RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 OR10J3Q5JRS4 329 aa8.71□□□□□ -1.02
SCN3B-205ENST00000528267 NIT2Q9NQR4 276 aa8.71□□□□□ -1.02
SCN3B-205ENST00000528267 PKHD1P08F94 4074 aa8.7□□□□□ -1.02
SCN3B-205ENST00000528267 NDUFA6P56556 154 aa8.7□□□□□ -1.02
SCN3B-205ENST00000528267 KIAA1644Q3SXP7 199 aa8.7□□□□□ -1.02
SCN3B-205ENST00000528267 DNAJC30Q96LL9 226 aa8.7□□□□□ -1.02
SCN3B-205ENST00000528267 TRBV6-8A0A0A6YYG3 113 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 H7C1H1 209 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 IGHV3-30-3P0DP02 117 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 MRPL51Q4U2R6 128 aaKnown RBP8.69□□□□□ -1.02
SCN3B-205ENST00000528267 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 FAM104BQ5XKR9 115 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 Q6ZRN7 208 aaPredicted RBP8.69□□□□□ -1.02
SCN3B-205ENST00000528267 SMIM15Q7Z3B0 74 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 NRACQ8N912 160 aa8.69□□□□□ -1.02
SCN3B-205ENST00000528267 DAZ4Q86SG3 579 aaKnown RBP8.68□□□□□ -1.02
SCN3B-205ENST00000528267 NIT1Q86X76 327 aa8.68□□□□□ -1.02
SCN3B-205ENST00000528267 DAZ3Q9NR90 486 aaKnown RBP8.68□□□□□ -1.02
SCN3B-205ENST00000528267 TRAV8-6A0A0B4J262 113 aa8.67□□□□□ -1.02
SCN3B-205ENST00000528267 TRBV6-5A0A0K0K1A5 114 aa8.67□□□□□ -1.02
SCN3B-205ENST00000528267 SNRPEP62304 92 aaKnown RBP8.67□□□□□ -1.02
SCN3B-205ENST00000528267 C6orf223Q8N319 242 aa8.67□□□□□ -1.02
SCN3B-205ENST00000528267 C5orf52A6NGY3 159 aa8.66□□□□□ -1.02
SCN3B-205ENST00000528267 TTC32Q5I0X7 151 aa8.66□□□□□ -1.02
SCN3B-205ENST00000528267 C1orf134Q5TEV5 83 aa8.66□□□□□ -1.02
SCN3B-205ENST00000528267 MRAP2Q96G30 205 aa8.66□□□□□ -1.02
SCN3B-205ENST00000528267 ALKBH7Q9BT30 221 aaPredicted RBP8.66□□□□□ -1.02
SCN3B-205ENST00000528267 A0A1B0GVY2 172 aa8.65□□□□□ -1.02
SCN3B-205ENST00000528267 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.02
SCN3B-205ENST00000528267 POLR2KP53803 58 aaKnown RBP8.65□□□□□ -1.02
SCN3B-205ENST00000528267 TNP2Q05952 138 aa8.65□□□□□ -1.02
SCN3B-205ENST00000528267 Q0VG73 95 aa8.65□□□□□ -1.02
SCN3B-205ENST00000528267 IQCJQ1A5X6 159 aa8.65□□□□□ -1.02
SCN3B-205ENST00000528267 MPV17L2Q567V2 206 aa8.65□□□□□ -1.02
SCN3B-205ENST00000528267 TMEM70Q9BUB7 260 aa8.65□□□□□ -1.02
SCN3B-205ENST00000528267 LOC105371267A0A1B0GV96 52 aa8.64□□□□□ -1.03
SCN3B-205ENST00000528267 D6R8Y8 96 aa8.64□□□□□ -1.03
SCN3B-205ENST00000528267 COA6Q5JTJ3 125 aaKnown RBP8.64□□□□□ -1.03
SCN3B-205ENST00000528267 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
SCN3B-205ENST00000528267 IBA57-AS1B1ANH7 110 aa8.63□□□□□ -1.03
SCN3B-205ENST00000528267 TSHBP01222 138 aa8.63□□□□□ -1.03
SCN3B-205ENST00000528267 NPYP01303 97 aa8.63□□□□□ -1.03
SCN3B-205ENST00000528267 GAGE6Q13070 117 aa8.63□□□□□ -1.03
SCN3B-205ENST00000528267 BAGE3Q86Y29 109 aa8.63□□□□□ -1.03
SCN3B-205ENST00000528267 Q8N976 141 aa8.63□□□□□ -1.03
SCN3B-205ENST00000528267 C18orf32Q8TCD1 76 aa8.63□□□□□ -1.03
SCN3B-205ENST00000528267 CHCHD7Q9BUK0 85 aa8.63□□□□□ -1.03
SCN3B-205ENST00000528267 IGHV1-24A0A0C4DH33 117 aa8.62□□□□□ -1.03
SCN3B-205ENST00000528267 PRSS29PA6NIE9 313 aa8.62□□□□□ -1.03
SCN3B-205ENST00000528267 PPBPP02775 128 aa8.62□□□□□ -1.03
SCN3B-205ENST00000528267 CKS2P33552 79 aa8.62□□□□□ -1.03
SCN3B-205ENST00000528267 ORMDL3Q8N138 153 aa8.62□□□□□ -1.03
SCN3B-205ENST00000528267 PRELID3AQ96N28 172 aa8.62□□□□□ -1.03
SCN3B-205ENST00000528267 CHCHD5Q9BSY4 110 aa8.62□□□□□ -1.03
SCN3B-205ENST00000528267 ST20Q9HBF5 79 aa8.62□□□□□ -1.03
SCN3B-205ENST00000528267 TRBV25-1A0A075B6N4 114 aa8.61□□□□□ -1.03
SCN3B-205ENST00000528267 TRBV27A0A0K0K1C4 114 aa8.61□□□□□ -1.03
SCN3B-205ENST00000528267 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
SCN3B-205ENST00000528267 SUMO2P61956 95 aaKnown RBP8.61□□□□□ -1.03
SCN3B-205ENST00000528267 TMEM97Q5BJF2 176 aa8.61□□□□□ -1.03
SCN3B-205ENST00000528267 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
SCN3B-205ENST00000528267 IGLV4-60A0A075B6I1 120 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.6□□□□□ -1.03
SCN3B-205ENST00000528267 IGKV2-29A2NJV5 120 aaPredicted RBP8.6□□□□□ -1.03
SCN3B-205ENST00000528267 I3L3M4 83 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 K7EP13 123 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 SERF1AO75920 110 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 ESDP10768 282 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 RBX1P62877 108 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 COTL1Q14019 142 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 PDZD11Q5EBL8 140 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 HIST3H2BBQ8N257 126 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 C10orf126Q8N4M7 172 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 C20orf203Q8NBC4 194 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 Q9HAA7 133 aa8.6□□□□□ -1.03
SCN3B-205ENST00000528267 TRAV9-2A0A087WT02 112 aa8.59□□□□□ -1.03
SCN3B-205ENST00000528267 BTF3P20290 206 aaKnown RBP8.59□□□□□ -1.03
SCN3B-205ENST00000528267 S100A2P29034 98 aa8.59□□□□□ -1.03
SCN3B-205ENST00000528267 AMTP48728 403 aa8.59□□□□□ -1.03
SCN3B-205ENST00000528267 LINC00310P59036 64 aa8.59□□□□□ -1.03
SCN3B-205ENST00000528267 ENHOQ6UWT2 76 aa8.59□□□□□ -1.03
SCN3B-205ENST00000528267 LAMTOR2Q9Y2Q5 125 aa8.59□□□□□ -1.03
SCN3B-205ENST00000528267 TMEM262E9PQX1 116 aa8.58□□□□□ -1.04
SCN3B-205ENST00000528267 NUPR1O60356 82 aa8.58□□□□□ -1.04
SCN3B-205ENST00000528267 PMCHP20382 165 aa8.58□□□□□ -1.04
SCN3B-205ENST00000528267 LAGE3Q14657 143 aa8.58□□□□□ -1.04
SCN3B-205ENST00000528267 MAPKAPK5-AS1Q8N8E1 139 aa8.58□□□□□ -1.04
SCN3B-205ENST00000528267 APOBP04114 4563 aaKnown RBP8.57□□□□□ -1.04
SCN3B-205ENST00000528267 A0A087WX48 190 aa8.57□□□□□ -1.04
SCN3B-205ENST00000528267 RPL32P62910 135 aaKnown RBP8.57□□□□□ -1.04
SCN3B-205ENST00000528267 WFDC2Q14508 124 aa8.57□□□□□ -1.04
SCN3B-205ENST00000528267 RNASEKQ6P5S7 137 aaKnown RBP8.57□□□□□ -1.04
SCN3B-205ENST00000528267 CLPSL2Q6UWE3 100 aa8.57□□□□□ -1.04
SCN3B-205ENST00000528267 UBE2WQ96B02 151 aa8.57□□□□□ -1.04
SCN3B-205ENST00000528267 C20orf78Q9BR46 151 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms