RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 GTSCR1Q86UQ5 136 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 PCP2Q8IVA1 136 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 RNASE8Q8TDE3 154 aaKnown RBP4.03□□□□□ -1.76
PCF11-205ENST00000530906 C16orf74Q96GX8 76 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 SELENOKQ9Y6D0 94 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 FLNAP21333 2647 aaKnown RBP4.03□□□□□ -1.76
PCF11-205ENST00000530906 AGRNO00468 2067 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 MXRA5Q9NR99 2828 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 ZANQ9Y493 2812 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 IGLV4-69A0A075B6H9 119 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 IGKV2D-26A0A0A0MRZ7 120 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 TRAV4A0A0B4J268 109 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 SPRY2O43597 315 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 SMIM13P0DJ93 91 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 PTTG1IPP53801 180 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 MRPS36P82909 103 aaKnown RBP4.02□□□□□ -1.77
PCF11-205ENST00000530906 COTL1Q14019 142 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 VAMP3Q15836 100 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 CEND1Q8N111 149 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 PLEKHB2Q96CS7 222 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 PRADC1Q9BSG0 188 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 VCX2Q9H322 139 aa4.02□□□□□ -1.77
PCF11-205ENST00000530906 CCDC168Q8NDH2 2452 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 TRAV8-6A0A0B4J262 113 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 H7C423 109 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 P0DMU3 169 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 FAM231AP0DMU4 169 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 FAM231CP0DMU5 169 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 RPL36AP83881 106 aaKnown RBP4.01□□□□□ -1.77
PCF11-205ENST00000530906 NEGR1Q7Z3B1 354 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 DAZ4Q86SG3 579 aaKnown RBP4.01□□□□□ -1.77
PCF11-205ENST00000530906 C1orf158Q8N1D5 194 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 OR4C5Q8NGB2 326 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 OR5A1Q8NGJ0 315 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 RPL36ALQ969Q0 106 aaKnown RBP4.01□□□□□ -1.77
PCF11-205ENST00000530906 AMELXQ99217 191 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 DAZ3Q9NR90 486 aaKnown RBP4.01□□□□□ -1.77
PCF11-205ENST00000530906 SPANXB1Q9NS25 103 aaPredicted RBP4.01□□□□□ -1.77
PCF11-205ENST00000530906 XCL2Q9UBD3 114 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 TP73-AS1Q9UF72 201 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 CSDC2Q9Y534 153 aaKnown RBP4.01□□□□□ -1.77
PCF11-205ENST00000530906 CHD6Q8TD26 2715 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 TLN2Q9Y4G6 2542 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 UNC79Q9P2D8 2635 aa4.01□□□□□ -1.77
PCF11-205ENST00000530906 HIVEP2P31629 2446 aa4□□□□□ -1.77
PCF11-205ENST00000530906 IGLV4-3A0A075B6K6 122 aa4□□□□□ -1.77
PCF11-205ENST00000530906 TRBV7-3A0A075B6L6 115 aa4□□□□□ -1.77
PCF11-205ENST00000530906 A0A1B0GWB2 263 aa4□□□□□ -1.77
PCF11-205ENST00000530906 SMIM9A6NGZ8 99 aa4□□□□□ -1.77
PCF11-205ENST00000530906 ZNF815PA8K554 130 aa4□□□□□ -1.77
PCF11-205ENST00000530906 LEPROTO15243 131 aa4□□□□□ -1.77
PCF11-205ENST00000530906 LY6G6DO95868 133 aa4□□□□□ -1.77
PCF11-205ENST00000530906 FABP2P12104 132 aa4□□□□□ -1.77
PCF11-205ENST00000530906 HTN1P15515 57 aa4□□□□□ -1.77
PCF11-205ENST00000530906 AZU1P20160 251 aa4□□□□□ -1.77
PCF11-205ENST00000530906 GCSHP23434 173 aa4□□□□□ -1.77
PCF11-205ENST00000530906 RPL39P62891 51 aaKnown RBP4□□□□□ -1.77
PCF11-205ENST00000530906 RRN3P1Q2M238 152 aa4□□□□□ -1.77
PCF11-205ENST00000530906 GAGE13Q4V321 117 aa4□□□□□ -1.77
PCF11-205ENST00000530906 C9orf66Q5T8R8 295 aa4□□□□□ -1.77
PCF11-205ENST00000530906 LYRM7Q5U5X0 104 aa4□□□□□ -1.77
PCF11-205ENST00000530906 HIST2H2BCQ6DN03 193 aa4□□□□□ -1.77
PCF11-205ENST00000530906 SCGB1D4Q6XE38 83 aa4□□□□□ -1.77
PCF11-205ENST00000530906 NTN5Q8WTR8 489 aaPredicted RBP4□□□□□ -1.77
PCF11-205ENST00000530906 HIST1H4GQ99525 98 aa4□□□□□ -1.77
PCF11-205ENST00000530906 OVOL2Q9BRP0 275 aa4□□□□□ -1.77
PCF11-205ENST00000530906 CELSR1Q9NYQ6 3014 aa4□□□□□ -1.77
PCF11-205ENST00000530906 SORL1Q92673 2214 aa4□□□□□ -1.77
PCF11-205ENST00000530906 PDZD2O15018 2839 aa4□□□□□ -1.77
PCF11-205ENST00000530906 MAP1AP78559 2803 aaPredicted RBP3.99□□□□□ -1.77
PCF11-205ENST00000530906 NACAE9PAV3 2078 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 SONP18583 2426 aaKnown RBP3.99□□□□□ -1.77
PCF11-205ENST00000530906 TRGV1A0A0A0MS02 117 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 TINCRA0A1B0GVN0 87 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 TRBV6-4A0A1B0GX49 114 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 TMEM223A0PJW6 202 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 J3QQQ9 107 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 K7EP13 123 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 K7EQD1 137 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 CCL25O15444 150 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 LGALS3P17931 250 aaKnown RBP3.99□□□□□ -1.77
PCF11-205ENST00000530906 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 Q6ZVH6 145 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 FAM19A3Q7Z5A8 133 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 PRIMA1Q86XR5 153 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 C11orf44Q8N8P7 122 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 CSNK1G2-AS1Q8NCQ2 148 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 CHCHD7Q9BUK0 85 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 GTSF1LQ9H1H1 148 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 MRPL16Q9NX20 251 aaKnown RBP3.99□□□□□ -1.77
PCF11-205ENST00000530906 UBE2D4Q9Y2X8 147 aa3.99□□□□□ -1.77
PCF11-205ENST00000530906 HELZ2Q9BYK8 2649 aaKnown RBP3.99□□□□□ -1.77
PCF11-205ENST00000530906 TENM4Q6N022 2769 aa3.98□□□□□ -1.77
PCF11-205ENST00000530906 IGLV5-45A0A087WSX0 123 aa3.98□□□□□ -1.77
PCF11-205ENST00000530906 A0A1W2PPM0 123 aa3.98□□□□□ -1.77
PCF11-205ENST00000530906 GAGE10A6NGK3 116 aa3.98□□□□□ -1.77
PCF11-205ENST00000530906 TMEM238C9JI98 176 aa3.98□□□□□ -1.77
PCF11-205ENST00000530906 K7EP34 96 aa3.98□□□□□ -1.77
PCF11-205ENST00000530906 GIG44P09565 113 aaPredicted RBP3.98□□□□□ -1.77
PCF11-205ENST00000530906 ZNF22P17026 224 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms