RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 LY6G6DO95868 133 aa6.32□□□□□ -1.4
CTNND1-227ENST00000530748 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
CTNND1-227ENST00000530748 J3KT08 172 aa6.32□□□□□ -1.4
CTNND1-227ENST00000530748 M0QY20 66 aa6.32□□□□□ -1.4
CTNND1-227ENST00000530748 CEP290O15078 2479 aa6.32□□□□□ -1.4
CTNND1-227ENST00000530748 IBA57-AS1B1ANH7 110 aa6.32□□□□□ -1.4
CTNND1-227ENST00000530748 LY6G6CO95867 125 aa6.32□□□□□ -1.4
CTNND1-227ENST00000530748 ZNF22P17026 224 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-227ENST00000530748 Q8N6K4 173 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 DOPEY2Q9Y3R5 2298 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 PRB2P02812 416 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-227ENST00000530748 CRIP1P50238 77 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 FAM110AQ9BQ89 295 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 EML6Q6ZMW3 1958 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 K7ERS5 55 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 MBD6Q96DN6 1003 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 DOCK8Q8NF50 2099 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 TRAV10A0A0B4J240 114 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
CTNND1-227ENST00000530748 LINC00643Q86TS7 51 aa6.31□□□□□ -1.4
CTNND1-227ENST00000530748 LINC00482Q8N8I6 264 aa6.3□□□□□ -1.4
CTNND1-227ENST00000530748 BPY2O14599 106 aa6.3□□□□□ -1.4
CTNND1-227ENST00000530748 ALPK3Q96L96 1907 aa6.3□□□□□ -1.4
CTNND1-227ENST00000530748 LINC00308Q8TCZ7 52 aa6.3□□□□□ -1.4
CTNND1-227ENST00000530748 FAM19A5Q7Z5A7 132 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-227ENST00000530748 C10orf99Q6UWK7 81 aa6.29□□□□□ -1.4
CTNND1-227ENST00000530748 SDK2Q58EX2 2172 aa6.29□□□□□ -1.4
CTNND1-227ENST00000530748 IGLV2-11P01706 119 aa6.29□□□□□ -1.4
CTNND1-227ENST00000530748 CDKN2A-AS1Q9UH64 79 aa6.29□□□□□ -1.4
CTNND1-227ENST00000530748 PYGO1Q9Y3Y4 419 aa6.29□□□□□ -1.4
CTNND1-227ENST00000530748 KIAA2026Q5HYC2 2103 aa6.29□□□□□ -1.4
CTNND1-227ENST00000530748 DYSFO75923 2080 aa6.29□□□□□ -1.4
CTNND1-227ENST00000530748 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
CTNND1-227ENST00000530748 HIGD2AQ9BW72 106 aa6.29□□□□□ -1.4
CTNND1-227ENST00000530748 PROK1P58294 105 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 A0A087WZ39 114 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 TRBV6-5A0A0K0K1A5 114 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 ATP5EP2Q5VTU8 51 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 PTH2Q96A98 100 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 DOCK9Q9BZ29 2069 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 TSHBP01222 138 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 TRAV23DV6A0A075B6W5 121 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 PI4KAP42356 2102 aa6.28□□□□□ -1.4
CTNND1-227ENST00000530748 SPTBN1Q01082 2364 aaKnown RBP6.28□□□□□ -1.4
CTNND1-227ENST00000530748 BBC3Q96PG8 261 aaPredicted RBP6.27□□□□□ -1.4
CTNND1-227ENST00000530748 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
CTNND1-227ENST00000530748 TIMM17BO60830 172 aa6.27□□□□□ -1.41
CTNND1-227ENST00000530748 UBE2D3P61077 147 aa6.27□□□□□ -1.41
CTNND1-227ENST00000530748 C18orf65Q6ZTR6 163 aa6.27□□□□□ -1.41
CTNND1-227ENST00000530748 ZNF706Q9Y5V0 76 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-227ENST00000530748 TRBV27A0A0K0K1C4 114 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 SLPIP03973 132 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 SPTBN2O15020 2390 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 SYCNQ0VAF6 134 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 C9orf85Q96MD7 179 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 ESPL1Q14674 2120 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 PIK3CD-AS1Q5SR53 167 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 YPEL4Q96NS1 127 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 MED12Q93074 2177 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 NCOR1O75376 2440 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 TRIAP1O43715 76 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 MAPKAPK5-AS1Q8N8E1 139 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 NRACQ8N912 160 aa6.26□□□□□ -1.41
CTNND1-227ENST00000530748 TEX49A0A1B0GTD5 131 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 RNASE3P12724 160 aaKnown RBP6.25□□□□□ -1.41
CTNND1-227ENST00000530748 LELP1Q5T871 98 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 CD164L2Q6UWJ8 174 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 MRPS36P82909 103 aaKnown RBP6.25□□□□□ -1.41
CTNND1-227ENST00000530748 PRR9Q5T870 116 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 SDIM1Q6ZPB5 146 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 LINC01006Q8NI28 216 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 DHRS4-AS1Q9P1J3 65 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 CACNA1EQ15878 2313 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 KLLNB2CW77 178 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 M0R378 163 aa6.25□□□□□ -1.41
CTNND1-227ENST00000530748 CEP192Q8TEP8 1941 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 LOC107984640A0A0U1RRK4 108 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 COX17Q14061 63 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 AKAP6Q13023 2319 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 NUPR2A6NF83 97 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-227ENST00000530748 IGLV4-69A0A075B6H9 119 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 NDUFA7O95182 113 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 PLA2G2AP14555 144 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 ENHOQ6UWT2 76 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 DCANP1Q8TF63 244 aa6.24□□□□□ -1.41
CTNND1-227ENST00000530748 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-227ENST00000530748 LINC00959A0A1B0GUT2 108 aa6.23□□□□□ -1.41
CTNND1-227ENST00000530748 CLUHP3Q96NS8 147 aa6.23□□□□□ -1.41
CTNND1-227ENST00000530748 LOC100131303A0A0U1RQF7 123 aa6.23□□□□□ -1.41
CTNND1-227ENST00000530748 KPRPQ5T749 579 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-227ENST00000530748 CACNA1DQ01668 2161 aa6.23□□□□□ -1.41
CTNND1-227ENST00000530748 DOCK11Q5JSL3 2073 aa6.23□□□□□ -1.41
CTNND1-227ENST00000530748 RBX1P62877 108 aa6.23□□□□□ -1.41
CTNND1-227ENST00000530748 NDUFV3P56181 108 aaKnown RBP6.22□□□□□ -1.41
CTNND1-227ENST00000530748 CEP250Q9BV73 2442 aa6.22□□□□□ -1.41
CTNND1-227ENST00000530748 SCXQ7RTU7 201 aa6.22□□□□□ -1.41
CTNND1-227ENST00000530748 XAGE1AQ9HD64 81 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms