RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 A0A0J9YY99 117 aa9.99□□□□□ -0.81
TRIM3-212ENST00000533064 POLR2KP53803 58 aaKnown RBP9.99□□□□□ -0.81
TRIM3-212ENST00000533064 LINC00173Q6ZV60 143 aa9.99□□□□□ -0.81
TRIM3-212ENST00000533064 TMEM70Q9BUB7 260 aa9.99□□□□□ -0.81
TRIM3-212ENST00000533064 TRBV7-3A0A075B6L6 115 aa9.98□□□□□ -0.81
TRIM3-212ENST00000533064 GYPEP15421 78 aa9.98□□□□□ -0.81
TRIM3-212ENST00000533064 Q8N976 141 aa9.98□□□□□ -0.81
TRIM3-212ENST00000533064 ZNRF2Q8NHG8 242 aa9.98□□□□□ -0.81
TRIM3-212ENST00000533064 MAP1LC3CQ9BXW4 147 aa9.98□□□□□ -0.81
TRIM3-212ENST00000533064 VCYO14598 125 aa9.97□□□□□ -0.81
TRIM3-212ENST00000533064 TCAPO15273 167 aa9.97□□□□□ -0.81
TRIM3-212ENST00000533064 ORMDL2Q53FV1 153 aa9.97□□□□□ -0.81
TRIM3-212ENST00000533064 PHLDA1Q8WV24 401 aaPredicted RBP9.97□□□□□ -0.81
TRIM3-212ENST00000533064 GAGE12JA6NER3 117 aa9.96□□□□□ -0.81
TRIM3-212ENST00000533064 SDHAF1A6NFY7 115 aa9.96□□□□□ -0.81
TRIM3-212ENST00000533064 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.81
TRIM3-212ENST00000533064 GAGE1Q13065 139 aa9.96□□□□□ -0.81
TRIM3-212ENST00000533064 GAGE4Q13068 117 aa9.96□□□□□ -0.81
TRIM3-212ENST00000533064 GAGE5Q13069 117 aa9.96□□□□□ -0.81
TRIM3-212ENST00000533064 GAGE13Q4V321 117 aa9.96□□□□□ -0.81
TRIM3-212ENST00000533064 TRBV27A0A0K0K1C4 114 aa9.96□□□□□ -0.82
TRIM3-212ENST00000533064 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
TRIM3-212ENST00000533064 H3BNG1 76 aa9.96□□□□□ -0.82
TRIM3-212ENST00000533064 VSIG2Q96IQ7 327 aa9.96□□□□□ -0.82
TRIM3-212ENST00000533064 Q9UF83 564 aa9.96□□□□□ -0.82
TRIM3-212ENST00000533064 ICOSQ9Y6W8 199 aa9.96□□□□□ -0.82
TRIM3-212ENST00000533064 NUDT3O95989 172 aa9.95□□□□□ -0.82
TRIM3-212ENST00000533064 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
TRIM3-212ENST00000533064 PET117Q6UWS5 81 aa9.95□□□□□ -0.82
TRIM3-212ENST00000533064 TEX43Q6ZNM6 134 aa9.95□□□□□ -0.82
TRIM3-212ENST00000533064 KIR2DL4Q99706 377 aa9.95□□□□□ -0.82
TRIM3-212ENST00000533064 LBHQ53QV2 105 aaPredicted RBP9.94□□□□□ -0.82
TRIM3-212ENST00000533064 SH2D6Q7Z4S9 175 aa9.94□□□□□ -0.82
TRIM3-212ENST00000533064 SPATA12Q7Z6I5 190 aa9.94□□□□□ -0.82
TRIM3-212ENST00000533064 DAZ4Q86SG3 579 aaKnown RBP9.94□□□□□ -0.82
TRIM3-212ENST00000533064 IFI27L1Q96BM0 104 aa9.94□□□□□ -0.82
TRIM3-212ENST00000533064 DAZ3Q9NR90 486 aaKnown RBP9.94□□□□□ -0.82
TRIM3-212ENST00000533064 C20orf202A1L168 122 aa9.93□□□□□ -0.82
TRIM3-212ENST00000533064 G0S2P27469 103 aa9.93□□□□□ -0.82
TRIM3-212ENST00000533064 UBE2D3P61077 147 aa9.93□□□□□ -0.82
TRIM3-212ENST00000533064 UBE2D2P62837 147 aa9.93□□□□□ -0.82
TRIM3-212ENST00000533064 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
TRIM3-212ENST00000533064 I3L3M4 83 aa9.93□□□□□ -0.82
TRIM3-212ENST00000533064 C15orf53Q8NAA6 179 aa9.93□□□□□ -0.82
TRIM3-212ENST00000533064 ATP6V0E2Q8NHE4 81 aa9.93□□□□□ -0.82
TRIM3-212ENST00000533064 DNAH7Q8WXX0 4024 aa9.92□□□□□ -0.82
TRIM3-212ENST00000533064 NUPR2A6NF83 97 aa9.92□□□□□ -0.82
TRIM3-212ENST00000533064 ATP5LO75964 103 aa9.92□□□□□ -0.82
TRIM3-212ENST00000533064 LINC01545Q5VT33 79 aa9.92□□□□□ -0.82
TRIM3-212ENST00000533064 TOMM6Q96B49 74 aa9.92□□□□□ -0.82
TRIM3-212ENST00000533064 IGHV3-38A0A0C4DH36 116 aa9.91□□□□□ -0.82
TRIM3-212ENST00000533064 LINC01549A6NIU2 74 aa9.91□□□□□ -0.82
TRIM3-212ENST00000533064 IGLL5B9A064 214 aa9.91□□□□□ -0.82
TRIM3-212ENST00000533064 COTL1Q14019 142 aa9.91□□□□□ -0.82
TRIM3-212ENST00000533064 ANKRD39Q53RE8 183 aa9.91□□□□□ -0.82
TRIM3-212ENST00000533064 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
TRIM3-212ENST00000533064 A0A096LPF7 62 aa9.9□□□□□ -0.82
TRIM3-212ENST00000533064 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
TRIM3-212ENST00000533064 TMEM97Q5BJF2 176 aa9.9□□□□□ -0.82
TRIM3-212ENST00000533064 VAMP8Q9BV40 100 aa9.9□□□□□ -0.82
TRIM3-212ENST00000533064 H0Y8G0 127 aa9.9□□□□□ -0.83
TRIM3-212ENST00000533064 CEMP1Q6PRD7 247 aaPredicted RBP9.9□□□□□ -0.83
TRIM3-212ENST00000533064 C2orf66Q6UXQ4 117 aa9.9□□□□□ -0.83
TRIM3-212ENST00000533064 ZNF664Q8N3J9 261 aa9.9□□□□□ -0.83
TRIM3-212ENST00000533064 WWC2-AS2Q96NR7 200 aa9.9□□□□□ -0.83
TRIM3-212ENST00000533064 TSHBP01222 138 aa9.89□□□□□ -0.83
TRIM3-212ENST00000533064 PKIAP61925 76 aa9.89□□□□□ -0.83
TRIM3-212ENST00000533064 LGALS9CQ6DKI2 356 aa9.89□□□□□ -0.83
TRIM3-212ENST00000533064 GTSF1LQ9H1H1 148 aa9.89□□□□□ -0.83
TRIM3-212ENST00000533064 CYSLTR1Q9Y271 337 aa9.89□□□□□ -0.83
TRIM3-212ENST00000533064 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.88□□□□□ -0.83
TRIM3-212ENST00000533064 DEFB104AQ8WTQ1 72 aa9.88□□□□□ -0.83
TRIM3-212ENST00000533064 SCGB3A1Q96QR1 104 aa9.88□□□□□ -0.83
TRIM3-212ENST00000533064 TSTD3H0UI37 97 aa9.87□□□□□ -0.83
TRIM3-212ENST00000533064 ATOH7Q8N100 152 aa9.87□□□□□ -0.83
TRIM3-212ENST00000533064 CBY1Q9Y3M2 126 aa9.87□□□□□ -0.83
TRIM3-212ENST00000533064 CSMD3Q7Z407 3707 aa9.87□□□□□ -0.83
TRIM3-212ENST00000533064 PRSS1P07477 247 aa9.87□□□□□ -0.83
TRIM3-212ENST00000533064 ERASQ7Z444 233 aa9.87□□□□□ -0.83
TRIM3-212ENST00000533064 MUC7Q8TAX7 377 aa9.87□□□□□ -0.83
TRIM3-212ENST00000533064 PAM16Q9Y3D7 125 aa9.87□□□□□ -0.83
TRIM3-212ENST00000533064 TRBV25-1A0A075B6N4 114 aa9.86□□□□□ -0.83
TRIM3-212ENST00000533064 TRAV9-2A0A087WT02 112 aa9.86□□□□□ -0.83
TRIM3-212ENST00000533064 PRO1933Q9H354 126 aa9.86□□□□□ -0.83
TRIM3-212ENST00000533064 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
TRIM3-212ENST00000533064 TCTAP57738 103 aa9.85□□□□□ -0.83
TRIM3-212ENST00000533064 Q6ZN92 141 aa9.85□□□□□ -0.83
TRIM3-212ENST00000533064 RPL39P62891 51 aaKnown RBP9.84□□□□□ -0.83
TRIM3-212ENST00000533064 ODF1Q14990 250 aa9.84□□□□□ -0.83
TRIM3-212ENST00000533064 SPATA45Q537H7 98 aa9.84□□□□□ -0.83
TRIM3-212ENST00000533064 ZFAND6Q6FIF0 208 aa9.84□□□□□ -0.83
TRIM3-212ENST00000533064 C20orf203Q8NBC4 194 aa9.84□□□□□ -0.83
TRIM3-212ENST00000533064 TIMM17AQ99595 171 aa9.84□□□□□ -0.83
TRIM3-212ENST00000533064 PMCHL2Q9BQD1 86 aa9.84□□□□□ -0.83
TRIM3-212ENST00000533064 TENM2Q9NT68 2774 aa9.84□□□□□ -0.83
TRIM3-212ENST00000533064 TRAV12-1A0A0B4J245 112 aa9.83□□□□□ -0.84
TRIM3-212ENST00000533064 IGIPA6NJ69 53 aa9.83□□□□□ -0.84
TRIM3-212ENST00000533064 UBE2L6O14933 153 aa9.83□□□□□ -0.84
TRIM3-212ENST00000533064 TIRAPP58753 221 aa9.83□□□□□ -0.84
TRIM3-212ENST00000533064 LYPD5Q6UWN5 251 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms