RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PIK3CD-AS1Q5SR53 167 aa13.2□□□□□ -0.3
SMPD1-208ENST00000533123 Q8NAQ8 132 aa13.2□□□□□ -0.3
SMPD1-208ENST00000533123 Q6ZSN1 163 aa13.19□□□□□ -0.3
SMPD1-208ENST00000533123 IFI27L1Q96BM0 104 aa13.19□□□□□ -0.3
SMPD1-208ENST00000533123 TRGV1A0A0A0MS02 117 aa13.19□□□□□ -0.3
SMPD1-208ENST00000533123 P0DMU3 169 aa13.19□□□□□ -0.3
SMPD1-208ENST00000533123 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
SMPD1-208ENST00000533123 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
SMPD1-208ENST00000533123 TM2D3Q9BRN9 247 aa13.19□□□□□ -0.3
SMPD1-208ENST00000533123 PRKDCP78527 4128 aaKnown RBP13.18□□□□□ -0.3
SMPD1-208ENST00000533123 SDHAF1A6NFY7 115 aa13.18□□□□□ -0.3
SMPD1-208ENST00000533123 FGF6P10767 208 aa13.18□□□□□ -0.3
SMPD1-208ENST00000533123 POLR2KP53803 58 aaKnown RBP13.18□□□□□ -0.3
SMPD1-208ENST00000533123 DAZ2Q13117 558 aaKnown RBP13.18□□□□□ -0.3
SMPD1-208ENST00000533123 HUWE1Q7Z6Z7 4374 aaKnown RBP13.18□□□□□ -0.3
SMPD1-208ENST00000533123 Q6ZTI0 123 aa13.17□□□□□ -0.3
SMPD1-208ENST00000533123 SPATA25Q9BR10 227 aa13.17□□□□□ -0.3
SMPD1-208ENST00000533123 DNAH9Q9NYC9 4486 aa13.17□□□□□ -0.3
SMPD1-208ENST00000533123 COL7A1Q02388 2944 aa13.17□□□□□ -0.3
SMPD1-208ENST00000533123 TRBV6-5A0A0K0K1A5 114 aa13.17□□□□□ -0.3
SMPD1-208ENST00000533123 GAGE12BA1L429 117 aa13.17□□□□□ -0.3
SMPD1-208ENST00000533123 TMEM97Q5BJF2 176 aa13.17□□□□□ -0.3
SMPD1-208ENST00000533123 Q9UF83 564 aa13.17□□□□□ -0.3
SMPD1-208ENST00000533123 SEC11AP67812 179 aa13.16□□□□□ -0.3
SMPD1-208ENST00000533123 VPS25Q9BRG1 176 aa13.16□□□□□ -0.3
SMPD1-208ENST00000533123 RS1O15537 224 aa13.16□□□□□ -0.3
SMPD1-208ENST00000533123 RPL32P62910 135 aaKnown RBP13.16□□□□□ -0.3
SMPD1-208ENST00000533123 ORMDL2Q53FV1 153 aa13.16□□□□□ -0.3
SMPD1-208ENST00000533123 VCYO14598 125 aa13.15□□□□□ -0.31
SMPD1-208ENST00000533123 B9D2Q9BPU9 175 aa13.15□□□□□ -0.31
SMPD1-208ENST00000533123 TRBV27A0A0K0K1C4 114 aa13.14□□□□□ -0.31
SMPD1-208ENST00000533123 GAGE7O76087 117 aa13.14□□□□□ -0.31
SMPD1-208ENST00000533123 GAGE12FP0CL80 117 aa13.14□□□□□ -0.31
SMPD1-208ENST00000533123 GAGE12GP0CL81 117 aa13.14□□□□□ -0.31
SMPD1-208ENST00000533123 GAGE12IP0CL82 117 aa13.14□□□□□ -0.31
SMPD1-208ENST00000533123 LGALS9BQ3B8N2 356 aa13.14□□□□□ -0.31
SMPD1-208ENST00000533123 FAM222AQ5U5X8 452 aa13.14□□□□□ -0.31
SMPD1-208ENST00000533123 H7C1H1 209 aa13.13□□□□□ -0.31
SMPD1-208ENST00000533123 K7EMI3 77 aa13.13□□□□□ -0.31
SMPD1-208ENST00000533123 RHODO00212 210 aa13.13□□□□□ -0.31
SMPD1-208ENST00000533123 LGALS9CQ6DKI2 356 aa13.13□□□□□ -0.31
SMPD1-208ENST00000533123 BOD1L2Q8IYS8 172 aa13.13□□□□□ -0.31
SMPD1-208ENST00000533123 EDA2RQ9HAV5 297 aa13.13□□□□□ -0.31
SMPD1-208ENST00000533123 IGHV3-53P01767 116 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 DEFB130BP0DP73 79 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 DEFB130AP0DP74 79 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 ZFP2Q6ZN57 461 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 ZNF479Q96JC4 524 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 KIR2DL4Q99706 377 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 ZMAT4Q9H898 229 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 DKK2Q9UBU2 259 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 C2orf66Q6UXQ4 117 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 TOMM6Q96B49 74 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 CELA1Q9UNI1 258 aa13.12□□□□□ -0.31
SMPD1-208ENST00000533123 TRGV2A0A075B6R0 118 aa13.11□□□□□ -0.31
SMPD1-208ENST00000533123 GAGE10A6NGK3 116 aa13.11□□□□□ -0.31
SMPD1-208ENST00000533123 K7ERU9 68 aa13.11□□□□□ -0.31
SMPD1-208ENST00000533123 A0A0J9YWU9 116 aa13.1□□□□□ -0.31
SMPD1-208ENST00000533123 C9orf118A6NHY6 69 aa13.1□□□□□ -0.31
SMPD1-208ENST00000533123 LYRM9A8MSI8 78 aa13.1□□□□□ -0.31
SMPD1-208ENST00000533123 H3BRM9 83 aa13.1□□□□□ -0.31
SMPD1-208ENST00000533123 ATP5LO75964 103 aa13.1□□□□□ -0.31
SMPD1-208ENST00000533123 PRSS1P07477 247 aa13.1□□□□□ -0.31
SMPD1-208ENST00000533123 TSHBP01222 138 aa13.09□□□□□ -0.31
SMPD1-208ENST00000533123 NEXN-AS1Q8NBZ9 246 aa13.09□□□□□ -0.31
SMPD1-208ENST00000533123 SCGB3A1Q96QR1 104 aa13.09□□□□□ -0.31
SMPD1-208ENST00000533123 STAB2Q8WWQ8 2551 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 A6NDN8 102 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 SPART-AS1P0CW21 52 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 RPL39P62891 51 aaKnown RBP13.08□□□□□ -0.32
SMPD1-208ENST00000533123 TNFRSF18Q9Y5U5 241 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 TRAV4A0A0B4J268 109 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 I3L3M4 83 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 TCTAP57738 103 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 HSD52Q0P140 79 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 ODF1Q14990 250 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 LINC00612Q8N6U2 182 aa13.08□□□□□ -0.32
SMPD1-208ENST00000533123 C11orf68Q9H3H3 251 aaKnown RBP13.08□□□□□ -0.32
SMPD1-208ENST00000533123 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.07□□□□□ -0.32
SMPD1-208ENST00000533123 GTF2H5Q6ZYL4 71 aa13.07□□□□□ -0.32
SMPD1-208ENST00000533123 SIVA1O15304 175 aa13.07□□□□□ -0.32
SMPD1-208ENST00000533123 CYSLTR1Q9Y271 337 aa13.07□□□□□ -0.32
SMPD1-208ENST00000533123 FBN3Q75N90 2809 aa13.06□□□□□ -0.32
SMPD1-208ENST00000533123 H3BUT2 72 aa13.06□□□□□ -0.32
SMPD1-208ENST00000533123 DAD1P61803 113 aa13.05□□□□□ -0.32
SMPD1-208ENST00000533123 K7EP34 96 aa13.05□□□□□ -0.32
SMPD1-208ENST00000533123 PCP2Q8IVA1 136 aa13.05□□□□□ -0.32
SMPD1-208ENST00000533123 IGHV3-38A0A0C4DH36 116 aa13.04□□□□□ -0.32
SMPD1-208ENST00000533123 NAA38Q9BRA0 125 aaKnown RBP13.04□□□□□ -0.32
SMPD1-208ENST00000533123 RHOHQ15669 191 aa13.04□□□□□ -0.32
SMPD1-208ENST00000533123 PHLDA1Q8WV24 401 aaPredicted RBP13.04□□□□□ -0.32
SMPD1-208ENST00000533123 SLC25A29Q8N8R3 303 aa13.03□□□□□ -0.32
SMPD1-208ENST00000533123 IGIPA6NJ69 53 aa13.03□□□□□ -0.32
SMPD1-208ENST00000533123 NMUP48645 174 aa13.03□□□□□ -0.32
SMPD1-208ENST00000533123 BAALCQ8WXS3 180 aa13.03□□□□□ -0.32
SMPD1-208ENST00000533123 K7EQD1 137 aa13.02□□□□□ -0.33
SMPD1-208ENST00000533123 NHLRC4P0CG21 123 aaPredicted RBP13.02□□□□□ -0.33
SMPD1-208ENST00000533123 C12orf74Q32Q52 190 aa13.02□□□□□ -0.33
SMPD1-208ENST00000533123 DNAJC30Q96LL9 226 aa13.02□□□□□ -0.33
SMPD1-208ENST00000533123 MRPL35Q9NZE8 188 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms