RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 CACNG7P62955 275 aa12.86□□□□□ -0.35
SF3B2-207ENST00000529577 GATD1Q8NB37 220 aa12.86□□□□□ -0.35
SF3B2-207ENST00000529577 PRSS3P2Q8NHM4 247 aa12.86□□□□□ -0.35
SF3B2-207ENST00000529577 TRAV1-1A0A0B4J248 108 aa12.85□□□□□ -0.35
SF3B2-207ENST00000529577 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
SF3B2-207ENST00000529577 H7C1H1 209 aa12.85□□□□□ -0.35
SF3B2-207ENST00000529577 COX6A2Q02221 97 aa12.85□□□□□ -0.35
SF3B2-207ENST00000529577 RNF185Q96GF1 192 aa12.85□□□□□ -0.35
SF3B2-207ENST00000529577 MANBALQ9NQG1 85 aa12.85□□□□□ -0.35
SF3B2-207ENST00000529577 FOXA3P55318 350 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-207ENST00000529577 RPS20P60866 119 aaKnown RBP12.84□□□□□ -0.35
SF3B2-207ENST00000529577 HIGD2BQ4VC39 106 aa12.84□□□□□ -0.35
SF3B2-207ENST00000529577 Q6ZNX1 250 aa12.84□□□□□ -0.35
SF3B2-207ENST00000529577 DPH3P1Q9H4G8 78 aa12.84□□□□□ -0.35
SF3B2-207ENST00000529577 KANTRA0A1W2PQU2 76 aa12.83□□□□□ -0.36
SF3B2-207ENST00000529577 CTRLP40313 264 aa12.83□□□□□ -0.36
SF3B2-207ENST00000529577 C9orf62Q8N4C0 152 aa12.83□□□□□ -0.36
SF3B2-207ENST00000529577 NUDT10Q8NFP7 164 aa12.83□□□□□ -0.36
SF3B2-207ENST00000529577 NUDT11Q96G61 164 aa12.83□□□□□ -0.36
SF3B2-207ENST00000529577 AMTP48728 403 aa12.82□□□□□ -0.36
SF3B2-207ENST00000529577 RPL39LQ96EH5 51 aaKnown RBP12.82□□□□□ -0.36
SF3B2-207ENST00000529577 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
SF3B2-207ENST00000529577 F2Z2F3 143 aa12.81□□□□□ -0.36
SF3B2-207ENST00000529577 K7EN84 100 aa12.81□□□□□ -0.36
SF3B2-207ENST00000529577 AP5S1Q9NUS5 200 aa12.81□□□□□ -0.36
SF3B2-207ENST00000529577 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
SF3B2-207ENST00000529577 GNG4P50150 75 aa12.8□□□□□ -0.36
SF3B2-207ENST00000529577 DPH3Q96FX2 82 aa12.8□□□□□ -0.36
SF3B2-207ENST00000529577 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-207ENST00000529577 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-207ENST00000529577 IGKV2-29A2NJV5 120 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-207ENST00000529577 GAS8-AS1O95177 125 aa12.79□□□□□ -0.36
SF3B2-207ENST00000529577 IFNA1P01562 189 aa12.79□□□□□ -0.36
SF3B2-207ENST00000529577 TRGC1P0CF51 173 aa12.79□□□□□ -0.36
SF3B2-207ENST00000529577 SULT1A2P50226 295 aa12.79□□□□□ -0.36
SF3B2-207ENST00000529577 PRR3P79522 188 aaKnown RBP12.79□□□□□ -0.36
SF3B2-207ENST00000529577 COTL1Q14019 142 aa12.79□□□□□ -0.36
SF3B2-207ENST00000529577 GTSF1Q8WW33 167 aa12.79□□□□□ -0.36
SF3B2-207ENST00000529577 CHCHD10Q8WYQ3 142 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-207ENST00000529577 SMIM12Q96EX1 92 aa12.79□□□□□ -0.36
SF3B2-207ENST00000529577 A0A096LNI7 61 aa12.78□□□□□ -0.36
SF3B2-207ENST00000529577 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
SF3B2-207ENST00000529577 RPS10P46783 165 aaKnown RBP12.78□□□□□ -0.36
SF3B2-207ENST00000529577 MEF2BQ02080 365 aaPredicted RBP12.78□□□□□ -0.36
SF3B2-207ENST00000529577 FOXI1Q12951 378 aa12.78□□□□□ -0.36
SF3B2-207ENST00000529577 WDR73Q6P4I2 378 aa12.78□□□□□ -0.36
SF3B2-207ENST00000529577 LINC01600Q96MT4 127 aa12.78□□□□□ -0.36
SF3B2-207ENST00000529577 RNASE7Q9H1E1 156 aaKnown RBP12.78□□□□□ -0.36
SF3B2-207ENST00000529577 GVQW2A0A096LPI5 108 aaPredicted RBP12.77□□□□□ -0.37
SF3B2-207ENST00000529577 FAM231BA6NCW3 169 aa12.77□□□□□ -0.37
SF3B2-207ENST00000529577 UBE2L6O14933 153 aa12.77□□□□□ -0.37
SF3B2-207ENST00000529577 MAJINQ3KP22 176 aa12.77□□□□□ -0.37
SF3B2-207ENST00000529577 MED9Q9NWA0 146 aa12.77□□□□□ -0.37
SF3B2-207ENST00000529577 LPAP08519 4548 aa12.76□□□□□ -0.37
SF3B2-207ENST00000529577 NDUFS6O75380 124 aaKnown RBP12.76□□□□□ -0.37
SF3B2-207ENST00000529577 TWIST1Q15672 202 aa12.76□□□□□ -0.37
SF3B2-207ENST00000529577 LINC00526Q96FQ7 95 aa12.76□□□□□ -0.37
SF3B2-207ENST00000529577 KRTAP10-8P60410 259 aa12.75□□□□□ -0.37
SF3B2-207ENST00000529577 STPG4Q8N801 248 aa12.75□□□□□ -0.37
SF3B2-207ENST00000529577 LYPD6BQ8NI32 183 aa12.75□□□□□ -0.37
SF3B2-207ENST00000529577 OCC1Q8TAD7 63 aa12.75□□□□□ -0.37
SF3B2-207ENST00000529577 BCL2P10415 239 aa12.74□□□□□ -0.37
SF3B2-207ENST00000529577 XKRY2A2RUG3 117 aa12.73□□□□□ -0.37
SF3B2-207ENST00000529577 PDE6DO43924 150 aa12.73□□□□□ -0.37
SF3B2-207ENST00000529577 FGF6P10767 208 aa12.73□□□□□ -0.37
SF3B2-207ENST00000529577 EIF5AP63241 154 aaKnown RBP12.73□□□□□ -0.37
SF3B2-207ENST00000529577 RPP21Q9H633 154 aaKnown RBP12.73□□□□□ -0.37
SF3B2-207ENST00000529577 SRSF9Q13242 221 aaKnown RBP eCLIP12.71□□□□□ -0.37
SF3B2-207ENST00000529577 CFAP161Q6P656 301 aa12.71□□□□□ -0.37
SF3B2-207ENST00000529577 C7orf33Q8WU49 177 aa12.71□□□□□ -0.37
SF3B2-207ENST00000529577 SDHAF1A6NFY7 115 aa12.7□□□□□ -0.38
SF3B2-207ENST00000529577 RNASEKQ6P5S7 137 aaKnown RBP12.7□□□□□ -0.38
SF3B2-207ENST00000529577 A0A0J9YXV3 536 aa12.69□□□□□ -0.38
SF3B2-207ENST00000529577 NCR2O95944 276 aa12.69□□□□□ -0.38
SF3B2-207ENST00000529577 TSHBP01222 138 aa12.69□□□□□ -0.38
SF3B2-207ENST00000529577 ESDP10768 282 aa12.69□□□□□ -0.38
SF3B2-207ENST00000529577 LINC00959A0A1B0GUT2 108 aa12.68□□□□□ -0.38
SF3B2-207ENST00000529577 XCL1P47992 114 aa12.68□□□□□ -0.38
SF3B2-207ENST00000529577 AMMECR1LQ6DCA0 310 aa12.68□□□□□ -0.38
SF3B2-207ENST00000529577 OR5A1Q8NGJ0 315 aa12.68□□□□□ -0.38
SF3B2-207ENST00000529577 H7C423 109 aa12.67□□□□□ -0.38
SF3B2-207ENST00000529577 CCL25O15444 150 aa12.67□□□□□ -0.38
SF3B2-207ENST00000529577 APCSP02743 223 aa12.67□□□□□ -0.38
SF3B2-207ENST00000529577 TRBV6-5A0A0K0K1A5 114 aa12.66□□□□□ -0.38
SF3B2-207ENST00000529577 BIN3Q9NQY0 253 aa12.66□□□□□ -0.38
SF3B2-207ENST00000529577 TMEM242Q9NWH2 141 aa12.65□□□□□ -0.38
SF3B2-207ENST00000529577 I3L3M4 83 aa12.63□□□□□ -0.39
SF3B2-207ENST00000529577 CDC42SE2Q9NRR3 84 aa12.63□□□□□ -0.39
SF3B2-207ENST00000529577 A0A1W2PNN7 141 aa12.62□□□□□ -0.39
SF3B2-207ENST00000529577 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
SF3B2-207ENST00000529577 ZNF25P17030 456 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-207ENST00000529577 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
SF3B2-207ENST00000529577 SPINK6Q6UWN8 80 aa12.62□□□□□ -0.39
SF3B2-207ENST00000529577 IGHV1-58A0A0C4DH39 117 aa12.61□□□□□ -0.39
SF3B2-207ENST00000529577 PMCHP20382 165 aa12.61□□□□□ -0.39
SF3B2-207ENST00000529577 EIF5AL1Q6IS14 154 aaKnown RBP12.61□□□□□ -0.39
SF3B2-207ENST00000529577 CARD19Q96LW7 228 aa12.61□□□□□ -0.39
SF3B2-207ENST00000529577 GATCO43716 136 aaKnown RBP12.6□□□□□ -0.39
SF3B2-207ENST00000529577 FAM231DQ6ZW35 169 aa12.6□□□□□ -0.39
SF3B2-207ENST00000529577 MRPL52Q86TS9 123 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms