RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 ALKAL2Q6UX46 152 aa8.47□□□□□ -1.05
HIF3A-212ENST00000529205 MAP1LC3BQ9GZQ8 125 aa8.47□□□□□ -1.05
HIF3A-212ENST00000529205 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
HIF3A-212ENST00000529205 IGLV4-60A0A075B6I1 120 aa8.46□□□□□ -1.06
HIF3A-212ENST00000529205 PRSS3P2Q8NHM4 247 aa8.46□□□□□ -1.06
HIF3A-212ENST00000529205 MBD3L1Q8WWY6 194 aa8.46□□□□□ -1.06
HIF3A-212ENST00000529205 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
HIF3A-212ENST00000529205 ODF1Q14990 250 aa8.45□□□□□ -1.06
HIF3A-212ENST00000529205 BAGE2Q86Y30 109 aa8.45□□□□□ -1.06
HIF3A-212ENST00000529205 FAM213BQ8TBF2 198 aa8.45□□□□□ -1.06
HIF3A-212ENST00000529205 TNXBP22105 4242 aa8.45□□□□□ -1.06
HIF3A-212ENST00000529205 A0A1B0GV50 99 aa8.44□□□□□ -1.06
HIF3A-212ENST00000529205 M0QY20 66 aa8.44□□□□□ -1.06
HIF3A-212ENST00000529205 IFITM2Q01629 132 aa8.44□□□□□ -1.06
HIF3A-212ENST00000529205 HIGD2BQ4VC39 106 aa8.44□□□□□ -1.06
HIF3A-212ENST00000529205 Q6ZRP5 223 aa8.44□□□□□ -1.06
HIF3A-212ENST00000529205 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
HIF3A-212ENST00000529205 PGLYRP4Q96LB8 373 aa8.44□□□□□ -1.06
HIF3A-212ENST00000529205 IGKV3OR2-268A0A0C4DH90 116 aa8.43□□□□□ -1.06
HIF3A-212ENST00000529205 AMTP48728 403 aa8.43□□□□□ -1.06
HIF3A-212ENST00000529205 EIF5AP63241 154 aaKnown RBP8.43□□□□□ -1.06
HIF3A-212ENST00000529205 COTL1Q14019 142 aa8.43□□□□□ -1.06
HIF3A-212ENST00000529205 RASL11AQ6T310 242 aa8.43□□□□□ -1.06
HIF3A-212ENST00000529205 TPPP3Q9BW30 176 aa8.43□□□□□ -1.06
HIF3A-212ENST00000529205 GFRA4Q9GZZ7 299 aa8.43□□□□□ -1.06
HIF3A-212ENST00000529205 UMAD1C9J7I0 102 aa8.42□□□□□ -1.06
HIF3A-212ENST00000529205 PAGE4O60829 102 aa8.42□□□□□ -1.06
HIF3A-212ENST00000529205 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
HIF3A-212ENST00000529205 MLST8Q9BVC4 326 aa8.42□□□□□ -1.06
HIF3A-212ENST00000529205 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
HIF3A-212ENST00000529205 CACNG7P62955 275 aa8.41□□□□□ -1.06
HIF3A-212ENST00000529205 AMMECR1LQ6DCA0 310 aa8.41□□□□□ -1.06
HIF3A-212ENST00000529205 TEX261Q6UWH6 196 aa8.41□□□□□ -1.06
HIF3A-212ENST00000529205 SFT2D1Q8WV19 159 aa8.41□□□□□ -1.06
HIF3A-212ENST00000529205 A0A096LNI7 61 aa8.4□□□□□ -1.06
HIF3A-212ENST00000529205 GVQW2A0A096LPI5 108 aaPredicted RBP8.4□□□□□ -1.06
HIF3A-212ENST00000529205 TRAV1-1A0A0B4J248 108 aa8.4□□□□□ -1.06
HIF3A-212ENST00000529205 FAM231BA6NCW3 169 aa8.4□□□□□ -1.06
HIF3A-212ENST00000529205 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
HIF3A-212ENST00000529205 TRGC1P0CF51 173 aa8.4□□□□□ -1.06
HIF3A-212ENST00000529205 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
HIF3A-212ENST00000529205 SRSF9Q13242 221 aaKnown RBP eCLIP8.4□□□□□ -1.06
HIF3A-212ENST00000529205 FER1L6-AS1Q8NA97 138 aa8.4□□□□□ -1.06
HIF3A-212ENST00000529205 SCO2A0A1W2PP80 73 aa8.39□□□□□ -1.07
HIF3A-212ENST00000529205 CHCHD10Q8WYQ3 142 aaPredicted RBP8.39□□□□□ -1.07
HIF3A-212ENST00000529205 XKRY2A2RUG3 117 aa8.38□□□□□ -1.07
HIF3A-212ENST00000529205 F2Z2F3 143 aa8.37□□□□□ -1.07
HIF3A-212ENST00000529205 TEX46H3BTG2 121 aa8.37□□□□□ -1.07
HIF3A-212ENST00000529205 EIF5AL1Q6IS14 154 aaKnown RBP8.37□□□□□ -1.07
HIF3A-212ENST00000529205 RNASEKQ6P5S7 137 aaKnown RBP8.37□□□□□ -1.07
HIF3A-212ENST00000529205 H7C423 109 aa8.36□□□□□ -1.07
HIF3A-212ENST00000529205 IGLC6P0CF74 106 aa8.36□□□□□ -1.07
HIF3A-212ENST00000529205 ZNF664Q8N3J9 261 aa8.36□□□□□ -1.07
HIF3A-212ENST00000529205 OR2D3Q8NGH3 330 aa8.36□□□□□ -1.07
HIF3A-212ENST00000529205 CARD19Q96LW7 228 aa8.36□□□□□ -1.07
HIF3A-212ENST00000529205 BTF3L4Q96K17 158 aa8.35□□□□□ -1.07
HIF3A-212ENST00000529205 GNG13Q9P2W3 67 aa8.35□□□□□ -1.07
HIF3A-212ENST00000529205 IGHV1-58A0A0C4DH39 117 aa8.34□□□□□ -1.07
HIF3A-212ENST00000529205 ZNF561-AS1K7EIQ3 104 aa8.34□□□□□ -1.07
HIF3A-212ENST00000529205 NCR2O95944 276 aa8.34□□□□□ -1.07
HIF3A-212ENST00000529205 NTF3P20783 257 aa8.34□□□□□ -1.07
HIF3A-212ENST00000529205 RPL35P42766 123 aaKnown RBP8.34□□□□□ -1.07
HIF3A-212ENST00000529205 SRSF3P84103 164 aaKnown RBP8.34□□□□□ -1.07
HIF3A-212ENST00000529205 TMEM101Q96IK0 257 aa8.34□□□□□ -1.07
HIF3A-212ENST00000529205 C9JQL5 133 aa8.33□□□□□ -1.08
HIF3A-212ENST00000529205 APCSP02743 223 aa8.33□□□□□ -1.08
HIF3A-212ENST00000529205 XCL1P47992 114 aa8.33□□□□□ -1.08
HIF3A-212ENST00000529205 FOXI1Q12951 378 aa8.33□□□□□ -1.08
HIF3A-212ENST00000529205 OR5A1Q8NGJ0 315 aa8.33□□□□□ -1.08
HIF3A-212ENST00000529205 ISOC2Q96AB3 205 aa8.33□□□□□ -1.08
HIF3A-212ENST00000529205 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
HIF3A-212ENST00000529205 A0A0U1RQV1 116 aa8.32□□□□□ -1.08
HIF3A-212ENST00000529205 IFNA1P01562 189 aa8.32□□□□□ -1.08
HIF3A-212ENST00000529205 FGF6P10767 208 aa8.32□□□□□ -1.08
HIF3A-212ENST00000529205 ZNF25P17030 456 aaPredicted RBP8.32□□□□□ -1.08
HIF3A-212ENST00000529205 BLOC1S1P78537 153 aa8.32□□□□□ -1.08
HIF3A-212ENST00000529205 SYCNQ0VAF6 134 aa8.32□□□□□ -1.08
HIF3A-212ENST00000529205 LYZL1Q6UWQ5 148 aa8.32□□□□□ -1.08
HIF3A-212ENST00000529205 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
HIF3A-212ENST00000529205 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.31□□□□□ -1.08
HIF3A-212ENST00000529205 LOC107984640A0A0U1RRK4 108 aa8.31□□□□□ -1.08
HIF3A-212ENST00000529205 IGKV2-29A2NJV5 120 aaPredicted RBP8.31□□□□□ -1.08
HIF3A-212ENST00000529205 MT-ND6P03923 174 aa8.31□□□□□ -1.08
HIF3A-212ENST00000529205 BCL2P10415 239 aa8.31□□□□□ -1.08
HIF3A-212ENST00000529205 GAGE2BQ13066 116 aa8.31□□□□□ -1.08
HIF3A-212ENST00000529205 SS18Q15532 418 aa8.31□□□□□ -1.08
HIF3A-212ENST00000529205 TWIST1Q15672 202 aa8.31□□□□□ -1.08
HIF3A-212ENST00000529205 SMIM12Q96EX1 92 aa8.31□□□□□ -1.08
HIF3A-212ENST00000529205 BIN3Q9NQY0 253 aa8.31□□□□□ -1.08
HIF3A-212ENST00000529205 CCL25O15444 150 aa8.3□□□□□ -1.08
HIF3A-212ENST00000529205 GNG4P50150 75 aa8.3□□□□□ -1.08
HIF3A-212ENST00000529205 PTTG1IPP53801 180 aa8.3□□□□□ -1.08
HIF3A-212ENST00000529205 CENPWQ5EE01 88 aa8.3□□□□□ -1.08
HIF3A-212ENST00000529205 SMIM15Q7Z3B0 74 aa8.3□□□□□ -1.08
HIF3A-212ENST00000529205 C11orf52Q96A22 123 aa8.3□□□□□ -1.08
HIF3A-212ENST00000529205 TRBV20OR9-2A0A075B6H5 130 aa8.29□□□□□ -1.08
HIF3A-212ENST00000529205 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
HIF3A-212ENST00000529205 C19orf71A6NCJ1 209 aa8.29□□□□□ -1.08
HIF3A-212ENST00000529205 GATD1Q8NB37 220 aa8.29□□□□□ -1.08
HIF3A-212ENST00000529205 LINC00526Q96FQ7 95 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms