RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 SUMO2P61956 95 aaKnown RBP7.42□□□□□ -1.22
CAPN1-218ENST00000530442 ORMDL3Q8N138 153 aa7.42□□□□□ -1.22
CAPN1-218ENST00000530442 YPEL4Q96NS1 127 aa7.42□□□□□ -1.22
CAPN1-218ENST00000530442 CHCHD5Q9BSY4 110 aa7.42□□□□□ -1.22
CAPN1-218ENST00000530442 I3L3M4 83 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 RTL8CO15255 209 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 HLA-DQA1P01909 254 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 APCSP02743 223 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 PPBPP02775 128 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 AMTP48728 403 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 MPV17L2Q567V2 206 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 CBLN2Q8IUK8 224 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 C6orf223Q8N319 242 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 C10orf126Q8N4M7 172 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 CHCHD7Q9BUK0 85 aa7.41□□□□□ -1.22
CAPN1-218ENST00000530442 K7EP13 123 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 PHOX2AO14813 284 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 PMCHP20382 165 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 RPL32P62910 135 aaKnown RBP7.4□□□□□ -1.22
CAPN1-218ENST00000530442 GAGE6Q13070 117 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 PRELID3AQ96N28 172 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 C20orf78Q9BR46 151 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 TMEM243Q9BU79 118 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 SMIM2Q9BVW6 85 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 GNB1LQ9BYB4 327 aa7.4□□□□□ -1.22
CAPN1-218ENST00000530442 DNAH5Q8TE73 4624 aa7.39□□□□□ -1.23
CAPN1-218ENST00000530442 TRAV9-2A0A087WT02 112 aa7.39□□□□□ -1.23
CAPN1-218ENST00000530442 A0A087WX48 190 aa7.39□□□□□ -1.23
CAPN1-218ENST00000530442 KIAA1644Q3SXP7 199 aa7.39□□□□□ -1.23
CAPN1-218ENST00000530442 COX19Q49B96 90 aa7.39□□□□□ -1.23
CAPN1-218ENST00000530442 Q6ZRN7 208 aaPredicted RBP7.39□□□□□ -1.23
CAPN1-218ENST00000530442 Q8N976 141 aa7.39□□□□□ -1.23
CAPN1-218ENST00000530442 LAMTOR2Q9Y2Q5 125 aa7.39□□□□□ -1.23
CAPN1-218ENST00000530442 PKHD1P08F94 4074 aa7.38□□□□□ -1.23
CAPN1-218ENST00000530442 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.38□□□□□ -1.23
CAPN1-218ENST00000530442 IGKV2-29A2NJV5 120 aaPredicted RBP7.38□□□□□ -1.23
CAPN1-218ENST00000530442 IBA57-AS1B1ANH7 110 aa7.38□□□□□ -1.23
CAPN1-218ENST00000530442 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
CAPN1-218ENST00000530442 VCYO14598 125 aa7.38□□□□□ -1.23
CAPN1-218ENST00000530442 MT-ND6P03923 174 aa7.38□□□□□ -1.23
CAPN1-218ENST00000530442 ESDP10768 282 aa7.38□□□□□ -1.23
CAPN1-218ENST00000530442 BTF3P20290 206 aaKnown RBP7.38□□□□□ -1.23
CAPN1-218ENST00000530442 PKIAP61925 76 aa7.38□□□□□ -1.23
CAPN1-218ENST00000530442 RBX1P62877 108 aa7.38□□□□□ -1.23
CAPN1-218ENST00000530442 LAGE3Q14657 143 aa7.38□□□□□ -1.23
CAPN1-218ENST00000530442 MRPL18Q9H0U6 180 aaKnown RBP7.38□□□□□ -1.23
CAPN1-218ENST00000530442 UBE2L6O14933 153 aa7.37□□□□□ -1.23
CAPN1-218ENST00000530442 KIR2DL4Q99706 377 aa7.37□□□□□ -1.23
CAPN1-218ENST00000530442 SMCO4Q9NRQ5 59 aa7.37□□□□□ -1.23
CAPN1-218ENST00000530442 KLK12Q9UKR0 248 aa7.37□□□□□ -1.23
CAPN1-218ENST00000530442 DYNC1H1Q14204 4646 aaKnown RBP7.37□□□□□ -1.23
CAPN1-218ENST00000530442 IGLV4-60A0A075B6I1 120 aa7.36□□□□□ -1.23
CAPN1-218ENST00000530442 PRSS47A8MTI9 375 aa7.36□□□□□ -1.23
CAPN1-218ENST00000530442 FCER1GP30273 86 aa7.36□□□□□ -1.23
CAPN1-218ENST00000530442 C20orf203Q8NBC4 194 aa7.36□□□□□ -1.23
CAPN1-218ENST00000530442 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
CAPN1-218ENST00000530442 Q9HAA7 133 aa7.36□□□□□ -1.23
CAPN1-218ENST00000530442 LOC389332A0A1B0GUA5 103 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 A0A1B0GUV1 79 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 H7C423 109 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 TCAPO15273 167 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 ANGP03950 147 aaKnown RBP7.35□□□□□ -1.23
CAPN1-218ENST00000530442 FABP9Q0Z7S8 132 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 CLPSL2Q6UWE3 100 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 LINC00336Q6ZUF6 198 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 NFE4Q86UQ8 179 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 UBE2WQ96B02 151 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 ALKBH7Q9BT30 221 aaPredicted RBP7.35□□□□□ -1.23
CAPN1-218ENST00000530442 TRAPPC1Q9Y5R8 145 aa7.35□□□□□ -1.23
CAPN1-218ENST00000530442 PRSS29PA6NIE9 313 aa7.34□□□□□ -1.23
CAPN1-218ENST00000530442 SCO1O75880 301 aa7.34□□□□□ -1.23
CAPN1-218ENST00000530442 FGF6P10767 208 aa7.34□□□□□ -1.23
CAPN1-218ENST00000530442 TNP2Q05952 138 aa7.34□□□□□ -1.23
CAPN1-218ENST00000530442 ENHOQ6UWT2 76 aa7.34□□□□□ -1.23
CAPN1-218ENST00000530442 Q8N8P6 123 aa7.34□□□□□ -1.23
CAPN1-218ENST00000530442 PRR34Q9NV39 138 aa7.34□□□□□ -1.23
CAPN1-218ENST00000530442 TRAV8-3A0A0A6YYJ7 113 aa7.33□□□□□ -1.24
CAPN1-218ENST00000530442 CRPP02741 224 aa7.33□□□□□ -1.24
CAPN1-218ENST00000530442 AMMECR1LQ6DCA0 310 aa7.33□□□□□ -1.24
CAPN1-218ENST00000530442 RNASEKQ6P5S7 137 aaKnown RBP7.33□□□□□ -1.24
CAPN1-218ENST00000530442 MRPL52Q86TS9 123 aaKnown RBP7.33□□□□□ -1.24
CAPN1-218ENST00000530442 LINC00269Q8N2A0 174 aa7.33□□□□□ -1.24
CAPN1-218ENST00000530442 UBE2D4Q9Y2X8 147 aa7.33□□□□□ -1.24
CAPN1-218ENST00000530442 BIRC6Q9NR09 4857 aa7.32□□□□□ -1.24
CAPN1-218ENST00000530442 A0A1B0GVY2 172 aa7.32□□□□□ -1.24
CAPN1-218ENST00000530442 ZNF25P17030 456 aaPredicted RBP7.32□□□□□ -1.24
CAPN1-218ENST00000530442 IFI27P40305 119 aaPredicted RBP7.32□□□□□ -1.24
CAPN1-218ENST00000530442 RPL39P62891 51 aaKnown RBP7.32□□□□□ -1.24
CAPN1-218ENST00000530442 REG3AQ06141 175 aa7.32□□□□□ -1.24
CAPN1-218ENST00000530442 IGKV2D-24A0A075B6R9 120 aa7.31□□□□□ -1.24
CAPN1-218ENST00000530442 ATP6V1G1O75348 118 aa7.31□□□□□ -1.24
CAPN1-218ENST00000530442 RAB5AP20339 215 aa7.31□□□□□ -1.24
CAPN1-218ENST00000530442 Q0VG73 95 aa7.31□□□□□ -1.24
CAPN1-218ENST00000530442 NXT2Q9NPJ8 142 aaKnown RBP7.31□□□□□ -1.24
CAPN1-218ENST00000530442 LRP1BQ9NZR2 4599 aa7.3□□□□□ -1.24
CAPN1-218ENST00000530442 COLCA2A8K830 154 aa7.3□□□□□ -1.24
CAPN1-218ENST00000530442 MIAQ16674 131 aa7.3□□□□□ -1.24
CAPN1-218ENST00000530442 Q6ZUT4 128 aa7.3□□□□□ -1.24
CAPN1-218ENST00000530442 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms