RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NCR2O95944 276 aa13.56□□□□□ -0.24
CCS-208ENST00000533244 ANGP03950 147 aaKnown RBP13.56□□□□□ -0.24
CCS-208ENST00000533244 PRR34Q9NV39 138 aa13.56□□□□□ -0.24
CCS-208ENST00000533244 A0A1B0GXF2 115 aa13.56□□□□□ -0.24
CCS-208ENST00000533244 RPS10P46783 165 aaKnown RBP13.56□□□□□ -0.24
CCS-208ENST00000533244 AMTP48728 403 aa13.56□□□□□ -0.24
CCS-208ENST00000533244 DEFB104AQ8WTQ1 72 aa13.56□□□□□ -0.24
CCS-208ENST00000533244 A0A1B0GUV1 79 aa13.55□□□□□ -0.24
CCS-208ENST00000533244 WFDC2Q14508 124 aa13.55□□□□□ -0.24
CCS-208ENST00000533244 FAM104BQ5XKR9 115 aa13.55□□□□□ -0.24
CCS-208ENST00000533244 Q8N814 137 aa13.55□□□□□ -0.24
CCS-208ENST00000533244 APOBP04114 4563 aaKnown RBP13.54□□□□□ -0.24
CCS-208ENST00000533244 IGKV2D-24A0A075B6R9 120 aa13.54□□□□□ -0.24
CCS-208ENST00000533244 CRPP02741 224 aa13.54□□□□□ -0.24
CCS-208ENST00000533244 ADCYAP1P18509 176 aa13.54□□□□□ -0.24
CCS-208ENST00000533244 FUSP35637 526 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCS-208ENST00000533244 POLR2KP53803 58 aaKnown RBP13.54□□□□□ -0.24
CCS-208ENST00000533244 C20orf203Q8NBC4 194 aa13.54□□□□□ -0.24
CCS-208ENST00000533244 TMEM70Q9BUB7 260 aa13.54□□□□□ -0.24
CCS-208ENST00000533244 CAMPP49913 170 aa13.53□□□□□ -0.24
CCS-208ENST00000533244 ANAPC16Q96DE5 110 aa13.53□□□□□ -0.24
CCS-208ENST00000533244 ST20Q9HBF5 79 aa13.53□□□□□ -0.24
CCS-208ENST00000533244 TMEM218A2RU14 115 aa13.52□□□□□ -0.25
CCS-208ENST00000533244 SMKR1H3BMG3 65 aa13.52□□□□□ -0.25
CCS-208ENST00000533244 I3L3M4 83 aa13.52□□□□□ -0.25
CCS-208ENST00000533244 CDK2AP2O75956 126 aa13.52□□□□□ -0.25
CCS-208ENST00000533244 MT-ND4LP03901 98 aa13.52□□□□□ -0.25
CCS-208ENST00000533244 HBBP68871 147 aa13.52□□□□□ -0.25
CCS-208ENST00000533244 MIAQ16674 131 aa13.52□□□□□ -0.25
CCS-208ENST00000533244 MRPL51Q4U2R6 128 aaKnown RBP13.52□□□□□ -0.25
CCS-208ENST00000533244 MRPL54Q6P161 138 aaKnown RBP13.52□□□□□ -0.25
CCS-208ENST00000533244 NRACQ8N912 160 aa13.52□□□□□ -0.25
CCS-208ENST00000533244 NTN5Q8WTR8 489 aaPredicted RBP13.52□□□□□ -0.25
CCS-208ENST00000533244 HSPG2P98160 4391 aa13.52□□□□□ -0.25
CCS-208ENST00000533244 IGLV4-60A0A075B6I1 120 aa13.51□□□□□ -0.25
CCS-208ENST00000533244 TRBV27A0A0K0K1C4 114 aa13.51□□□□□ -0.25
CCS-208ENST00000533244 S100A8P05109 93 aa13.51□□□□□ -0.25
CCS-208ENST00000533244 ATP5L2Q7Z4Y8 100 aa13.51□□□□□ -0.25
CCS-208ENST00000533244 LINC00269Q8N2A0 174 aa13.51□□□□□ -0.25
CCS-208ENST00000533244 C1orf43Q9BWL3 253 aa13.51□□□□□ -0.25
CCS-208ENST00000533244 PPP1R17O96001 155 aa13.5□□□□□ -0.25
CCS-208ENST00000533244 APCSP02743 223 aa13.5□□□□□ -0.25
CCS-208ENST00000533244 PMCHP20382 165 aa13.5□□□□□ -0.25
CCS-208ENST00000533244 UBE2L6O14933 153 aa13.49□□□□□ -0.25
CCS-208ENST00000533244 TSHBP01222 138 aa13.49□□□□□ -0.25
CCS-208ENST00000533244 BAALCQ8WXS3 180 aa13.49□□□□□ -0.25
CCS-208ENST00000533244 LINC00862A6NCI5 91 aa13.48□□□□□ -0.25
CCS-208ENST00000533244 H7C423 109 aa13.48□□□□□ -0.25
CCS-208ENST00000533244 ESDP10768 282 aa13.48□□□□□ -0.25
CCS-208ENST00000533244 KRTAP26-1Q6PEX3 210 aa13.48□□□□□ -0.25
CCS-208ENST00000533244 COMMD7Q86VX2 200 aa13.48□□□□□ -0.25
CCS-208ENST00000533244 F8W036 122 aa13.47□□□□□ -0.25
CCS-208ENST00000533244 LECT2O14960 151 aa13.47□□□□□ -0.25
CCS-208ENST00000533244 REG3AQ06141 175 aa13.47□□□□□ -0.25
CCS-208ENST00000533244 CLPSL2Q6UWE3 100 aa13.47□□□□□ -0.25
CCS-208ENST00000533244 TMEM242Q9NWH2 141 aa13.47□□□□□ -0.25
CCS-208ENST00000533244 TRBV24-1A0A075B6N3 115 aa13.47□□□□□ -0.25
CCS-208ENST00000533244 SUMO2P61956 95 aaKnown RBP13.47□□□□□ -0.25
CCS-208ENST00000533244 SEC11CQ9BY50 192 aa13.47□□□□□ -0.25
CCS-208ENST00000533244 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.46□□□□□ -0.26
CCS-208ENST00000533244 IGLV5-52A0A0A0MRZ9 124 aa13.46□□□□□ -0.26
CCS-208ENST00000533244 IGKV2-29A2NJV5 120 aaPredicted RBP13.46□□□□□ -0.26
CCS-208ENST00000533244 VCYO14598 125 aa13.45□□□□□ -0.26
CCS-208ENST00000533244 KRTAP10-1P60331 282 aa13.45□□□□□ -0.26
CCS-208ENST00000533244 FGF6P10767 208 aa13.44□□□□□ -0.26
CCS-208ENST00000533244 GCSHP23434 173 aa13.44□□□□□ -0.26
CCS-208ENST00000533244 CKS2P33552 79 aa13.44□□□□□ -0.26
CCS-208ENST00000533244 RPL32P62910 135 aaKnown RBP13.44□□□□□ -0.26
CCS-208ENST00000533244 C20orf78Q9BR46 151 aa13.44□□□□□ -0.26
CCS-208ENST00000533244 TRAV8-4A0A0B4J246 113 aa13.43□□□□□ -0.26
CCS-208ENST00000533244 ZNF25P17030 456 aaPredicted RBP13.43□□□□□ -0.26
CCS-208ENST00000533244 IMMP2LQ96T52 175 aa13.43□□□□□ -0.26
CCS-208ENST00000533244 D6R8Y8 96 aa13.42□□□□□ -0.26
CCS-208ENST00000533244 TNFRSF6BO95407 300 aa13.42□□□□□ -0.26
CCS-208ENST00000533244 PPBPP02775 128 aa13.42□□□□□ -0.26
CCS-208ENST00000533244 C10orf91Q5T1B1 145 aa13.42□□□□□ -0.26
CCS-208ENST00000533244 AMMECR1LQ6DCA0 310 aa13.42□□□□□ -0.26
CCS-208ENST00000533244 BTF3L4Q96K17 158 aa13.42□□□□□ -0.26
CCS-208ENST00000533244 PHOX2AO14813 284 aa13.41□□□□□ -0.26
CCS-208ENST00000533244 MRPL52Q86TS9 123 aaKnown RBP13.41□□□□□ -0.26
CCS-208ENST00000533244 CTDSP1Q9GZU7 261 aa13.41□□□□□ -0.26
CCS-208ENST00000533244 C7orf77A4D0Y5 90 aa13.4□□□□□ -0.26
CCS-208ENST00000533244 HLA-DQA1P01909 254 aa13.4□□□□□ -0.26
CCS-208ENST00000533244 RNASEKQ6P5S7 137 aaKnown RBP13.4□□□□□ -0.26
CCS-208ENST00000533244 KIR2DL4Q99706 377 aa13.4□□□□□ -0.26
CCS-208ENST00000533244 IGLV10-54A0A075B6I4 117 aa13.39□□□□□ -0.27
CCS-208ENST00000533244 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.39□□□□□ -0.27
CCS-208ENST00000533244 NPYP01303 97 aa13.39□□□□□ -0.27
CCS-208ENST00000533244 CARHSP1Q9Y2V2 147 aaKnown RBP13.39□□□□□ -0.27
CCS-208ENST00000533244 DNAH8Q96JB1 4490 aa13.39□□□□□ -0.27
CCS-208ENST00000533244 FCER1GP30273 86 aa13.39□□□□□ -0.27
CCS-208ENST00000533244 C14orf177Q52M58 125 aa13.39□□□□□ -0.27
CCS-208ENST00000533244 ORMDL3Q8N138 153 aa13.39□□□□□ -0.27
CCS-208ENST00000533244 SMIM2Q9BVW6 85 aa13.39□□□□□ -0.27
CCS-208ENST00000533244 KRTAP17-1Q9BYP8 105 aa13.39□□□□□ -0.27
CCS-208ENST00000533244 USP17L23D6RBM5 183 aa13.38□□□□□ -0.27
CCS-208ENST00000533244 XGP55808 180 aa13.37□□□□□ -0.27
CCS-208ENST00000533244 TMEM136Q6ZRR5 245 aa13.37□□□□□ -0.27
CCS-208ENST00000533244 TRAV9-1A0A075B6T8 112 aa13.36□□□□□ -0.27
CCS-208ENST00000533244 TCAPO15273 167 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 327.5 ms