RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 TMEM263Q8WUH6 116 aaKnown RBP13.2□□□□□ -0.3
UBXN1-213ENST00000532904 IGLV4-3A0A075B6K6 122 aa13.2□□□□□ -0.3
UBXN1-213ENST00000532904 A0A0B4J2C4 111 aa13.2□□□□□ -0.3
UBXN1-213ENST00000532904 KRTAP1-1Q07627 177 aa13.2□□□□□ -0.3
UBXN1-213ENST00000532904 SPINK13Q1W4C9 94 aa13.2□□□□□ -0.3
UBXN1-213ENST00000532904 HELZ2Q9BYK8 2649 aaKnown RBP13.19□□□□□ -0.3
UBXN1-213ENST00000532904 CKS1BP61024 79 aa13.19□□□□□ -0.3
UBXN1-213ENST00000532904 NBPF19A0A087WUL8 3843 aa13.19□□□□□ -0.3
UBXN1-213ENST00000532904 M0QXV9 152 aa13.19□□□□□ -0.3
UBXN1-213ENST00000532904 HOXD3P31249 432 aaPredicted RBP13.19□□□□□ -0.3
UBXN1-213ENST00000532904 A0A0J9YXV3 536 aa13.18□□□□□ -0.3
UBXN1-213ENST00000532904 SPINK8P0C7L1 97 aa13.18□□□□□ -0.3
UBXN1-213ENST00000532904 Q6ZUT4 128 aa13.18□□□□□ -0.3
UBXN1-213ENST00000532904 MUSTN1Q8IVN3 82 aa13.18□□□□□ -0.3
UBXN1-213ENST00000532904 ANKRD29Q8N6D5 301 aa13.18□□□□□ -0.3
UBXN1-213ENST00000532904 DUX5Q96PT3 197 aa13.18□□□□□ -0.3
UBXN1-213ENST00000532904 PDZD2O15018 2839 aa13.18□□□□□ -0.3
UBXN1-213ENST00000532904 TRGV11A0A075B6L2 103 aa13.17□□□□□ -0.3
UBXN1-213ENST00000532904 TRAV2A0A0B4J234 112 aa13.17□□□□□ -0.3
UBXN1-213ENST00000532904 M0R2P5 195 aa13.17□□□□□ -0.3
UBXN1-213ENST00000532904 SYNJ2BPP57105 145 aa13.17□□□□□ -0.3
UBXN1-213ENST00000532904 EDA2RQ9HAV5 297 aa13.17□□□□□ -0.3
UBXN1-213ENST00000532904 MT-ATP8P03928 68 aa13.17□□□□□ -0.3
UBXN1-213ENST00000532904 RAX2Q96IS3 184 aa13.17□□□□□ -0.3
UBXN1-213ENST00000532904 ERG28Q9UKR5 140 aa13.17□□□□□ -0.3
UBXN1-213ENST00000532904 IGHV3-64A0A075B6Q5 118 aa13.16□□□□□ -0.3
UBXN1-213ENST00000532904 DNAJC9-AS1A6NH13 148 aa13.16□□□□□ -0.3
UBXN1-213ENST00000532904 XGP55808 180 aa13.16□□□□□ -0.3
UBXN1-213ENST00000532904 CCDC168Q8NDH2 2452 aa13.16□□□□□ -0.3
UBXN1-213ENST00000532904 PYGO1Q9Y3Y4 419 aa13.16□□□□□ -0.3
UBXN1-213ENST00000532904 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.16□□□□□ -0.3
UBXN1-213ENST00000532904 C4orf3Q8WVX3 66 aa13.16□□□□□ -0.3
UBXN1-213ENST00000532904 FLNAP21333 2647 aaKnown RBP13.15□□□□□ -0.3
UBXN1-213ENST00000532904 TLN2Q9Y4G6 2542 aa13.15□□□□□ -0.3
UBXN1-213ENST00000532904 A0A0J9YXY3 114 aa13.15□□□□□ -0.3
UBXN1-213ENST00000532904 SLC25A20O43772 301 aa13.15□□□□□ -0.3
UBXN1-213ENST00000532904 Q6ZSV7 163 aa13.15□□□□□ -0.3
UBXN1-213ENST00000532904 FAM104AQ969W3 186 aa13.14□□□□□ -0.31
UBXN1-213ENST00000532904 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
UBXN1-213ENST00000532904 MRPS36P82909 103 aaKnown RBP13.13□□□□□ -0.31
UBXN1-213ENST00000532904 ZNF469Q96JG9 3925 aaPredicted RBP13.13□□□□□ -0.31
UBXN1-213ENST00000532904 C9JAW5 83 aa13.12□□□□□ -0.31
UBXN1-213ENST00000532904 YAE1D1Q9NRH1 226 aa13.12□□□□□ -0.31
UBXN1-213ENST00000532904 CD28P10747 220 aa13.12□□□□□ -0.31
UBXN1-213ENST00000532904 TMEM262E9PQX1 116 aa13.11□□□□□ -0.31
UBXN1-213ENST00000532904 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
UBXN1-213ENST00000532904 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
UBXN1-213ENST00000532904 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
UBXN1-213ENST00000532904 LITAFQ99732 161 aa13.11□□□□□ -0.31
UBXN1-213ENST00000532904 SPXQ9BT56 116 aa13.11□□□□□ -0.31
UBXN1-213ENST00000532904 TIMM21Q9BVV7 248 aa13.11□□□□□ -0.31
UBXN1-213ENST00000532904 H7C2G1 150 aa13.11□□□□□ -0.31
UBXN1-213ENST00000532904 GEMIN7Q9H840 131 aaKnown RBP13.11□□□□□ -0.31
UBXN1-213ENST00000532904 ESM1Q9NQ30 184 aa13.11□□□□□ -0.31
UBXN1-213ENST00000532904 C18orf65Q6ZTR6 163 aa13.1□□□□□ -0.31
UBXN1-213ENST00000532904 LINC01600Q96MT4 127 aa13.1□□□□□ -0.31
UBXN1-213ENST00000532904 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
UBXN1-213ENST00000532904 MYO9AB2RTY4 2548 aa13.1□□□□□ -0.31
UBXN1-213ENST00000532904 UNC79Q9P2D8 2635 aa13.1□□□□□ -0.31
UBXN1-213ENST00000532904 ATXN8Q156A1 80 aa13.09□□□□□ -0.31
UBXN1-213ENST00000532904 SONP18583 2426 aaKnown RBP13.09□□□□□ -0.31
UBXN1-213ENST00000532904 TRBV30A0A0K0K1B3 111 aa13.09□□□□□ -0.31
UBXN1-213ENST00000532904 SLURP1P55000 103 aa13.09□□□□□ -0.31
UBXN1-213ENST00000532904 RNASE1P07998 156 aaKnown RBP13.08□□□□□ -0.32
UBXN1-213ENST00000532904 Q1RN00 199 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 ITPR2Q14571 2701 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 IGHV3-73A0A0B4J1V6 119 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 IGHV1-58A0A0C4DH39 117 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 PROK1P58294 105 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 DEFB136Q30KP8 78 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 LINC01620Q4KN68 170 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 SPANXDQ9BXN6 97 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 C16orf95Q9H693 158 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 SPANXCQ9NY87 97 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 TNFRSF18Q9Y5U5 241 aa13.08□□□□□ -0.32
UBXN1-213ENST00000532904 A8MTW9 85 aa13.07□□□□□ -0.32
UBXN1-213ENST00000532904 ADARB2-AS1A8MUL3 147 aa13.07□□□□□ -0.32
UBXN1-213ENST00000532904 TRAV8-3A0A0A6YYJ7 113 aa13.06□□□□□ -0.32
UBXN1-213ENST00000532904 TINCRA0A1B0GVN0 87 aa13.06□□□□□ -0.32
UBXN1-213ENST00000532904 CEMP1Q6PRD7 247 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-213ENST00000532904 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
UBXN1-213ENST00000532904 PIK3CD-AS1Q5SR53 167 aa13.06□□□□□ -0.32
UBXN1-213ENST00000532904 SPANXA1Q9NS26 97 aa13.06□□□□□ -0.32
UBXN1-213ENST00000532904 TRIAP1O43715 76 aa13.05□□□□□ -0.32
UBXN1-213ENST00000532904 KHDC1LQ5JSQ8 128 aa13.05□□□□□ -0.32
UBXN1-213ENST00000532904 CHCHD7Q9BUK0 85 aa13.05□□□□□ -0.32
UBXN1-213ENST00000532904 NDUFA12Q9UI09 145 aa13.05□□□□□ -0.32
UBXN1-213ENST00000532904 HTN1P15515 57 aa13.04□□□□□ -0.32
UBXN1-213ENST00000532904 VSIG2Q96IQ7 327 aa13.04□□□□□ -0.32
UBXN1-213ENST00000532904 ADAMTSL4-AS1Q5T5F5 129 aa13.04□□□□□ -0.32
UBXN1-213ENST00000532904 NTN5Q8WTR8 489 aaPredicted RBP13.04□□□□□ -0.32
UBXN1-213ENST00000532904 UBE2D4Q9Y2X8 147 aa13.04□□□□□ -0.32
UBXN1-213ENST00000532904 TRBV10-2A0A0K0K1G8 114 aa13.03□□□□□ -0.32
UBXN1-213ENST00000532904 MIAQ16674 131 aa13.03□□□□□ -0.32
UBXN1-213ENST00000532904 RNASE13Q5GAN3 156 aaKnown RBP13.03□□□□□ -0.32
UBXN1-213ENST00000532904 TRAV26-1A0A087WT03 109 aa13.03□□□□□ -0.32
UBXN1-213ENST00000532904 H3BMM0 161 aa13.03□□□□□ -0.32
UBXN1-213ENST00000532904 PRSS2P07478 247 aa13.03□□□□□ -0.32
UBXN1-213ENST00000532904 DEFB131AP59861 70 aa13.03□□□□□ -0.32
UBXN1-213ENST00000532904 Q6ZSN1 163 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms