RNA–Protein interactions for RNA: ENST00000530413.1

CFL1-209, Transcript of cofilin 1, humanhuman

TSL 1 (best)

Gene CFL1, Length 647 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-209ENST00000530413 SMLR1H3BR10 107 aa9.53□□□□□ -0.88
CFL1-209ENST00000530413 NDUFS6O75380 124 aaKnown RBP9.53□□□□□ -0.88
CFL1-209ENST00000530413 H2AFB1P0C5Y9 115 aa9.53□□□□□ -0.88
CFL1-209ENST00000530413 RPS20P60866 119 aaKnown RBP9.53□□□□□ -0.88
CFL1-209ENST00000530413 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
CFL1-209ENST00000530413 COTL1Q14019 142 aa9.53□□□□□ -0.88
CFL1-209ENST00000530413 HIGD2BQ4VC39 106 aa9.53□□□□□ -0.88
CFL1-209ENST00000530413 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.89
CFL1-209ENST00000530413 IGKV3OR2-268A0A0C4DH90 116 aa9.52□□□□□ -0.89
CFL1-209ENST00000530413 C19orf71A6NCJ1 209 aa9.52□□□□□ -0.89
CFL1-209ENST00000530413 F2Z2F3 143 aa9.52□□□□□ -0.89
CFL1-209ENST00000530413 CENPWQ5EE01 88 aa9.52□□□□□ -0.89
CFL1-209ENST00000530413 C11orf52Q96A22 123 aa9.52□□□□□ -0.89
CFL1-209ENST00000530413 LRP2P98164 4655 aa9.52□□□□□ -0.89
CFL1-209ENST00000530413 TRGC1P0CF51 173 aa9.51□□□□□ -0.89
CFL1-209ENST00000530413 NTF3P20783 257 aa9.51□□□□□ -0.89
CFL1-209ENST00000530413 CCL20P78556 96 aa9.51□□□□□ -0.89
CFL1-209ENST00000530413 LYZL1Q6UWQ5 148 aa9.51□□□□□ -0.89
CFL1-209ENST00000530413 STPG4Q8N801 248 aa9.51□□□□□ -0.89
CFL1-209ENST00000530413 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
CFL1-209ENST00000530413 ZNF345Q14585 488 aa9.5□□□□□ -0.89
CFL1-209ENST00000530413 GNG13Q9P2W3 67 aa9.5□□□□□ -0.89
CFL1-209ENST00000530413 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
CFL1-209ENST00000530413 RAB19A4D1S5 217 aa9.49□□□□□ -0.89
CFL1-209ENST00000530413 IFNA1P01562 189 aa9.49□□□□□ -0.89
CFL1-209ENST00000530413 CHCHD10Q8WYQ3 142 aaPredicted RBP9.49□□□□□ -0.89
CFL1-209ENST00000530413 MANBALQ9NQG1 85 aa9.49□□□□□ -0.89
CFL1-209ENST00000530413 A0A096LNI7 61 aa9.48□□□□□ -0.89
CFL1-209ENST00000530413 GVQW2A0A096LPI5 108 aaPredicted RBP9.48□□□□□ -0.89
CFL1-209ENST00000530413 A0A0J9YXV3 536 aa9.48□□□□□ -0.89
CFL1-209ENST00000530413 GNG4P50150 75 aa9.48□□□□□ -0.89
CFL1-209ENST00000530413 KRTAP10-8P60410 259 aa9.47□□□□□ -0.89
CFL1-209ENST00000530413 AMMECR1LQ6DCA0 310 aa9.47□□□□□ -0.89
CFL1-209ENST00000530413 C9orf62Q8N4C0 152 aa9.47□□□□□ -0.89
CFL1-209ENST00000530413 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
CFL1-209ENST00000530413 SMIM12Q96EX1 92 aa9.47□□□□□ -0.89
CFL1-209ENST00000530413 BATF3Q9NR55 127 aa9.47□□□□□ -0.89
CFL1-209ENST00000530413 RNF213Q63HN8 5207 aa9.47□□□□□ -0.89
CFL1-209ENST00000530413 TRAV26-2A0A0B4J265 109 aa9.46□□□□□ -0.9
CFL1-209ENST00000530413 KANTRA0A1W2PQU2 76 aa9.46□□□□□ -0.9
CFL1-209ENST00000530413 BCL2L11O43521 198 aa9.46□□□□□ -0.9
CFL1-209ENST00000530413 SPINK6Q6UWN8 80 aa9.46□□□□□ -0.9
CFL1-209ENST00000530413 TRBV20OR9-2A0A075B6H5 130 aa9.45□□□□□ -0.9
CFL1-209ENST00000530413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
CFL1-209ENST00000530413 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
CFL1-209ENST00000530413 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
CFL1-209ENST00000530413 HMSDA8MTL9 139 aa9.45□□□□□ -0.9
CFL1-209ENST00000530413 CTRLP40313 264 aa9.45□□□□□ -0.9
CFL1-209ENST00000530413 FOXI1Q12951 378 aa9.45□□□□□ -0.9
CFL1-209ENST00000530413 TWIST1Q15672 202 aa9.45□□□□□ -0.9
CFL1-209ENST00000530413 RNASEKQ6P5S7 137 aaKnown RBP9.45□□□□□ -0.9
CFL1-209ENST00000530413 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
CFL1-209ENST00000530413 Q6ZNX1 250 aa9.45□□□□□ -0.9
CFL1-209ENST00000530413 FGF6P10767 208 aa9.44□□□□□ -0.9
CFL1-209ENST00000530413 EIF5AP63241 154 aaKnown RBP9.44□□□□□ -0.9
CFL1-209ENST00000530413 NUDT10Q8NFP7 164 aa9.44□□□□□ -0.9
CFL1-209ENST00000530413 RPL39LQ96EH5 51 aaKnown RBP9.44□□□□□ -0.9
CFL1-209ENST00000530413 NUDT11Q96G61 164 aa9.44□□□□□ -0.9
CFL1-209ENST00000530413 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
CFL1-209ENST00000530413 H7C423 109 aa9.43□□□□□ -0.9
CFL1-209ENST00000530413 NCR2O95944 276 aa9.43□□□□□ -0.9
CFL1-209ENST00000530413 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
CFL1-209ENST00000530413 LINC00526Q96FQ7 95 aa9.43□□□□□ -0.9
CFL1-209ENST00000530413 CNFNQ9BYD5 112 aa9.43□□□□□ -0.9
CFL1-209ENST00000530413 BIN3Q9NQY0 253 aa9.43□□□□□ -0.9
CFL1-209ENST00000530413 MED9Q9NWA0 146 aa9.43□□□□□ -0.9
CFL1-209ENST00000530413 TNXBP22105 4242 aa9.42□□□□□ -0.9
CFL1-209ENST00000530413 PDE6DO43924 150 aa9.42□□□□□ -0.9
CFL1-209ENST00000530413 APCSP02743 223 aa9.42□□□□□ -0.9
CFL1-209ENST00000530413 XCL1P47992 114 aa9.42□□□□□ -0.9
CFL1-209ENST00000530413 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
CFL1-209ENST00000530413 RGS21Q2M5E4 152 aa9.42□□□□□ -0.9
CFL1-209ENST00000530413 Q6ZRP5 223 aa9.41□□□□□ -0.9
CFL1-209ENST00000530413 OR5A1Q8NGJ0 315 aa9.41□□□□□ -0.9
CFL1-209ENST00000530413 PKIGQ9Y2B9 76 aa9.41□□□□□ -0.9
CFL1-209ENST00000530413 LINC00959A0A1B0GUT2 108 aa9.4□□□□□ -0.9
CFL1-209ENST00000530413 SDHAF1A6NFY7 115 aa9.4□□□□□ -0.9
CFL1-209ENST00000530413 TEX46H3BTG2 121 aa9.4□□□□□ -0.9
CFL1-209ENST00000530413 CCL25O15444 150 aa9.4□□□□□ -0.9
CFL1-209ENST00000530413 ZNF25P17030 456 aaPredicted RBP9.4□□□□□ -0.9
CFL1-209ENST00000530413 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
CFL1-209ENST00000530413 CARD19Q96LW7 228 aa9.4□□□□□ -0.9
CFL1-209ENST00000530413 IGHV1-58A0A0C4DH39 117 aa9.39□□□□□ -0.91
CFL1-209ENST00000530413 FAM231BA6NCW3 169 aa9.39□□□□□ -0.91
CFL1-209ENST00000530413 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
CFL1-209ENST00000530413 RPP21Q9H633 154 aaKnown RBP9.39□□□□□ -0.91
CFL1-209ENST00000530413 PMCHP20382 165 aa9.38□□□□□ -0.91
CFL1-209ENST00000530413 TEX261Q6UWH6 196 aa9.38□□□□□ -0.91
CFL1-209ENST00000530413 SMIM15Q7Z3B0 74 aa9.38□□□□□ -0.91
CFL1-209ENST00000530413 TMEM101Q96IK0 257 aa9.38□□□□□ -0.91
CFL1-209ENST00000530413 RNASE7Q9H1E1 156 aaKnown RBP9.38□□□□□ -0.91
CFL1-209ENST00000530413 I3L3M4 83 aa9.37□□□□□ -0.91
CFL1-209ENST00000530413 BCL2P10415 239 aa9.37□□□□□ -0.91
CFL1-209ENST00000530413 SYCNQ0VAF6 134 aa9.37□□□□□ -0.91
CFL1-209ENST00000530413 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
CFL1-209ENST00000530413 K7EN84 100 aa9.36□□□□□ -0.91
CFL1-209ENST00000530413 GAS8-AS1O95177 125 aa9.36□□□□□ -0.91
CFL1-209ENST00000530413 SS18Q15532 418 aa9.36□□□□□ -0.91
CFL1-209ENST00000530413 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
CFL1-209ENST00000530413 TRBV6-5A0A0K0K1A5 114 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms