RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 C20orf203Q8NBC4 194 aa7.08□□□□□ -1.28
FGFR1-236ENST00000531196 PGLYRP4Q96LB8 373 aa7.08□□□□□ -1.28
FGFR1-236ENST00000531196 TRAV8-4A0A0B4J246 113 aa7.07□□□□□ -1.28
FGFR1-236ENST00000531196 AMMECR1LQ6DCA0 310 aa7.07□□□□□ -1.28
FGFR1-236ENST00000531196 CLRN3Q8NCR9 226 aa7.07□□□□□ -1.28
FGFR1-236ENST00000531196 AP5S1Q9NUS5 200 aa7.07□□□□□ -1.28
FGFR1-236ENST00000531196 IGLV4-60A0A075B6I1 120 aa7.06□□□□□ -1.28
FGFR1-236ENST00000531196 TRAV26-2A0A0B4J265 109 aa7.06□□□□□ -1.28
FGFR1-236ENST00000531196 IGKV3OR2-268A0A0C4DH90 116 aa7.06□□□□□ -1.28
FGFR1-236ENST00000531196 A0A1B0GUV1 79 aa7.06□□□□□ -1.28
FGFR1-236ENST00000531196 K7EN84 100 aa7.06□□□□□ -1.28
FGFR1-236ENST00000531196 BLOC1S1P78537 153 aa7.06□□□□□ -1.28
FGFR1-236ENST00000531196 ALKAL2Q6UX46 152 aa7.06□□□□□ -1.28
FGFR1-236ENST00000531196 OCC1Q8TAD7 63 aa7.06□□□□□ -1.28
FGFR1-236ENST00000531196 BORCS7Q96B45 105 aa7.06□□□□□ -1.28
FGFR1-236ENST00000531196 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.05□□□□□ -1.28
FGFR1-236ENST00000531196 KRTAP29-1A8MX34 341 aaPredicted RBP7.05□□□□□ -1.28
FGFR1-236ENST00000531196 TMEM250H0YL14 139 aa7.05□□□□□ -1.28
FGFR1-236ENST00000531196 GATCO43716 136 aaKnown RBP7.05□□□□□ -1.28
FGFR1-236ENST00000531196 APCSP02743 223 aa7.05□□□□□ -1.28
FGFR1-236ENST00000531196 RPL37AP61513 92 aaKnown RBP7.05□□□□□ -1.28
FGFR1-236ENST00000531196 KRTAP26-1Q6PEX3 210 aa7.05□□□□□ -1.28
FGFR1-236ENST00000531196 C9orf163Q8N9P6 203 aa7.05□□□□□ -1.28
FGFR1-236ENST00000531196 GATD1Q8NB37 220 aa7.05□□□□□ -1.28
FGFR1-236ENST00000531196 CNFNQ9BYD5 112 aa7.05□□□□□ -1.28
FGFR1-236ENST00000531196 GFRA4Q9GZZ7 299 aa7.05□□□□□ -1.28
FGFR1-236ENST00000531196 RNASEKQ6P5S7 137 aaKnown RBP7.04□□□□□ -1.28
FGFR1-236ENST00000531196 TEX261Q6UWH6 196 aa7.04□□□□□ -1.28
FGFR1-236ENST00000531196 GTSF1Q8WW33 167 aa7.04□□□□□ -1.28
FGFR1-236ENST00000531196 RPL39LQ96EH5 51 aaKnown RBP7.04□□□□□ -1.28
FGFR1-236ENST00000531196 IGHV3-64A0A075B6Q5 118 aa7.03□□□□□ -1.28
FGFR1-236ENST00000531196 A0A1B0GVG6 124 aa7.03□□□□□ -1.28
FGFR1-236ENST00000531196 GAGE12HA6NDE8 117 aa7.03□□□□□ -1.28
FGFR1-236ENST00000531196 A8MWL6 223 aa7.03□□□□□ -1.28
FGFR1-236ENST00000531196 NCR2O95944 276 aa7.03□□□□□ -1.28
FGFR1-236ENST00000531196 CNBPP62633 177 aaKnown RBP7.03□□□□□ -1.28
FGFR1-236ENST00000531196 DPH3Q96FX2 82 aa7.03□□□□□ -1.28
FGFR1-236ENST00000531196 EIF5A2Q9GZV4 153 aaKnown RBP7.03□□□□□ -1.28
FGFR1-236ENST00000531196 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.03□□□□□ -1.28
FGFR1-236ENST00000531196 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.02□□□□□ -1.29
FGFR1-236ENST00000531196 IGKV2-29A2NJV5 120 aaPredicted RBP7.02□□□□□ -1.29
FGFR1-236ENST00000531196 SDHAF1A6NFY7 115 aa7.02□□□□□ -1.29
FGFR1-236ENST00000531196 CFAP161Q6P656 301 aa7.02□□□□□ -1.29
FGFR1-236ENST00000531196 FAM231DQ6ZW35 169 aa7.02□□□□□ -1.29
FGFR1-236ENST00000531196 SMIM7Q9BQ49 75 aa7.02□□□□□ -1.29
FGFR1-236ENST00000531196 FGF6P10767 208 aa7.01□□□□□ -1.29
FGFR1-236ENST00000531196 PMCHP20382 165 aa7.01□□□□□ -1.29
FGFR1-236ENST00000531196 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
FGFR1-236ENST00000531196 KRTAP10-4P60372 401 aaPredicted RBP7.01□□□□□ -1.29
FGFR1-236ENST00000531196 CT83Q5H943 113 aa7.01□□□□□ -1.29
FGFR1-236ENST00000531196 SDIM1Q6ZPB5 146 aa7.01□□□□□ -1.29
FGFR1-236ENST00000531196 TMEM101Q96IK0 257 aa7.01□□□□□ -1.29
FGFR1-236ENST00000531196 BTF3L4Q96K17 158 aa7.01□□□□□ -1.29
FGFR1-236ENST00000531196 H7C423 109 aa7□□□□□ -1.29
FGFR1-236ENST00000531196 PANO1I0J062 215 aa7□□□□□ -1.29
FGFR1-236ENST00000531196 I3L3M4 83 aa7□□□□□ -1.29
FGFR1-236ENST00000531196 HIGD2BQ4VC39 106 aa7□□□□□ -1.29
FGFR1-236ENST00000531196 CHCHD10Q8WYQ3 142 aaPredicted RBP7□□□□□ -1.29
FGFR1-236ENST00000531196 A0A1B0GUT8 65 aa6.99□□□□□ -1.29
FGFR1-236ENST00000531196 ZNF727A8MUV8 499 aa6.99□□□□□ -1.29
FGFR1-236ENST00000531196 HIGD1CA8MV81 97 aa6.99□□□□□ -1.29
FGFR1-236ENST00000531196 OXTP01178 125 aa6.99□□□□□ -1.29
FGFR1-236ENST00000531196 C15orf56Q8N910 161 aa6.99□□□□□ -1.29
FGFR1-236ENST00000531196 OR5A1Q8NGJ0 315 aa6.99□□□□□ -1.29
FGFR1-236ENST00000531196 TSKUQ8WUA8 353 aa6.99□□□□□ -1.29
FGFR1-236ENST00000531196 MRAP2Q96G30 205 aa6.99□□□□□ -1.29
FGFR1-236ENST00000531196 ST20Q9HBF5 79 aa6.99□□□□□ -1.29
FGFR1-236ENST00000531196 CHTF8P0CG12 524 aa6.98□□□□□ -1.29
FGFR1-236ENST00000531196 ZNF25P17030 456 aaPredicted RBP6.98□□□□□ -1.29
FGFR1-236ENST00000531196 LINC01551Q86U37 167 aa6.98□□□□□ -1.29
FGFR1-236ENST00000531196 TMEM242Q9NWH2 141 aa6.98□□□□□ -1.29
FGFR1-236ENST00000531196 TRBV6-5A0A0K0K1A5 114 aa6.97□□□□□ -1.29
FGFR1-236ENST00000531196 RPS10P46783 165 aaKnown RBP6.97□□□□□ -1.29
FGFR1-236ENST00000531196 XCL1P47992 114 aa6.97□□□□□ -1.29
FGFR1-236ENST00000531196 CIRBPQ14011 172 aaKnown RBP6.97□□□□□ -1.29
FGFR1-236ENST00000531196 LYPD6BQ8NI32 183 aa6.97□□□□□ -1.29
FGFR1-236ENST00000531196 RNF185Q96GF1 192 aa6.97□□□□□ -1.29
FGFR1-236ENST00000531196 FAM210AQ96ND0 272 aa6.97□□□□□ -1.29
FGFR1-236ENST00000531196 A0A087WYN8 130 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 IGKV2-24A0A0C4DH68 120 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 SLPIP03973 132 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 FCER1GP30273 86 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 COX6A2Q02221 97 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 RIGQ13278 110 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 SERTAD4-AS1Q5TG53 156 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 AMN1Q8IY45 258 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 SPACA4Q8TDM5 124 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 C7orf33Q8WU49 177 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 TMEM191AQ9H0A3 160 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 OSTCQ9NRP0 149 aa6.96□□□□□ -1.3
FGFR1-236ENST00000531196 LRP1Q07954 4544 aaKnown RBP6.95□□□□□ -1.3
FGFR1-236ENST00000531196 GVQW2A0A096LPI5 108 aaPredicted RBP6.95□□□□□ -1.3
FGFR1-236ENST00000531196 C7orf77A4D0Y5 90 aa6.95□□□□□ -1.3
FGFR1-236ENST00000531196 FAM231BA6NCW3 169 aa6.95□□□□□ -1.3
FGFR1-236ENST00000531196 CCL25O15444 150 aa6.95□□□□□ -1.3
FGFR1-236ENST00000531196 NDUFS6O75380 124 aaKnown RBP6.95□□□□□ -1.3
FGFR1-236ENST00000531196 GAS8-AS1O95177 125 aa6.95□□□□□ -1.3
FGFR1-236ENST00000531196 TSHBP01222 138 aa6.95□□□□□ -1.3
FGFR1-236ENST00000531196 SRP19P09132 144 aaKnown RBP6.95□□□□□ -1.3
FGFR1-236ENST00000531196 HNRNPA3P51991 378 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms