RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 NDUFB4O95168 129 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 SFT2D2O95562 160 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 CRISP2P16562 243 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 HSD52Q0P140 79 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 GAGE4Q13068 117 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 TMEM14EPQ6UXP3 125 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 DAZ4Q86SG3 579 aaKnown RBP2.3□□□□□ -2.04
PTPRC-213ENST00000529828 FER1L6-AS1Q8NA97 138 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 NMES1Q9C002 83 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 SMDT1Q9H4I9 107 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 DAZ3Q9NR90 486 aaKnown RBP2.3□□□□□ -2.04
PTPRC-213ENST00000529828 AP5S1Q9NUS5 200 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 TRBV19A0A075B6N1 114 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 TRAV4A0A0B4J268 109 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 FABP5P3A8MUU1 101 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 J3KT08 172 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 K7EPK0 472 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 RPL13AP40429 203 aaKnown RBP2.3□□□□□ -2.04
PTPRC-213ENST00000529828 FAM19A5Q7Z5A7 132 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-213ENST00000529828 OR2G3Q8NGZ4 309 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 TM2D2Q9BX73 214 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 SMIM3Q9BZL3 60 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 TIMM9Q9Y5J7 89 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 GAGE12HA6NDE8 117 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 FNDC10F2Z333 226 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 PLA2G10O15496 165 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 FABP4P15090 132 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 GATA1P15976 413 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-213ENST00000529828 DPPA3Q6W0C5 159 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 SLC25A29Q8N8R3 303 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 C5orf17Q8NAS9 161 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 OR11H4Q8NGC9 324 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 RASL10AQ92737 203 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 MRPL53Q96EL3 112 aaKnown RBP2.29□□□□□ -2.04
PTPRC-213ENST00000529828 ATP5SQ99766 215 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 ANAPC13Q9BS18 74 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 MLST8Q9BVC4 326 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 SAMD10Q9BYL1 202 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 GTSF1LQ9H1H1 148 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 ZNF492Q9P255 531 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 VAX2Q9UIW0 290 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 IGKV2D-24A0A075B6R9 120 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 UBE2L5PA0A1B0GUS4 154 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-213ENST00000529828 GNRH2O43555 120 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 ZNF253O75346 499 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 CST7O76096 145 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 ZNF138P52744 262 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 NDUFA6P56556 154 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 MEF2BQ02080 365 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-213ENST00000529828 LAGE3Q14657 143 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 LELP1Q5T871 98 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 ALKAL2Q6UX46 152 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 Q6ZRG5 221 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 TMED6Q8WW62 240 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 HIST1H2BLQ99880 126 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 DERL1Q9BUN8 251 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 AAMDCQ9H7C9 122 aa2.29□□□□□ -2.04
PTPRC-213ENST00000529828 TRGV11A0A075B6L2 103 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 TRAV8-3A0A0A6YYJ7 113 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 PANO1I0J062 215 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 M0R2P5 195 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 PFN1P07737 140 aaKnown RBP2.28□□□□□ -2.04
PTPRC-213ENST00000529828 CD164Q04900 197 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 ACOT6Q3I5F7 207 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-213ENST00000529828 COA6Q5JTJ3 125 aaKnown RBP2.28□□□□□ -2.04
PTPRC-213ENST00000529828 MIR17HGQ75NE6 70 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 SH2D6Q7Z4S9 175 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 GATD1Q8NB37 220 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 ATP6V0E2Q8NHE4 81 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 MBD3L1Q8WWY6 194 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 ZNF471Q9BX82 626 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-213ENST00000529828 SLC25A2Q9BXI2 301 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 KCNIP2Q9NS61 270 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 SLC39A9Q9NUM3 307 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 CYSLTR1Q9Y271 337 aa2.28□□□□□ -2.04
PTPRC-213ENST00000529828 FAM24AA6NFZ4 105 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 GGTLC3B5MD39 225 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 GAS8-AS1O95177 125 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 ZNF266Q14584 549 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 RHOHQ15669 191 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 C4orf26Q17RF5 130 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 GAGE13Q4V321 117 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 Q8N976 141 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 UBE2WQ96B02 151 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 TMEM18Q96B42 140 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 C2orf50Q96LR7 162 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 PRADC1Q9BSG0 188 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 TMEM14CQ9P0S9 112 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 Q9UF83 564 aa2.28□□□□□ -2.05
PTPRC-213ENST00000529828 BTCP35070 178 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 PDE6HQ13956 83 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 BATFQ16520 125 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 ZNF876PQ49A33 203 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 FFAR4Q5NUL3 377 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 C1orf195Q5TG92 126 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 CFAP126Q5VTH2 177 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 FAM19A1Q7Z5A9 133 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 FAM167A-AS1Q96KT0 104 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 SH3BGRL3Q9H299 93 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms