RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TMEM243Q9BU79 118 aa15.12■□□□□ 0.01
LRRK1-208ENST00000532029 TRBV24-1A0A075B6N3 115 aa15.11■□□□□ 0.01
LRRK1-208ENST00000532029 VCYO14598 125 aa15.11■□□□□ 0.01
LRRK1-208ENST00000532029 PHOX2AO14813 284 aa15.11■□□□□ 0.01
LRRK1-208ENST00000532029 ELOBQ15370 118 aa15.11■□□□□ 0.01
LRRK1-208ENST00000532029 CHCHD7Q9BUK0 85 aa15.11■□□□□ 0.01
LRRK1-208ENST00000532029 GNB1LQ9BYB4 327 aa15.11■□□□□ 0.01
LRRK1-208ENST00000532029 KMT2AQ03164 3969 aa15.1■□□□□ 0.01
LRRK1-208ENST00000532029 TGIF2-C20orf24A0A0A6YYL0 155 aa15.1■□□□□ 0.01
LRRK1-208ENST00000532029 TRBV27A0A0K0K1C4 114 aa15.1■□□□□ 0.01
LRRK1-208ENST00000532029 NPYP01303 97 aa15.1■□□□□ 0.01
LRRK1-208ENST00000532029 APCSP02743 223 aa15.1■□□□□ 0.01
LRRK1-208ENST00000532029 GAGE6Q13070 117 aa15.1■□□□□ 0.01
LRRK1-208ENST00000532029 C6orf223Q8N319 242 aa15.1■□□□□ 0.01
LRRK1-208ENST00000532029 EPPK1P58107 5090 aaKnown RBP15.1■□□□□ 0.01
LRRK1-208ENST00000532029 BTF3P20290 206 aaKnown RBP15.09■□□□□ 0.01
LRRK1-208ENST00000532029 Q8N3U1 123 aa15.09■□□□□ 0.01
LRRK1-208ENST00000532029 LAMTOR2Q9Y2Q5 125 aa15.09■□□□□ 0.01
LRRK1-208ENST00000532029 UBE2L6O14933 153 aa15.08■□□□□ 0
LRRK1-208ENST00000532029 MT-ND6P03923 174 aa15.08■□□□□ 0
LRRK1-208ENST00000532029 KIR2DL4Q99706 377 aa15.08■□□□□ 0
LRRK1-208ENST00000532029 SMCO4Q9NRQ5 59 aa15.08■□□□□ 0
LRRK1-208ENST00000532029 TSHBP01222 138 aa15.07■□□□□ 0
LRRK1-208ENST00000532029 FCER1GP30273 86 aa15.07■□□□□ 0
LRRK1-208ENST00000532029 RPL32P62910 135 aaKnown RBP15.07■□□□□ 0
LRRK1-208ENST00000532029 IBA57-AS1B1ANH7 110 aa15.06■□□□□ 0
LRRK1-208ENST00000532029 SMIM2Q9BVW6 85 aa15.06■□□□□ 0
LRRK1-208ENST00000532029 KIAA1644Q3SXP7 199 aa15.05■□□□□ -0
LRRK1-208ENST00000532029 MPV17L2Q567V2 206 aa15.05■□□□□ -0
LRRK1-208ENST00000532029 CBLN2Q8IUK8 224 aa15.05■□□□□ -0
LRRK1-208ENST00000532029 NFE4Q86UQ8 179 aa15.04■□□□□ -0
LRRK1-208ENST00000532029 MRPL18Q9H0U6 180 aaKnown RBP15.04■□□□□ -0
LRRK1-208ENST00000532029 MAP1LC3AQ9H492 121 aa15.04■□□□□ -0
LRRK1-208ENST00000532029 KLK12Q9UKR0 248 aa15.04■□□□□ -0
LRRK1-208ENST00000532029 TCAPO15273 167 aa15.03■□□□□ -0
LRRK1-208ENST00000532029 RBX1P62877 108 aa15.03■□□□□ -0
LRRK1-208ENST00000532029 FABP9Q0Z7S8 132 aa15.03■□□□□ -0
LRRK1-208ENST00000532029 LAGE3Q14657 143 aa15.03■□□□□ -0
LRRK1-208ENST00000532029 Q8N976 141 aa15.03■□□□□ -0
LRRK1-208ENST00000532029 H7C423 109 aa15.02■□□□□ -0
LRRK1-208ENST00000532029 RTL8CO15255 209 aa15.02■□□□□ -0
LRRK1-208ENST00000532029 YPEL4Q96NS1 127 aa15.02■□□□□ -0
LRRK1-208ENST00000532029 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.01□□□□□ -0.01
LRRK1-208ENST00000532029 LOC389332A0A1B0GUA5 103 aa15.01□□□□□ -0.01
LRRK1-208ENST00000532029 IGKV2-29A2NJV5 120 aaPredicted RBP15.01□□□□□ -0.01
LRRK1-208ENST00000532029 ANGP03950 147 aaKnown RBP15.01□□□□□ -0.01
LRRK1-208ENST00000532029 AMMECR1LQ6DCA0 310 aa15.01□□□□□ -0.01
LRRK1-208ENST00000532029 LINC00336Q6ZUF6 198 aa15.01□□□□□ -0.01
LRRK1-208ENST00000532029 Q9HAA7 133 aa15.01□□□□□ -0.01
LRRK1-208ENST00000532029 TRAPPC1Q9Y5R8 145 aa15.01□□□□□ -0.01
LRRK1-208ENST00000532029 TRAV8-3A0A0A6YYJ7 113 aa15□□□□□ -0.01
LRRK1-208ENST00000532029 PRSS47A8MTI9 375 aa15□□□□□ -0.01
LRRK1-208ENST00000532029 ESDP10768 282 aa15□□□□□ -0.01
LRRK1-208ENST00000532029 A0A1B0GUV1 79 aa14.99□□□□□ -0.01
LRRK1-208ENST00000532029 CRPP02741 224 aa14.99□□□□□ -0.01
LRRK1-208ENST00000532029 RNASEKQ6P5S7 137 aaKnown RBP14.99□□□□□ -0.01
LRRK1-208ENST00000532029 UBE2WQ96B02 151 aa14.99□□□□□ -0.01
LRRK1-208ENST00000532029 RAB5AP20339 215 aa14.98□□□□□ -0.01
LRRK1-208ENST00000532029 PRSS29PA6NIE9 313 aa14.97□□□□□ -0.01
LRRK1-208ENST00000532029 FGF6P10767 208 aa14.97□□□□□ -0.01
LRRK1-208ENST00000532029 Q8N8P6 123 aa14.97□□□□□ -0.01
LRRK1-208ENST00000532029 TMEM18Q96B42 140 aa14.97□□□□□ -0.01
LRRK1-208ENST00000532029 ALKBH7Q9BT30 221 aaPredicted RBP14.97□□□□□ -0.01
LRRK1-208ENST00000532029 Q0VG73 95 aa14.96□□□□□ -0.01
LRRK1-208ENST00000532029 RMI2Q96E14 147 aa14.96□□□□□ -0.01
LRRK1-208ENST00000532029 BIRC6Q9NR09 4857 aa14.96□□□□□ -0.01
LRRK1-208ENST00000532029 DNAH2Q9P225 4427 aa14.95□□□□□ -0.02
LRRK1-208ENST00000532029 IGLV4-60A0A075B6I1 120 aa14.95□□□□□ -0.02
LRRK1-208ENST00000532029 ZNF25P17030 456 aaPredicted RBP14.95□□□□□ -0.02
LRRK1-208ENST00000532029 SMAGPQ0VAQ4 97 aa14.95□□□□□ -0.02
LRRK1-208ENST00000532029 Q6ZRN7 208 aaPredicted RBP14.95□□□□□ -0.02
LRRK1-208ENST00000532029 LINC00269Q8N2A0 174 aa14.95□□□□□ -0.02
LRRK1-208ENST00000532029 TMEM101Q96IK0 257 aa14.95□□□□□ -0.02
LRRK1-208ENST00000532029 NXT2Q9NPJ8 142 aaKnown RBP14.95□□□□□ -0.02
LRRK1-208ENST00000532029 C20orf203Q8NBC4 194 aa14.94□□□□□ -0.02
LRRK1-208ENST00000532029 TM2D2Q9BX73 214 aa14.94□□□□□ -0.02
LRRK1-208ENST00000532029 DNAH10Q8IVF4 4471 aa14.94□□□□□ -0.02
LRRK1-208ENST00000532029 PSCAO43653 123 aa14.93□□□□□ -0.02
LRRK1-208ENST00000532029 CLPSL2Q6UWE3 100 aa14.93□□□□□ -0.02
LRRK1-208ENST00000532029 DGAT2L7PQ6IED9 249 aa14.92□□□□□ -0.02
LRRK1-208ENST00000532029 ENHOQ6UWT2 76 aa14.92□□□□□ -0.02
LRRK1-208ENST00000532029 MRPL52Q86TS9 123 aaKnown RBP14.92□□□□□ -0.02
LRRK1-208ENST00000532029 OR5A1Q8NGJ0 315 aa14.92□□□□□ -0.02
LRRK1-208ENST00000532029 PRSS3P2Q8NHM4 247 aa14.92□□□□□ -0.02
LRRK1-208ENST00000532029 IGKV2D-24A0A075B6R9 120 aa14.91□□□□□ -0.02
LRRK1-208ENST00000532029 K7EMI3 77 aa14.91□□□□□ -0.02
LRRK1-208ENST00000532029 IFI27P40305 119 aaPredicted RBP14.91□□□□□ -0.02
LRRK1-208ENST00000532029 TNP2Q05952 138 aa14.91□□□□□ -0.02
LRRK1-208ENST00000532029 REG3AQ06141 175 aa14.91□□□□□ -0.02
LRRK1-208ENST00000532029 MIAQ16674 131 aa14.91□□□□□ -0.02
LRRK1-208ENST00000532029 PRR34Q9NV39 138 aa14.91□□□□□ -0.02
LRRK1-208ENST00000532029 COX11Q9Y6N1 276 aa14.91□□□□□ -0.02
LRRK1-208ENST00000532029 ORMDL2Q53FV1 153 aa14.9□□□□□ -0.02
LRRK1-208ENST00000532029 C1orf43Q9BWL3 253 aa14.9□□□□□ -0.02
LRRK1-208ENST00000532029 SCO1O75880 301 aa14.89□□□□□ -0.03
LRRK1-208ENST00000532029 UBE2D4Q9Y2X8 147 aa14.89□□□□□ -0.03
LRRK1-208ENST00000532029 S100A1P23297 94 aa14.88□□□□□ -0.03
LRRK1-208ENST00000532029 RPL39P62891 51 aaKnown RBP14.88□□□□□ -0.03
LRRK1-208ENST00000532029 TIMM21Q9BVV7 248 aa14.88□□□□□ -0.03
LRRK1-208ENST00000532029 COLCA2A8K830 154 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms