RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 GATD1Q8NB37 220 aa12.56□□□□□ -0.4
UBXN1-211ENST00000531056 IGKV2D-24A0A075B6R9 120 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 IGLV5-52A0A0A0MRZ9 124 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 TRAV26-2A0A0B4J265 109 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 IGHV1-24A0A0C4DH33 117 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 GCSHP23434 173 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 Q0VG73 95 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 RIGQ13278 110 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 ENHOQ6UWT2 76 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 SLC7A5P1Q8MH63 180 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 Q8N976 141 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 FRZBQ92765 325 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 CTDSP1Q9GZU7 261 aa12.55□□□□□ -0.4
UBXN1-211ENST00000531056 GAGE6Q13070 117 aa12.54□□□□□ -0.4
UBXN1-211ENST00000531056 LECT2O14960 151 aa12.53□□□□□ -0.4
UBXN1-211ENST00000531056 APOC3P02656 99 aa12.53□□□□□ -0.4
UBXN1-211ENST00000531056 ANGP03950 147 aaKnown RBP12.53□□□□□ -0.4
UBXN1-211ENST00000531056 RBX1P62877 108 aa12.53□□□□□ -0.4
UBXN1-211ENST00000531056 RHEBQ15382 184 aa12.53□□□□□ -0.4
UBXN1-211ENST00000531056 CLRN3Q8NCR9 226 aa12.53□□□□□ -0.4
UBXN1-211ENST00000531056 BAALCQ8WXS3 180 aa12.53□□□□□ -0.4
UBXN1-211ENST00000531056 PCLOQ9Y6V0 5065 aa12.53□□□□□ -0.4
UBXN1-211ENST00000531056 CRPP02741 224 aa12.52□□□□□ -0.41
UBXN1-211ENST00000531056 XGP55808 180 aa12.52□□□□□ -0.41
UBXN1-211ENST00000531056 Q8N1X5 172 aa12.52□□□□□ -0.41
UBXN1-211ENST00000531056 SVBPQ8N300 66 aa12.52□□□□□ -0.41
UBXN1-211ENST00000531056 A0A1B0GW15 77 aa12.51□□□□□ -0.41
UBXN1-211ENST00000531056 C7orf77A4D0Y5 90 aa12.51□□□□□ -0.41
UBXN1-211ENST00000531056 SNAPINO95295 136 aa12.51□□□□□ -0.41
UBXN1-211ENST00000531056 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
UBXN1-211ENST00000531056 IMMP2LQ96T52 175 aa12.51□□□□□ -0.41
UBXN1-211ENST00000531056 TMEM243Q9BU79 118 aa12.51□□□□□ -0.41
UBXN1-211ENST00000531056 PRR34Q9NV39 138 aa12.51□□□□□ -0.41
UBXN1-211ENST00000531056 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
UBXN1-211ENST00000531056 C1orf43Q9BWL3 253 aa12.5□□□□□ -0.41
UBXN1-211ENST00000531056 TMEM242Q9NWH2 141 aa12.5□□□□□ -0.41
UBXN1-211ENST00000531056 S100A8P05109 93 aa12.49□□□□□ -0.41
UBXN1-211ENST00000531056 COTL1Q14019 142 aa12.49□□□□□ -0.41
UBXN1-211ENST00000531056 MIAQ16674 131 aa12.49□□□□□ -0.41
UBXN1-211ENST00000531056 TMEM191AQ9H0A3 160 aa12.49□□□□□ -0.41
UBXN1-211ENST00000531056 RPS10P5Q9NQ39 176 aa12.49□□□□□ -0.41
UBXN1-211ENST00000531056 MRPL54Q6P161 138 aaKnown RBP12.48□□□□□ -0.41
UBXN1-211ENST00000531056 ATP5L2Q7Z4Y8 100 aa12.48□□□□□ -0.41
UBXN1-211ENST00000531056 LINC00269Q8N2A0 174 aa12.48□□□□□ -0.41
UBXN1-211ENST00000531056 ABCA13Q86UQ4 5058 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 A0A1B0GUV1 79 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 S100PP25815 95 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 AMTP48728 403 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 CAMPP49913 170 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 HBBP68871 147 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 CLPSL2Q6UWE3 100 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 C20orf203Q8NBC4 194 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 BTF3L4Q96K17 158 aa12.47□□□□□ -0.41
UBXN1-211ENST00000531056 IGLV4-60A0A075B6I1 120 aa12.46□□□□□ -0.41
UBXN1-211ENST00000531056 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.46□□□□□ -0.41
UBXN1-211ENST00000531056 GAS8-AS1O95177 125 aa12.46□□□□□ -0.41
UBXN1-211ENST00000531056 KRTAP26-1Q6PEX3 210 aa12.46□□□□□ -0.41
UBXN1-211ENST00000531056 TMEM70Q9BUB7 260 aa12.46□□□□□ -0.41
UBXN1-211ENST00000531056 TRAV9-1A0A075B6T8 112 aa12.45□□□□□ -0.42
UBXN1-211ENST00000531056 TRBV6-5A0A0K0K1A5 114 aa12.45□□□□□ -0.42
UBXN1-211ENST00000531056 A0A1B0GXF2 115 aa12.45□□□□□ -0.42
UBXN1-211ENST00000531056 SDHAF1A6NFY7 115 aa12.45□□□□□ -0.42
UBXN1-211ENST00000531056 NCR2O95944 276 aa12.44□□□□□ -0.42
UBXN1-211ENST00000531056 RAB4AP20338 218 aa12.44□□□□□ -0.42
UBXN1-211ENST00000531056 REG3AQ06141 175 aa12.44□□□□□ -0.42
UBXN1-211ENST00000531056 UBE2L6O14933 153 aa12.43□□□□□ -0.42
UBXN1-211ENST00000531056 HLA-DQA1P01909 254 aa12.43□□□□□ -0.42
UBXN1-211ENST00000531056 AMN1Q8IY45 258 aa12.43□□□□□ -0.42
UBXN1-211ENST00000531056 FAM30AQ9NZY2 134 aa12.43□□□□□ -0.42
UBXN1-211ENST00000531056 DNAH8Q96JB1 4490 aa12.43□□□□□ -0.42
UBXN1-211ENST00000531056 RPS10P46783 165 aaKnown RBP12.42□□□□□ -0.42
UBXN1-211ENST00000531056 MRAP2Q96G30 205 aa12.42□□□□□ -0.42
UBXN1-211ENST00000531056 APCSP02743 223 aa12.41□□□□□ -0.42
UBXN1-211ENST00000531056 HAMPP81172 84 aa12.41□□□□□ -0.42
UBXN1-211ENST00000531056 FAM104BQ5XKR9 115 aa12.41□□□□□ -0.42
UBXN1-211ENST00000531056 USP17L23D6RBM5 183 aa12.4□□□□□ -0.42
UBXN1-211ENST00000531056 I3L3M4 83 aa12.4□□□□□ -0.42
UBXN1-211ENST00000531056 C14orf177Q52M58 125 aa12.4□□□□□ -0.42
UBXN1-211ENST00000531056 Q6ZSA8 131 aa12.4□□□□□ -0.42
UBXN1-211ENST00000531056 ST20Q9HBF5 79 aa12.4□□□□□ -0.42
UBXN1-211ENST00000531056 IGLV10-54A0A075B6I4 117 aa12.39□□□□□ -0.43
UBXN1-211ENST00000531056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.39□□□□□ -0.43
UBXN1-211ENST00000531056 IGKV2-29A2NJV5 120 aaPredicted RBP12.39□□□□□ -0.43
UBXN1-211ENST00000531056 H7C423 109 aa12.39□□□□□ -0.43
UBXN1-211ENST00000531056 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
UBXN1-211ENST00000531056 TRAV8-4A0A0B4J246 113 aa12.38□□□□□ -0.43
UBXN1-211ENST00000531056 SMKR1H3BMG3 65 aa12.38□□□□□ -0.43
UBXN1-211ENST00000531056 TSHBP01222 138 aa12.38□□□□□ -0.43
UBXN1-211ENST00000531056 PMCHP20382 165 aa12.38□□□□□ -0.43
UBXN1-211ENST00000531056 LINC01620Q4KN68 170 aa12.38□□□□□ -0.43
UBXN1-211ENST00000531056 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
UBXN1-211ENST00000531056 PPP1R17O96001 155 aa12.37□□□□□ -0.43
UBXN1-211ENST00000531056 MRPL51Q4U2R6 128 aaKnown RBP12.37□□□□□ -0.43
UBXN1-211ENST00000531056 NRACQ8N912 160 aa12.37□□□□□ -0.43
UBXN1-211ENST00000531056 EPM2AB3EWF7 344 aa12.36□□□□□ -0.43
UBXN1-211ENST00000531056 PRSS1P07477 247 aa12.36□□□□□ -0.43
UBXN1-211ENST00000531056 ESDP10768 282 aa12.36□□□□□ -0.43
UBXN1-211ENST00000531056 CKS2P33552 79 aa12.36□□□□□ -0.43
UBXN1-211ENST00000531056 COX19Q49B96 90 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms