RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 AP1S3Q96PC3 154 aa6.54□□□□□ -1.36
COPB1-207ENST00000529866 MANBALQ9NQG1 85 aa6.54□□□□□ -1.36
COPB1-207ENST00000529866 LPAP08519 4548 aa6.54□□□□□ -1.36
COPB1-207ENST00000529866 TRAV1-1A0A0B4J248 108 aa6.53□□□□□ -1.36
COPB1-207ENST00000529866 M0QY20 66 aa6.53□□□□□ -1.36
COPB1-207ENST00000529866 NDUFS6O75380 124 aaKnown RBP6.53□□□□□ -1.36
COPB1-207ENST00000529866 FER1L6-AS1Q8NA97 138 aa6.53□□□□□ -1.36
COPB1-207ENST00000529866 OR2D3Q8NGH3 330 aa6.53□□□□□ -1.36
COPB1-207ENST00000529866 TPPP3Q9BW30 176 aa6.53□□□□□ -1.36
COPB1-207ENST00000529866 IGKV2-24A0A0C4DH68 120 aa6.52□□□□□ -1.37
COPB1-207ENST00000529866 SULT1A2P50226 295 aa6.52□□□□□ -1.37
COPB1-207ENST00000529866 COX6A2Q02221 97 aa6.52□□□□□ -1.37
COPB1-207ENST00000529866 CFAP161Q6P656 301 aa6.52□□□□□ -1.37
COPB1-207ENST00000529866 GFRA4Q9GZZ7 299 aa6.52□□□□□ -1.37
COPB1-207ENST00000529866 IGLV4-60A0A075B6I1 120 aa6.51□□□□□ -1.37
COPB1-207ENST00000529866 SLPIP03973 132 aa6.51□□□□□ -1.37
COPB1-207ENST00000529866 NKX2-5P52952 324 aaPredicted RBP6.51□□□□□ -1.37
COPB1-207ENST00000529866 EIF5AP63241 154 aaKnown RBP6.51□□□□□ -1.37
COPB1-207ENST00000529866 MEF2BQ02080 365 aaPredicted RBP6.51□□□□□ -1.37
COPB1-207ENST00000529866 IQCJQ1A5X6 159 aa6.51□□□□□ -1.37
COPB1-207ENST00000529866 STPG4Q8N801 248 aa6.51□□□□□ -1.37
COPB1-207ENST00000529866 C20orf203Q8NBC4 194 aa6.51□□□□□ -1.37
COPB1-207ENST00000529866 LYPD6BQ8NI32 183 aa6.51□□□□□ -1.37
COPB1-207ENST00000529866 LINC00474Q9P2X8 69 aa6.51□□□□□ -1.37
COPB1-207ENST00000529866 IGHV1-24A0A0C4DH33 117 aa6.5□□□□□ -1.37
COPB1-207ENST00000529866 SMIM17P0DL12 118 aa6.5□□□□□ -1.37
COPB1-207ENST00000529866 RPS10P46783 165 aaKnown RBP6.5□□□□□ -1.37
COPB1-207ENST00000529866 GNG4P50150 75 aa6.5□□□□□ -1.37
COPB1-207ENST00000529866 LYZL1Q6UWQ5 148 aa6.5□□□□□ -1.37
COPB1-207ENST00000529866 PKIGQ9Y2B9 76 aa6.5□□□□□ -1.37
COPB1-207ENST00000529866 FAM231BA6NCW3 169 aa6.49□□□□□ -1.37
COPB1-207ENST00000529866 K7EN84 100 aa6.49□□□□□ -1.37
COPB1-207ENST00000529866 BCL2P10415 239 aa6.49□□□□□ -1.37
COPB1-207ENST00000529866 CTRLP40313 264 aa6.49□□□□□ -1.37
COPB1-207ENST00000529866 RAB5CP51148 216 aa6.49□□□□□ -1.37
COPB1-207ENST00000529866 Q6ZRP5 223 aa6.49□□□□□ -1.37
COPB1-207ENST00000529866 FAT4Q6V0I7 4981 aa6.49□□□□□ -1.37
COPB1-207ENST00000529866 RPS20P60866 119 aaKnown RBP6.48□□□□□ -1.37
COPB1-207ENST00000529866 CACNG7P62955 275 aa6.48□□□□□ -1.37
COPB1-207ENST00000529866 RASL11AQ6T310 242 aa6.48□□□□□ -1.37
COPB1-207ENST00000529866 TCTE3Q8IZS6 198 aa6.48□□□□□ -1.37
COPB1-207ENST00000529866 PRSS3P2Q8NHM4 247 aa6.48□□□□□ -1.37
COPB1-207ENST00000529866 SMIM12Q96EX1 92 aa6.48□□□□□ -1.37
COPB1-207ENST00000529866 RNASE7Q9H1E1 156 aaKnown RBP6.48□□□□□ -1.37
COPB1-207ENST00000529866 MED9Q9NWA0 146 aa6.48□□□□□ -1.37
COPB1-207ENST00000529866 TRAV26-2A0A0B4J265 109 aa6.47□□□□□ -1.37
COPB1-207ENST00000529866 A0A1B0GUV1 79 aa6.47□□□□□ -1.37
COPB1-207ENST00000529866 H7C1H1 209 aa6.47□□□□□ -1.37
COPB1-207ENST00000529866 PDE6DO43924 150 aa6.47□□□□□ -1.37
COPB1-207ENST00000529866 NTF3P20783 257 aa6.47□□□□□ -1.37
COPB1-207ENST00000529866 FOXA3P55318 350 aaPredicted RBP6.47□□□□□ -1.37
COPB1-207ENST00000529866 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.371e-11■■■■□ 22.6
COPB1-207ENST00000529866 NUDT10Q8NFP7 164 aa6.47□□□□□ -1.37
COPB1-207ENST00000529866 NUDT11Q96G61 164 aa6.47□□□□□ -1.37
COPB1-207ENST00000529866 TMEM243Q9BU79 118 aa6.47□□□□□ -1.37
COPB1-207ENST00000529866 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.38
COPB1-207ENST00000529866 IFNA1P01562 189 aa6.46□□□□□ -1.38
COPB1-207ENST00000529866 HIGD2BQ4VC39 106 aa6.46□□□□□ -1.38
COPB1-207ENST00000529866 C9orf62Q8N4C0 152 aa6.46□□□□□ -1.38
COPB1-207ENST00000529866 C15orf56Q8N910 161 aa6.46□□□□□ -1.38
COPB1-207ENST00000529866 GATD1Q8NB37 220 aa6.46□□□□□ -1.38
COPB1-207ENST00000529866 RPL39LQ96EH5 51 aaKnown RBP6.46□□□□□ -1.38
COPB1-207ENST00000529866 PGLYRP4Q96LB8 373 aa6.46□□□□□ -1.38
COPB1-207ENST00000529866 CNFNQ9BYD5 112 aa6.46□□□□□ -1.38
COPB1-207ENST00000529866 A0A096LNI7 61 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 GAGE12HA6NDE8 117 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 F2Z2F3 143 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 UBE2L6O14933 153 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 TRGC1P0CF51 173 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 EIF5AL1Q6IS14 154 aaKnown RBP6.45□□□□□ -1.38
COPB1-207ENST00000529866 Q6ZNX1 250 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 SLC51BQ86UW2 128 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 ZNF664Q8N3J9 261 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 OCC1Q8TAD7 63 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 RPP21Q9H633 154 aaKnown RBP6.45□□□□□ -1.38
COPB1-207ENST00000529866 NIT2Q9NQR4 276 aa6.45□□□□□ -1.38
COPB1-207ENST00000529866 GVQW2A0A096LPI5 108 aaPredicted RBP6.44□□□□□ -1.38
COPB1-207ENST00000529866 XKRY2A2RUG3 117 aa6.44□□□□□ -1.38
COPB1-207ENST00000529866 TEX46H3BTG2 121 aa6.44□□□□□ -1.38
COPB1-207ENST00000529866 AMTP48728 403 aa6.44□□□□□ -1.38
COPB1-207ENST00000529866 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
COPB1-207ENST00000529866 TWIST1Q15672 202 aa6.43□□□□□ -1.38
COPB1-207ENST00000529866 ALKAL2Q6UX46 152 aa6.43□□□□□ -1.38
COPB1-207ENST00000529866 hCG_2014768A0A024R1R8 64 aa6.42□□□□□ -1.38
COPB1-207ENST00000529866 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.42□□□□□ -1.38
COPB1-207ENST00000529866 IGKV3OR2-268A0A0C4DH90 116 aa6.42□□□□□ -1.38
COPB1-207ENST00000529866 IGKV2-29A2NJV5 120 aaPredicted RBP6.42□□□□□ -1.38
COPB1-207ENST00000529866 COTL1Q14019 142 aa6.42□□□□□ -1.38
COPB1-207ENST00000529866 BIN3Q9NQY0 253 aa6.42□□□□□ -1.38
COPB1-207ENST00000529866 CHCHD10Q8WYQ3 142 aaPredicted RBP6.41□□□□□ -1.38
COPB1-207ENST00000529866 GATCO43716 136 aaKnown RBP6.4□□□□□ -1.38
COPB1-207ENST00000529866 CARD19Q96LW7 228 aa6.4□□□□□ -1.38
COPB1-207ENST00000529866 TMEM250H0YL14 139 aa6.39□□□□□ -1.39
COPB1-207ENST00000529866 MT-ND6P03923 174 aa6.39□□□□□ -1.39
COPB1-207ENST00000529866 TAGLN2P37802 199 aaKnown RBP6.39□□□□□ -1.39
COPB1-207ENST00000529866 AMMECR1LQ6DCA0 310 aa6.39□□□□□ -1.39
COPB1-207ENST00000529866 FAM231DQ6ZW35 169 aa6.39□□□□□ -1.39
COPB1-207ENST00000529866 SDHAF1A6NFY7 115 aa6.38□□□□□ -1.39
COPB1-207ENST00000529866 TSHBP01222 138 aa6.38□□□□□ -1.39
COPB1-207ENST00000529866 APCSP02743 223 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms