RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 TMSB15BA0A087X1C1 80 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 A0A096LPF7 62 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 TRBV7-9A0A0J9YWB2 115 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 GAGE12BA1L429 117 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 PRAC2D3DTV9 90 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 D6R8Y8 96 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 H3BNG1 76 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 GAGE7O76087 117 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 HBDP02042 147 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 GAGE12FP0CL80 117 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 GAGE12GP0CL81 117 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 GAGE12IP0CL82 117 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 DNAH10OSP0CZ25 163 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 AMN1Q8IY45 258 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 ATOH7Q8N100 152 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 PLA2G2DQ9UNK4 145 aa6.28□□□□□ -1.4
CHMP4A-205ENST00000531158 RNF213Q63HN8 5207 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 DNAH8Q96JB1 4490 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 A0A096LNJ9 63 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 SNAI2O43623 268 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 ORM1P02763 201 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 CACNG7P62955 275 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 TWIST1Q15672 202 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 Q6ZTI0 123 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 LINC00173Q6ZV60 143 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 PMCHL2Q9BQD1 86 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 MAP1LC3AQ9H492 121 aa6.27□□□□□ -1.41
CHMP4A-205ENST00000531158 CKS2P33552 79 aa6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 HAMPP81172 84 aa6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 MAJINQ3KP22 176 aa6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 SLC25A34Q6PIV7 304 aa6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 C11orf72Q8NBR9 251 aa6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 OR10J6PQ8NGY7 276 aa6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 RNF185Q96GF1 192 aa6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 AGPAT4-IT1Q9H0P7 198 aa6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 NXT2Q9NPJ8 142 aaKnown RBP6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 MDFICQ9P1T7 246 aa6.26□□□□□ -1.41
CHMP4A-205ENST00000531158 PRSS47A8MTI9 375 aa6.25□□□□□ -1.41
CHMP4A-205ENST00000531158 DLEU1O43261 78 aa6.25□□□□□ -1.41
CHMP4A-205ENST00000531158 NPYP01303 97 aa6.25□□□□□ -1.41
CHMP4A-205ENST00000531158 SMR3BP02814 79 aaPredicted RBP6.25□□□□□ -1.41
CHMP4A-205ENST00000531158 IFI27P40305 119 aaPredicted RBP6.25□□□□□ -1.41
CHMP4A-205ENST00000531158 ERCC8Q13216 396 aa6.25□□□□□ -1.41
CHMP4A-205ENST00000531158 SMIM15Q7Z3B0 74 aa6.25□□□□□ -1.41
CHMP4A-205ENST00000531158 LINC00477Q96M19 166 aa6.25□□□□□ -1.41
CHMP4A-205ENST00000531158 PGPEP1Q9NXJ5 209 aa6.25□□□□□ -1.41
CHMP4A-205ENST00000531158 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
CHMP4A-205ENST00000531158 A0A087WTM6 91 aa6.24□□□□□ -1.41
CHMP4A-205ENST00000531158 IGKV3D-20A0A0C4DH25 116 aa6.24□□□□□ -1.41
CHMP4A-205ENST00000531158 J3KRW8 73 aa6.24□□□□□ -1.41
CHMP4A-205ENST00000531158 SIVA1O15304 175 aa6.24□□□□□ -1.41
CHMP4A-205ENST00000531158 ZNF25P17030 456 aaPredicted RBP6.24□□□□□ -1.41
CHMP4A-205ENST00000531158 DAZ2Q13117 558 aaKnown RBP6.24□□□□□ -1.41
CHMP4A-205ENST00000531158 BATFQ16520 125 aa6.24□□□□□ -1.41
CHMP4A-205ENST00000531158 TRAV12-3A0A0B4J271 114 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 TRAV21A0A0B4J279 112 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 NXPH4O95158 308 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 COX8AP10176 69 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 Q8N8P6 123 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 ORAOV1Q8WV07 137 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 IFI27L1Q96BM0 104 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 MRAP2Q96G30 205 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 FAM19A4Q96LR4 140 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 C11orf21Q9P2W6 132 aa6.23□□□□□ -1.41
CHMP4A-205ENST00000531158 K7EMI3 77 aa6.22□□□□□ -1.41
CHMP4A-205ENST00000531158 TNFRSF6BO95407 300 aa6.22□□□□□ -1.41
CHMP4A-205ENST00000531158 NCR2O95944 276 aa6.22□□□□□ -1.41
CHMP4A-205ENST00000531158 FCER1GP30273 86 aa6.22□□□□□ -1.41
CHMP4A-205ENST00000531158 Q6ZQT7 251 aa6.22□□□□□ -1.41
CHMP4A-205ENST00000531158 ZFAND2AQ8N6M9 145 aa6.22□□□□□ -1.41
CHMP4A-205ENST00000531158 STPG4Q8N801 248 aa6.22□□□□□ -1.41
CHMP4A-205ENST00000531158 LOC389332A0A1B0GUA5 103 aa6.21□□□□□ -1.42
CHMP4A-205ENST00000531158 SMKR1H3BMG3 65 aa6.21□□□□□ -1.42
CHMP4A-205ENST00000531158 M0R381 172 aa6.21□□□□□ -1.42
CHMP4A-205ENST00000531158 ASIPP42127 132 aa6.21□□□□□ -1.42
CHMP4A-205ENST00000531158 HINT1P49773 126 aaPredicted RBP6.21□□□□□ -1.42
CHMP4A-205ENST00000531158 PRR9Q5T870 116 aa6.21□□□□□ -1.42
CHMP4A-205ENST00000531158 ODF3Q96PU9 254 aa6.21□□□□□ -1.42
CHMP4A-205ENST00000531158 MSRB1Q9NZV6 116 aa6.21□□□□□ -1.42
CHMP4A-205ENST00000531158 MUC21A0A0G2JKD1 596 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 MUC21A0A140T8X8 626 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 KLLNB2CW77 178 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 ATP5LO75964 103 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 G0S2P27469 103 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 MUC21Q5SSG8 566 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 SPANXN1Q5VSR9 72 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 LYPD5Q6UWN5 251 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 WFDC10BQ8IUB3 73 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 NRACQ8N912 160 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 COX11Q9Y6N1 276 aa6.2□□□□□ -1.42
CHMP4A-205ENST00000531158 TRGV2A0A075B6R0 118 aa6.19□□□□□ -1.42
CHMP4A-205ENST00000531158 TRGV1A0A0A0MS02 117 aa6.19□□□□□ -1.42
CHMP4A-205ENST00000531158 KRTAP29-1A8MX34 341 aaPredicted RBP6.19□□□□□ -1.42
CHMP4A-205ENST00000531158 H0Y8G0 127 aa6.19□□□□□ -1.42
CHMP4A-205ENST00000531158 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
CHMP4A-205ENST00000531158 H3BVH4 76 aa6.19□□□□□ -1.42
CHMP4A-205ENST00000531158 PPP1R17O96001 155 aa6.19□□□□□ -1.42
CHMP4A-205ENST00000531158 IGHV3-53P01767 116 aa6.19□□□□□ -1.42
CHMP4A-205ENST00000531158 FGF6P10767 208 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms