RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 PPP1R1CQ8WVI7 109 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 ZNF625Q96I27 306 aaPredicted RBP0.76□□□□□ -2.29
KNL1-211ENST00000533001 TIMM21Q9BVV7 248 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 IGLV7-46A0A075B6I9 117 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 TRAV26-2A0A0B4J265 109 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 CEBPZOSA8MTT3 80 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 UPK1BO75841 260 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 C1orf195Q5TG92 126 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 PQLC2Q6ZP29 291 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 LINC00167Q96N53 147 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 TXNDC17Q9BRA2 123 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 TM2D2Q9BX73 214 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 UQCC1Q9NVA1 299 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 IGKV2D-24A0A075B6R9 120 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 IGKV2-24A0A0C4DH68 120 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 MUC21A0A140T8X8 626 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 RPL37P61927 97 aaKnown RBP0.75□□□□□ -2.29
KNL1-211ENST00000533001 LINC00299Q6ZSB3 139 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 CLVS1Q8IUQ0 354 aaPredicted RBP0.75□□□□□ -2.29
KNL1-211ENST00000533001 C5orf17Q8NAS9 161 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 Q96NJ1 140 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 TMEM147Q9BVK8 224 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 MBD2Q9UBB5 411 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 RABL2AQ9UBK7 228 aaPredicted RBP0.75□□□□□ -2.29
KNL1-211ENST00000533001 HSPB11Q9Y547 144 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 TRAV6A0A075B6T7 132 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 TRAV1-1A0A0B4J248 108 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 INMT-MINDY4F8WBC2 141 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 RAB4AP20338 218 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 Q6ZUT4 128 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 CENPSQ8N2Z9 138 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 TIMM9Q9Y5J7 89 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 HMGB3O15347 200 aaKnown RBP0.75□□□□□ -2.29
KNL1-211ENST00000533001 AKR1C4P17516 323 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 MOBPQ13875 183 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 OR10J3Q5JRS4 329 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 C20orf166-AS1Q96NR2 134 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 TMEM208Q9BTX3 173 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 NMES1Q9C002 83 aa0.75□□□□□ -2.29
KNL1-211ENST00000533001 SMIM1B2RUZ4 78 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 RPL39P62891 51 aaKnown RBP0.74□□□□□ -2.29
KNL1-211ENST00000533001 SUMO1P63165 101 aaKnown RBP0.74□□□□□ -2.29
KNL1-211ENST00000533001 MAJINQ3KP22 176 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 C2orf50Q96LR7 162 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 NUDT15Q9NV35 164 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 GSKIPQ9P0R6 139 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 C22orf24Q9Y442 160 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 UBE2L5PA0A1B0GUS4 154 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 A8MUU9 505 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 RHODO00212 210 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 CCL25O15444 150 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 PSCAO43653 123 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 Q0VG73 95 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 C7orf50Q9BRJ6 194 aaKnown RBP0.74□□□□□ -2.29
KNL1-211ENST00000533001 TREM1Q9NP99 234 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 TNFSF18Q9UNG2 199 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.74□□□□□ -2.29
KNL1-211ENST00000533001 IGKV2-29A2NJV5 120 aaPredicted RBP0.74□□□□□ -2.29
KNL1-211ENST00000533001 NDUFC2-KCTD14E9PQ53 114 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 SCGB2B2Q4G0G5 96 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 MYCBPQ99417 103 aaPredicted RBP0.74□□□□□ -2.29
KNL1-211ENST00000533001 C1orf43Q9BWL3 253 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 IGLV4-3A0A075B6K6 122 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 BCE1O60756 84 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 RHOBP62745 196 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 SYCNQ0VAF6 134 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 PRR4Q16378 134 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 RPL7L1Q6DKI1 246 aaKnown RBP0.74□□□□□ -2.29
KNL1-211ENST00000533001 DAND5Q8N907 189 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 DIRC1Q969H9 104 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 PFDN5Q99471 154 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 FABP5P3A8MUU1 101 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 F5H697 171 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 PEX7O00628 323 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 MRPS36P82909 103 aaKnown RBP0.74□□□□□ -2.29
KNL1-211ENST00000533001 PNRC1Q12796 327 aaPredicted RBP0.74□□□□□ -2.29
KNL1-211ENST00000533001 KRTAP15-1Q3LI76 137 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 C7orf33Q8WU49 177 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 NIT2Q9NQR4 276 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 CACFD1Q9UGQ2 172 aa0.74□□□□□ -2.29
KNL1-211ENST00000533001 TRGV11A0A075B6L2 103 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 hDV102S1A0JD36 115 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 M0R036 132 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 PGAM2P15259 253 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 S100A11P31949 105 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 UBE2D1P51668 147 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 GAGE6Q13070 117 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 SOSTDC1Q6X4U4 206 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 SCN3BQ9NY72 215 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 TRAV9-2A0A087WT02 112 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 CBX3Q13185 183 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 KIAA1644Q3SXP7 199 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 ZFP69Q49AA0 526 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 TMEM78Q5T7P6 136 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 FAM159AQ6UWV7 190 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 CCDC90BQ9GZT6 254 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 A0A087WXM4 84 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 A0A0G2JQZ4 141 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 HLA-DQA1P01909 254 aa0.73□□□□□ -2.29
KNL1-211ENST00000533001 CAMPP49913 170 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms