TRBV10-1A0A0K0K1A3 114 aa7.53□□□□□ -1.2
CLCF1-202ENST00000533438 D6R8Y8 96 aa7.53□□□□□ -1.2
CLCF1-202ENST00000533438 CKS2P33552 79 aa7.53□□□□□ -1.2
CLCF1-202ENST00000533438 KIAA1644Q3SXP7 199 aa7.53□□□□□ -1.2
CLCF1-202ENST00000533438 Q8N3U1 123 aa7.53□□□□□ -1.2
CLCF1-202ENST00000533438 Q8N814 137 aa7.53□□□□□ -1.2
CLCF1-202ENST00000533438 LAMTOR2Q9Y2Q5 125 aa7.53□□□□□ -1.2
CLCF1-202ENST00000533438 IGLV5-52A0A0A0MRZ9 124 aa7.52□□□□□ -1.21
CLCF1-202ENST00000533438 SMKR1H3BMG3 65 aa7.52□□□□□ -1.21
CLCF1-202ENST00000533438 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
CLCF1-202ENST00000533438 NCR2O95944 276 aa7.52□□□□□ -1.21
CLCF1-202ENST00000533438 PPP1R17O96001 155 aa7.52□□□□□ -1.21
CLCF1-202ENST00000533438 INAFM2P0DMQ5 153 aa7.52□□□□□ -1.21
CLCF1-202ENST00000533438 NRACQ8N912 160 aa7.52□□□□□ -1.21
CLCF1-202ENST00000533438 PRELID3AQ96N28 172 aa7.52□□□□□ -1.21
CLCF1-202ENST00000533438 ALKBH7Q9BT30 221 aaPredicted RBP7.52□□□□□ -1.21
CLCF1-202ENST00000533438 TRBV6-5A0A0K0K1A5 114 aa7.51□□□□□ -1.21
CLCF1-202ENST00000533438 Q5VSD8 79 aa7.51□□□□□ -1.21
CLCF1-202ENST00000533438 DNAJC30Q96LL9 226 aa7.51□□□□□ -1.21
CLCF1-202ENST00000533438 NIT2Q9NQR4 276 aa7.51□□□□□ -1.21
CLCF1-202ENST00000533438 DNAH8Q96JB1 4490 aa7.5□□□□□ -1.21
CLCF1-202ENST00000533438 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
CLCF1-202ENST00000533438 TNFRSF6BO95407 300 aa7.5□□□□□ -1.21
CLCF1-202ENST00000533438 NPYP01303 97 aa7.5□□□□□ -1.21
CLCF1-202ENST00000533438 DAZ4Q86SG3 579 aaKnown RBP7.5□□□□□ -1.21
CLCF1-202ENST00000533438 NEXN-AS1Q8NBZ9 246 aa7.5□□□□□ -1.21
CLCF1-202ENST00000533438 RPL39LQ96EH5 51 aaKnown RBP7.5□□□□□ -1.21
CLCF1-202ENST00000533438 C20orf78Q9BR46 151 aa7.5□□□□□ -1.21
CLCF1-202ENST00000533438 TMEM70Q9BUB7 260 aa7.5□□□□□ -1.21
CLCF1-202ENST00000533438 TM2D2Q9BX73 214 aa7.5□□□□□ -1.21
CLCF1-202ENST00000533438 DAZ3Q9NR90 486 aaKnown RBP7.5□□□□□ -1.21
CLCF1-202ENST00000533438 TRAV8-3A0A0A6YYJ7 113 aa7.49□□□□□ -1.21
CLCF1-202ENST00000533438 C1orf196B1AJZ1 125 aa7.49□□□□□ -1.21
CLCF1-202ENST00000533438 SMR3BP02814 79 aaPredicted RBP7.49□□□□□ -1.21
CLCF1-202ENST00000533438 SUMO2P61956 95 aaKnown RBP7.49□□□□□ -1.21
CLCF1-202ENST00000533438 RPL32P62910 135 aaKnown RBP7.49□□□□□ -1.21
CLCF1-202ENST00000533438 RPL36AP83881 106 aaKnown RBP7.49□□□□□ -1.21
CLCF1-202ENST00000533438 WFDC2Q14508 124 aa7.49□□□□□ -1.21
CLCF1-202ENST00000533438 NIT1Q86X76 327 aa7.49□□□□□ -1.21
CLCF1-202ENST00000533438 RPL36ALQ969Q0 106 aaKnown RBP7.49□□□□□ -1.21
CLCF1-202ENST00000533438 TRBV7-3A0A075B6L6 115 aa7.48□□□□□ -1.21
CLCF1-202ENST00000533438 POLR2KP53803 58 aaKnown RBP7.48□□□□□ -1.21
CLCF1-202ENST00000533438 HAMPP81172 84 aa7.48□□□□□ -1.21
CLCF1-202ENST00000533438 C18orf32Q8TCD1 76 aa7.48□□□□□ -1.21
CLCF1-202ENST00000533438 MAP1LC3AQ9H492 121 aa7.48□□□□□ -1.21
CLCF1-202ENST00000533438 ST20Q9HBF5 79 aa7.48□□□□□ -1.21
CLCF1-202ENST00000533438 FAM30AQ9NZY2 134 aa7.48□□□□□ -1.21
CLCF1-202ENST00000533438 SDHAF1A6NFY7 115 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 UBE2D3P61077 147 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 UBE2D2P62837 147 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 Q0VG73 95 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
CLCF1-202ENST00000533438 TRBV27A0A0K0K1C4 114 aa7.46□□□□□ -1.22
CLCF1-202ENST00000533438 RAB5BP61020 215 aa7.46□□□□□ -1.22
CLCF1-202ENST00000533438 Q6ZSA8 131 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms