RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 RASL11AQ6T310 242 aa11.52□□□□□ -0.57
SSRP1-204ENST00000529002 STOML3Q8TAV4 291 aa11.52□□□□□ -0.57
SSRP1-204ENST00000529002 PGLYRP4Q96LB8 373 aa11.52□□□□□ -0.57
SSRP1-204ENST00000529002 MLST8Q9BVC4 326 aa11.52□□□□□ -0.57
SSRP1-204ENST00000529002 MAP1LC3BQ9GZQ8 125 aa11.52□□□□□ -0.57
SSRP1-204ENST00000529002 Q5BKY6 102 aa11.51□□□□□ -0.57
SSRP1-204ENST00000529002 TPPP3Q9BW30 176 aa11.51□□□□□ -0.57
SSRP1-204ENST00000529002 MT-ND6P03923 174 aa11.5□□□□□ -0.57
SSRP1-204ENST00000529002 PTTG1IPP53801 180 aa11.5□□□□□ -0.57
SSRP1-204ENST00000529002 COTL1Q14019 142 aa11.5□□□□□ -0.57
SSRP1-204ENST00000529002 C1orf137Q5JT78 98 aa11.5□□□□□ -0.57
SSRP1-204ENST00000529002 BAGE2Q86Y30 109 aa11.5□□□□□ -0.57
SSRP1-204ENST00000529002 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
SSRP1-204ENST00000529002 PAGE4O60829 102 aa11.49□□□□□ -0.57
SSRP1-204ENST00000529002 XCL1P47992 114 aa11.49□□□□□ -0.57
SSRP1-204ENST00000529002 DEFA1P59665 94 aa11.49□□□□□ -0.57
SSRP1-204ENST00000529002 NIT2Q9NQR4 276 aa11.49□□□□□ -0.57
SSRP1-204ENST00000529002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.48□□□□□ -0.57
SSRP1-204ENST00000529002 IGKV2-29A2NJV5 120 aaPredicted RBP11.48□□□□□ -0.57
SSRP1-204ENST00000529002 FHITP49789 147 aa11.48□□□□□ -0.57
SSRP1-204ENST00000529002 AKR1C8PQ5T2L2 129 aa11.48□□□□□ -0.57
SSRP1-204ENST00000529002 RNASEKQ6P5S7 137 aaKnown RBP11.48□□□□□ -0.57
SSRP1-204ENST00000529002 AMMECR1LQ6DCA0 310 aa11.47□□□□□ -0.57
SSRP1-204ENST00000529002 Q6ZNX1 250 aa11.47□□□□□ -0.57
SSRP1-204ENST00000529002 PHF5AQ7RTV0 110 aaKnown RBP11.47□□□□□ -0.57
SSRP1-204ENST00000529002 IGLC6P0CF74 106 aa11.46□□□□□ -0.57
SSRP1-204ENST00000529002 SYCNQ0VAF6 134 aa11.46□□□□□ -0.57
SSRP1-204ENST00000529002 IGHV1-58A0A0C4DH39 117 aa11.45□□□□□ -0.58
SSRP1-204ENST00000529002 BCL2P10415 239 aa11.45□□□□□ -0.58
SSRP1-204ENST00000529002 FER1L6-AS1Q8NA97 138 aa11.45□□□□□ -0.58
SSRP1-204ENST00000529002 S100ZQ8WXG8 99 aa11.45□□□□□ -0.58
SSRP1-204ENST00000529002 TCEAL7Q9BRU2 100 aa11.45□□□□□ -0.58
SSRP1-204ENST00000529002 BORCS7-ASMTA0A0B4J1R7 106 aa11.44□□□□□ -0.58
SSRP1-204ENST00000529002 A0A1B0GV50 99 aa11.44□□□□□ -0.58
SSRP1-204ENST00000529002 CCL25O15444 150 aa11.44□□□□□ -0.58
SSRP1-204ENST00000529002 NTF3P20783 257 aa11.44□□□□□ -0.58
SSRP1-204ENST00000529002 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
SSRP1-204ENST00000529002 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
SSRP1-204ENST00000529002 FGF6P10767 208 aa11.43□□□□□ -0.58
SSRP1-204ENST00000529002 ALG5Q9Y673 324 aa11.43□□□□□ -0.58
SSRP1-204ENST00000529002 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
SSRP1-204ENST00000529002 IGLV7-43P04211 117 aa11.42□□□□□ -0.58
SSRP1-204ENST00000529002 KRTAP11-1Q8IUC1 163 aa11.42□□□□□ -0.58
SSRP1-204ENST00000529002 LINC00959A0A1B0GUT2 108 aa11.41□□□□□ -0.58
SSRP1-204ENST00000529002 ZNF561-AS1K7EIQ3 104 aa11.41□□□□□ -0.58
SSRP1-204ENST00000529002 S100A9P06702 114 aaKnown RBP11.41□□□□□ -0.58
SSRP1-204ENST00000529002 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
SSRP1-204ENST00000529002 OR5A1Q8NGJ0 315 aa11.41□□□□□ -0.58
SSRP1-204ENST00000529002 DIRC1Q969H9 104 aa11.41□□□□□ -0.58
SSRP1-204ENST00000529002 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
SSRP1-204ENST00000529002 KRTAP1-4P0C5Y4 121 aa11.4□□□□□ -0.58
SSRP1-204ENST00000529002 RPL39LQ96EH5 51 aaKnown RBP11.4□□□□□ -0.58
SSRP1-204ENST00000529002 H0Y9J4 135 aa11.39□□□□□ -0.59
SSRP1-204ENST00000529002 CAMPP49913 170 aa11.39□□□□□ -0.59
SSRP1-204ENST00000529002 TMUB2Q71RG4 321 aa11.39□□□□□ -0.59
SSRP1-204ENST00000529002 GATD1Q8NB37 220 aa11.39□□□□□ -0.59
SSRP1-204ENST00000529002 FXYD6-FXYD2A0A087WZ82 144 aa11.38□□□□□ -0.59
SSRP1-204ENST00000529002 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
SSRP1-204ENST00000529002 MED28Q9H204 178 aa11.38□□□□□ -0.59
SSRP1-204ENST00000529002 IGLV1-50A0A075B6I6 118 aa11.37□□□□□ -0.59
SSRP1-204ENST00000529002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.37□□□□□ -0.59
SSRP1-204ENST00000529002 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
SSRP1-204ENST00000529002 RPL35P42766 123 aaKnown RBP11.37□□□□□ -0.59
SSRP1-204ENST00000529002 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
SSRP1-204ENST00000529002 RPL18AQ02543 176 aaKnown RBP11.37□□□□□ -0.59
SSRP1-204ENST00000529002 LINC00299Q6ZSB3 139 aa11.37□□□□□ -0.59
SSRP1-204ENST00000529002 NUP35Q8NFH5 326 aa11.37□□□□□ -0.59
SSRP1-204ENST00000529002 APCSP02743 223 aa11.36□□□□□ -0.59
SSRP1-204ENST00000529002 OPRPNQ99935 248 aaPredicted RBP11.36□□□□□ -0.59
SSRP1-204ENST00000529002 SFT2D1Q8WV19 159 aa11.35□□□□□ -0.59
SSRP1-204ENST00000529002 CYTL1Q9NRR1 136 aa11.35□□□□□ -0.59
SSRP1-204ENST00000529002 NDUFA13Q9P0J0 144 aa11.35□□□□□ -0.59
SSRP1-204ENST00000529002 A0A087WZ39 114 aa11.34□□□□□ -0.59
SSRP1-204ENST00000529002 H7C423 109 aa11.34□□□□□ -0.59
SSRP1-204ENST00000529002 PFDN1O60925 122 aa11.34□□□□□ -0.59
SSRP1-204ENST00000529002 EIF5AP63241 154 aaKnown RBP11.34□□□□□ -0.59
SSRP1-204ENST00000529002 FAM168BA1KXE4 195 aa11.33□□□□□ -0.6
SSRP1-204ENST00000529002 C19orf71A6NCJ1 209 aa11.33□□□□□ -0.6
SSRP1-204ENST00000529002 APOMO95445 188 aa11.33□□□□□ -0.6
SSRP1-204ENST00000529002 TSPAN13O95857 204 aa11.33□□□□□ -0.6
SSRP1-204ENST00000529002 NCR2O95944 276 aa11.33□□□□□ -0.6
SSRP1-204ENST00000529002 RPS20P60866 119 aaKnown RBP11.33□□□□□ -0.6
SSRP1-204ENST00000529002 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
SSRP1-204ENST00000529002 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
SSRP1-204ENST00000529002 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
SSRP1-204ENST00000529002 SS18Q15532 418 aa11.32□□□□□ -0.6
SSRP1-204ENST00000529002 CENPWQ5EE01 88 aa11.32□□□□□ -0.6
SSRP1-204ENST00000529002 ISOC2Q96AB3 205 aa11.32□□□□□ -0.6
SSRP1-204ENST00000529002 SDHAF1A6NFY7 115 aa11.31□□□□□ -0.6
SSRP1-204ENST00000529002 F2Z2F3 143 aa11.31□□□□□ -0.6
SSRP1-204ENST00000529002 ZNF25P17030 456 aaPredicted RBP11.31□□□□□ -0.6
SSRP1-204ENST00000529002 UBE2D1P51668 147 aa11.31□□□□□ -0.6
SSRP1-204ENST00000529002 FAM213BQ8TBF2 198 aa11.31□□□□□ -0.6
SSRP1-204ENST00000529002 TMEM101Q96IK0 257 aa11.31□□□□□ -0.6
SSRP1-204ENST00000529002 BTF3L4Q96K17 158 aa11.31□□□□□ -0.6
SSRP1-204ENST00000529002 RAB19A4D1S5 217 aa11.3□□□□□ -0.6
SSRP1-204ENST00000529002 IFNA1P01562 189 aa11.3□□□□□ -0.6
SSRP1-204ENST00000529002 TWIST1Q15672 202 aa11.3□□□□□ -0.6
SSRP1-204ENST00000529002 KCNRGQ8N5I3 272 aa11.3□□□□□ -0.6
SSRP1-204ENST00000529002 MBD3L1Q8WWY6 194 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms