RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-220	ENST00000531733	ZNF345	Q14585	488 aa		13.19	□□□□□ -0.3
FDFT1-220	ENST00000531733	LYZL1	Q6UWQ5	148 aa		13.19	□□□□□ -0.3
FDFT1-220	ENST00000531733	NIT2	Q9NQR4	276 aa		13.19	□□□□□ -0.3
FDFT1-220	ENST00000531733	GNG13	Q9P2W3	67 aa		13.19	□□□□□ -0.3
FDFT1-220	ENST00000531733	AMT	P48728	403 aa		13.18	□□□□□ -0.3
FDFT1-220	ENST00000531733	SULT1A2	P50226	295 aa		13.18	□□□□□ -0.3
FDFT1-220	ENST00000531733	IGKV2-24	A0A0C4DH68	120 aa		13.17	□□□□□ -0.3
FDFT1-220	ENST00000531733	UBE2L6	O14933	153 aa		13.17	□□□□□ -0.3
FDFT1-220	ENST00000531733	NTF3	P20783	257 aa		13.17	□□□□□ -0.3
FDFT1-220	ENST00000531733	RPS20	P60866	119 aa	Known RBP	13.17	□□□□□ -0.3
FDFT1-220	ENST00000531733	MAJIN	Q3KP22	176 aa		13.17	□□□□□ -0.3
FDFT1-220	ENST00000531733	WDR73	Q6P4I2	378 aa		13.17	□□□□□ -0.3
FDFT1-220	ENST00000531733	TRBV20OR9-2	A0A075B6H5	130 aa		13.16	□□□□□ -0.3
FDFT1-220	ENST00000531733	BCL2L11	O43521	198 aa		13.16	□□□□□ -0.3
FDFT1-220	ENST00000531733	RPS10	P46783	165 aa	Known RBP	13.16	□□□□□ -0.3
FDFT1-220	ENST00000531733	PRR3	P79522	188 aa	Known RBP	13.16	□□□□□ -0.3
FDFT1-220	ENST00000531733	COTL1	Q14019	142 aa		13.16	□□□□□ -0.3
FDFT1-220	ENST00000531733	C7orf33	Q8WU49	177 aa		13.16	□□□□□ -0.3
FDFT1-220	ENST00000531733	GTSF1	Q8WW33	167 aa		13.16	□□□□□ -0.3
FDFT1-220	ENST00000531733	LINC01600	Q96MT4	127 aa		13.16	□□□□□ -0.3
FDFT1-220	ENST00000531733	DPH3P1	Q9H4G8	78 aa		13.16	□□□□□ -0.3
FDFT1-220	ENST00000531733	TRAV26-2	A0A0B4J265	109 aa		13.15	□□□□□ -0.3
FDFT1-220	ENST00000531733	LYPD6B	Q8NI32	183 aa		13.15	□□□□□ -0.3
FDFT1-220	ENST00000531733	BATF3	Q9NR55	127 aa		13.15	□□□□□ -0.3
FDFT1-220	ENST00000531733	NDUFS6	O75380	124 aa	Known RBP	13.14	□□□□□ -0.31
FDFT1-220	ENST00000531733	TRGC1	P0CF51	173 aa		13.14	□□□□□ -0.31
FDFT1-220	ENST00000531733	GATD1	Q8NB37	220 aa		13.14	□□□□□ -0.31
FDFT1-220	ENST00000531733	MANBAL	Q9NQG1	85 aa		13.14	□□□□□ -0.31
FDFT1-220	ENST00000531733		F2Z2F3	143 aa		13.13	□□□□□ -0.31
FDFT1-220	ENST00000531733		Q6ZNX1	250 aa		13.13	□□□□□ -0.31
FDFT1-220	ENST00000531733	STPG4	Q8N801	248 aa		13.13	□□□□□ -0.31
FDFT1-220	ENST00000531733	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.13	□□□□□ -0.31
FDFT1-220	ENST00000531733		A0A096LNI7	61 aa		13.12	□□□□□ -0.31
FDFT1-220	ENST00000531733	KANTR	A0A1W2PQU2	76 aa		13.12	□□□□□ -0.31
FDFT1-220	ENST00000531733	HMSD	A8MTL9	139 aa		13.12	□□□□□ -0.31
FDFT1-220	ENST00000531733	IFNA1	P01562	189 aa		13.12	□□□□□ -0.31
FDFT1-220	ENST00000531733	GNG4	P50150	75 aa		13.12	□□□□□ -0.31
FDFT1-220	ENST00000531733	CFAP161	Q6P656	301 aa		13.12	□□□□□ -0.31
FDFT1-220	ENST00000531733	C9orf62	Q8N4C0	152 aa		13.12	□□□□□ -0.31
FDFT1-220	ENST00000531733	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.11	□□□□□ -0.31
FDFT1-220	ENST00000531733	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.11	□□□□□ -0.31
FDFT1-220	ENST00000531733	CTRL	P40313	264 aa		13.11	□□□□□ -0.31
FDFT1-220	ENST00000531733	RPL39L	Q96EH5	51 aa	Known RBP	13.11	□□□□□ -0.31
FDFT1-220	ENST00000531733	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.1	□□□□□ -0.31
FDFT1-220	ENST00000531733	RGS21	Q2M5E4	152 aa		13.1	□□□□□ -0.31
FDFT1-220	ENST00000531733	TRAV1-1	A0A0B4J248	108 aa		13.09	□□□□□ -0.31
FDFT1-220	ENST00000531733	XKRY2	A2RUG3	117 aa		13.09	□□□□□ -0.31
FDFT1-220	ENST00000531733	FOXA3	P55318	350 aa	Predicted RBP	13.09	□□□□□ -0.31
FDFT1-220	ENST00000531733	FOXI1	Q12951	378 aa		13.09	□□□□□ -0.31
FDFT1-220	ENST00000531733	NUDT10	Q8NFP7	164 aa		13.09	□□□□□ -0.31
FDFT1-220	ENST00000531733	LINC00526	Q96FQ7	95 aa		13.09	□□□□□ -0.31
FDFT1-220	ENST00000531733	NUDT11	Q96G61	164 aa		13.09	□□□□□ -0.31
FDFT1-220	ENST00000531733		A0A0J9YXV3	536 aa		13.08	□□□□□ -0.32
FDFT1-220	ENST00000531733	KRTAP10-8	P60410	259 aa		13.08	□□□□□ -0.32
FDFT1-220	ENST00000531733	TWIST1	Q15672	202 aa		13.08	□□□□□ -0.32
FDFT1-220	ENST00000531733	SMIM12	Q96EX1	92 aa		13.08	□□□□□ -0.32
FDFT1-220	ENST00000531733	MEF2B	Q02080	365 aa	Predicted RBP	13.07	□□□□□ -0.32
FDFT1-220	ENST00000531733	AMMECR1L	Q6DCA0	310 aa		13.07	□□□□□ -0.32
FDFT1-220	ENST00000531733	RNASEK	Q6P5S7	137 aa	Known RBP	13.07	□□□□□ -0.32
FDFT1-220	ENST00000531733	CNFN	Q9BYD5	112 aa		13.07	□□□□□ -0.32
FDFT1-220	ENST00000531733	MED9	Q9NWA0	146 aa		13.07	□□□□□ -0.32
FDFT1-220	ENST00000531733	FGF6	P10767	208 aa		13.06	□□□□□ -0.32
FDFT1-220	ENST00000531733	RNASE7	Q9H1E1	156 aa	Known RBP	13.05	□□□□□ -0.32
FDFT1-220	ENST00000531733		K7EN84	100 aa		13.04	□□□□□ -0.32
FDFT1-220	ENST00000531733	XCL1	P47992	114 aa		13.04	□□□□□ -0.32
FDFT1-220	ENST00000531733	EIF5A	P63241	154 aa	Known RBP	13.04	□□□□□ -0.32
FDFT1-220	ENST00000531733	FAM231B	A6NCW3	169 aa		13.03	□□□□□ -0.32
FDFT1-220	ENST00000531733	PDE6D	O43924	150 aa		13.03	□□□□□ -0.32
FDFT1-220	ENST00000531733	APCS	P02743	223 aa		13.03	□□□□□ -0.32
FDFT1-220	ENST00000531733	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
FDFT1-220	ENST00000531733	RPP21	Q9H633	154 aa	Known RBP	13.03	□□□□□ -0.32
FDFT1-220	ENST00000531733	GAS8-AS1	O95177	125 aa		13.02	□□□□□ -0.33
FDFT1-220	ENST00000531733	NCR2	O95944	276 aa		13.02	□□□□□ -0.33
FDFT1-220	ENST00000531733	SPINK6	Q6UWN8	80 aa		13.02	□□□□□ -0.33
FDFT1-220	ENST00000531733	SDHAF1	A6NFY7	115 aa		13.01	□□□□□ -0.33
FDFT1-220	ENST00000531733	CCL25	O15444	150 aa		13.01	□□□□□ -0.33
FDFT1-220	ENST00000531733	BCL2	P10415	239 aa		13.01	□□□□□ -0.33
FDFT1-220	ENST00000531733	OR5A1	Q8NGJ0	315 aa		13.01	□□□□□ -0.33
FDFT1-220	ENST00000531733	BIN3	Q9NQY0	253 aa		13.01	□□□□□ -0.33
FDFT1-220	ENST00000531733	LPA	P08519	4548 aa		13.01	□□□□□ -0.33
FDFT1-220	ENST00000531733	LINC00959	A0A1B0GUT2	108 aa		13	□□□□□ -0.33
FDFT1-220	ENST00000531733		H7C423	109 aa		13	□□□□□ -0.33
FDFT1-220	ENST00000531733	OCC1	Q8TAD7	63 aa		13	□□□□□ -0.33
FDFT1-220	ENST00000531733	CARD19	Q96LW7	228 aa		12.99	□□□□□ -0.33
FDFT1-220	ENST00000531733	IGHV1-58	A0A0C4DH39	117 aa		12.97	□□□□□ -0.33
FDFT1-220	ENST00000531733	TSHB	P01222	138 aa		12.97	□□□□□ -0.33
FDFT1-220	ENST00000531733	ESD	P10768	282 aa		12.97	□□□□□ -0.33
FDFT1-220	ENST00000531733	REG3G	Q6UW15	175 aa		12.97	□□□□□ -0.33
FDFT1-220	ENST00000531733	LINC00474	Q9P2X8	69 aa		12.97	□□□□□ -0.33
FDFT1-220	ENST00000531733	TEX46	H3BTG2	121 aa		12.96	□□□□□ -0.33
FDFT1-220	ENST00000531733	ZNF25	P17030	456 aa	Predicted RBP	12.96	□□□□□ -0.33
FDFT1-220	ENST00000531733		Q6ZRP5	223 aa		12.96	□□□□□ -0.33
FDFT1-220	ENST00000531733		I3L3M4	83 aa		12.95	□□□□□ -0.34
FDFT1-220	ENST00000531733	PMCH	P20382	165 aa		12.95	□□□□□ -0.34
FDFT1-220	ENST00000531733	TMEM242	Q9NWH2	141 aa		12.95	□□□□□ -0.34
FDFT1-220	ENST00000531733	TRBV6-5	A0A0K0K1A5	114 aa		12.94	□□□□□ -0.34
FDFT1-220	ENST00000531733	SYCN	Q0VAF6	134 aa		12.94	□□□□□ -0.34
FDFT1-220	ENST00000531733	TMEM101	Q96IK0	257 aa		12.94	□□□□□ -0.34
FDFT1-220	ENST00000531733		A0A1W2PNN7	141 aa		12.93	□□□□□ -0.34
FDFT1-220	ENST00000531733	PTTG1IP	P53801	180 aa		12.93	□□□□□ -0.34

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